RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 OS9Q13438 667 aaPredicted RBP10.93□□□□□ -0.66
CRNKL1-202ENST00000377340 NGEFQ8N5V2 710 aa10.93□□□□□ -0.66
CRNKL1-202ENST00000377340 KIAA0556O60303 1618 aa10.93□□□□□ -0.66
CRNKL1-202ENST00000377340 C1orf141Q5JVX7 400 aa10.93□□□□□ -0.66
CRNKL1-202ENST00000377340 TEFQ10587 303 aa10.92□□□□□ -0.66
CRNKL1-202ENST00000377340 RAPGEF4Q8WZA2 1011 aa10.92□□□□□ -0.66
CRNKL1-202ENST00000377340 APBB1O00213 710 aa10.92□□□□□ -0.66
CRNKL1-202ENST00000377340 KIF7Q2M1P5 1343 aa10.92□□□□□ -0.66
CRNKL1-202ENST00000377340 PRDM11Q9NQV5 511 aa10.91□□□□□ -0.66
CRNKL1-202ENST00000377340 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
CRNKL1-202ENST00000377340 ROCK1Q13464 1354 aa10.91□□□□□ -0.66
CRNKL1-202ENST00000377340 DIAPH1O60610 1272 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-202ENST00000377340 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-202ENST00000377340 HSP90AA1P07900 732 aaKnown RBP10.9□□□□□ -0.66
CRNKL1-202ENST00000377340 GTF2E1P29083 439 aaPredicted RBP10.9□□□□□ -0.66
CRNKL1-202ENST00000377340 RPGRIP1LQ68CZ1 1315 aa10.9□□□□□ -0.66
CRNKL1-202ENST00000377340 ANKRD30BQ9BXX2 1392 aa10.9□□□□□ -0.66
CRNKL1-202ENST00000377340 CLUAP1Q96AJ1 413 aa10.9□□□□□ -0.66
CRNKL1-202ENST00000377340 DMRT2Q9Y5R5 561 aa10.9□□□□□ -0.66
CRNKL1-202ENST00000377340 PTPN23Q9H3S7 1636 aa10.9□□□□□ -0.67
CRNKL1-202ENST00000377340 TNRQ92752 1358 aa10.9□□□□□ -0.67
CRNKL1-202ENST00000377340 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 SLC4A10Q6U841 1118 aa10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 NECTIN2Q92692 538 aa10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 TCERG1O14776 1098 aaKnown RBP10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 MTHFSP49914 203 aa10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 NUDT16Q96DE0 195 aaKnown RBP10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 STK31Q9BXU1 1019 aa10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 PRKRIP1Q9H875 184 aaPredicted RBP10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
CRNKL1-202ENST00000377340 SYCP2Q9BX26 1530 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 APAF1O14727 1248 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 RTEL1-TNFRSF6BF6WH68 1400 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 A2MP01023 1474 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 ABCA5Q8WWZ7 1642 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 UPF2Q9HAU5 1272 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 NCKAP5LQ9HCH0 1330 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 CCER2I3L3R5 266 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 EIF2S2P20042 333 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 ZNF518AQ6AHZ1 1483 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 PBRM1Q86U86 1689 aa10.88□□□□□ -0.67
CRNKL1-202ENST00000377340 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-202ENST00000377340 TOM1L2Q6ZVM7 507 aa10.87□□□□□ -0.67
CRNKL1-202ENST00000377340 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
CRNKL1-202ENST00000377340 CHMP3Q9Y3E7 222 aa10.87□□□□□ -0.67
CRNKL1-202ENST00000377340 RGS3P49796 1198 aa10.87□□□□□ -0.67
CRNKL1-202ENST00000377340 KDM5BQ9UGL1 1544 aa10.86□□□□□ -0.67
CRNKL1-202ENST00000377340 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
