RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 MYO5BQ9ULV0 1848 aa32.88■■■□□ 2.85
SRM-201ENST00000376957 SETD5Q9C0A6 1442 aa32.88■■■□□ 2.85
SRM-201ENST00000376957 ZNF326Q5BKZ1 582 aaKnown RBP32.84■■■□□ 2.85
SRM-201ENST00000376957 ZFYVE9O95405 1425 aa32.84■■■□□ 2.85
SRM-201ENST00000376957 TRPM2O94759 1503 aa32.83■■■□□ 2.85
SRM-201ENST00000376957 PLEKHG1Q9ULL1 1385 aa32.82■■■□□ 2.84
SRM-201ENST00000376957 UBAP1LF5GYI3 381 aa32.81■■■□□ 2.84
SRM-201ENST00000376957 SLC26A8Q96RN1 970 aa32.81■■■□□ 2.84
SRM-201ENST00000376957 MPHOSPH9Q99550 1183 aa32.79■■■□□ 2.84
SRM-201ENST00000376957 TOM1O60784 492 aa32.78■■■□□ 2.84
SRM-201ENST00000376957 KIF1BO60333 1816 aa32.77■■■□□ 2.84
SRM-201ENST00000376957 KCNA6P17658 529 aa32.74■■■□□ 2.83
SRM-201ENST00000376957 CLTCL1P53675 1640 aa32.73■■■□□ 2.83
SRM-201ENST00000376957 NUTM2DQ5VT03 806 aaPredicted RBP32.73■■■□□ 2.83
SRM-201ENST00000376957 TBX22Q9Y458 520 aa32.72■■■□□ 2.83
SRM-201ENST00000376957 RAB3GAP2Q9H2M9 1393 aa32.71■■■□□ 2.83
SRM-201ENST00000376957 SENP3Q9H4L4 574 aaPredicted RBP32.7■■■□□ 2.83
SRM-201ENST00000376957 STRCP1A6NGW2 1772 aa32.69■■■□□ 2.82
SRM-201ENST00000376957 LRRC7Q96NW7 1537 aa32.69■■■□□ 2.82
SRM-201ENST00000376957 CCDC144AA2RUR9 1427 aa32.68■■■□□ 2.82
SRM-201ENST00000376957 FOXD1Q16676 465 aa32.67■■■□□ 2.82
SRM-201ENST00000376957 HRCP23327 699 aa32.66■■■□□ 2.82
SRM-201ENST00000376957 DIP2AQ14689 1571 aa32.66■■■□□ 2.82
SRM-201ENST00000376957 RPGRIP1LQ68CZ1 1315 aa32.65■■■□□ 2.82
SRM-201ENST00000376957 VGFO15240 615 aaPredicted RBP32.64■■■□□ 2.82
SRM-201ENST00000376957 PROSER2Q86WR7 435 aaPredicted RBP32.64■■■□□ 2.82
SRM-201ENST00000376957 SCAF1Q9H7N4 1312 aaKnown RBP32.64■■■□□ 2.82
SRM-201ENST00000376957 PIK3R4Q99570 1358 aa32.61■■■□□ 2.81
SRM-201ENST00000376957 NKTRP30414 1462 aaKnown RBP32.61■■■□□ 2.