CRNKL1-202ENST00000377340 MYBBP1AQ9BQG0 1328 aaKnown RBP10.86□□□□□ -0.67
CRNKL1-202ENST00000377340 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
CRNKL1-202ENST00000377340 TTC5Q8N0Z6 440 aa10.85□□□□□ -0.67
CRNKL1-202ENST00000377340 ZMYM3Q14202 1370 aa10.85□□□□□ -0.67
CRNKL1-202ENST00000377340 RRS1Q15050 365 aaKnown RBP10.85□□□□□ -0.67
CRNKL1-202ENST00000377340 PTPRKQ15262 1439 aa10.85□□□□□ -0.67
CRNKL1-202ENST00000377340 SMC4Q9NTJ3 1288 aa10.85□□□□□ -0.67
CRNKL1-202ENST00000377340 WASHC2AQ641Q2 1341 aa10.84□□□□□ -0.67
CRNKL1-202ENST00000377340 RIPK4P57078 832 aa10.84□□□□□ -0.67
CRNKL1-202ENST00000377340 LMOD3Q0VAK6 560 aa10.83□□□□□ -0.68
CRNKL1-202ENST00000377340 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
CRNKL1-202ENST00000377340 TAOK2Q9UL54 1235 aa10.83□□□□□ -0.68
CRNKL1-202ENST00000377340 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
CRNKL1-202ENST00000377340 CTTNBP2Q8WZ74 1663 aa10.83□□□□□ -0.68
CRNKL1-202ENST00000377340 CCDC7Q96M83 1385 aa10.83□□□□□ -0.68
CRNKL1-202ENST00000377340 NGLY1Q96IV0 654 aa10.83□□□□□ -0.68
CRNKL1-202ENST00000377340 NOS1P29475 1434 aa10.83□□□□□ -0.68
CRNKL1-202ENST00000377340 ABCC10Q5T3U5 1492 aa10.82□□□□□ -0.68
CRNKL1-202ENST00000377340 ITPRIPQ8IWB1 547 aa10.82□□□□□ -0.68
CRNKL1-202ENST00000377340 MAP3K1Q13233 1512 aa10.81□□□□□ -0.68
CRNKL1-202ENST00000377340 IPO8O15397 1037 aaKnown RBP10.81□□□□□ -0.68
CRNKL1-202ENST00000377340 ANP32AP39687 249 aaKnown RBP10.81□□□□□ -0.68
CRNKL1-202ENST00000377340 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
CRNKL1-202ENST00000377340 UHRF1BP1LA0JNW5 1464 aa10.81□□□□□ -0.68
CRNKL1-202ENST00000377340 B4GALNT3Q6L9W6 998 aa10.81□□□□□ -0.68
CRNKL1-202ENST00000377340 TOM1O60784 492 aa10.8□□□□□ -0.68
CRNKL1-202ENST00000377340 MS4A1P11836 297 aa10.8□□□□□ -0.68
CRNKL1-202ENST00000377340 KAT6BQ8WYB5 2073 aa10.8□□□□□ -0.68
CRNKL1-202ENST00000377340 RTL5Q5HYW3 569 aaPredicted RBP10.8□□□□□ -0.68
CRNKL1-202ENST00000377340 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
CRNKL1-202ENST00000377340 ERCC6L2Q5T890 1561 aa10.8□□□□□ -0.68
CRNKL1-202ENST00000377340 TAF7LQ5H9L4 462 aa10.8□□□□□ -0.68
CRNKL1-202ENST00000377340 RCAN3Q9UKA8 241 aa10.8□□□□□ -0.68
CRNKL1-202ENST00000377340 WASLO00401 505 aaPredicted RBP10.79□□□□□ -0.68
CRNKL1-202ENST00000377340 KCNA6P17658 529 aa10.79□□□□□ -0.68
CRNKL1-202ENST00000377340 NME9Q86XW9 330 aa10.79□□□□□ -0.68
CRNKL1-202ENST00000377340 KRT28Q7Z3Y7 464 aa10.78□□□□□ -0.68
CRNKL1-202ENST00000377340 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-202ENST00000377340 TMX4Q9H1E5 349 aaPredicted RBP10.78□□□□□ -0.68
CRNKL1-202ENST00000377340 PRKAR2BP31323 418 aa10.78□□□□□ -0.68
CRNKL1-202ENST00000377340 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-202ENST00000377340 C14orf93Q9H972 538 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-202ENST00000377340 FAM135AQ9P2D6 1515 aa10.78□□□□□ -0.68
CRNKL1-202ENST00000377340 CHRNA2Q15822 529 aa10.77□□□□□ -0.68
CRNKL1-202ENST00000377340 ZNF428Q96B54 188 aa10.77□□□□□ -0.68
CRNKL1-202ENST00000377340 CHD1O14646 1710 aa10.77□□□□□ -0.69
CRNKL1-202ENST00000377340 YEATS2Q9ULM3 1422 aa10.77□□□□□ -0.69
CRNKL1-202ENST00000377340 FBLN1P23142 703 aa10.77□□□□□ -0.69
CRNKL1-202ENST00000377340 PDE3BQ13370 1112 aa10.77□□□□□ -0.69
CRNKL1-202ENST00000377340 CHMP4AQ9BY43 222 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms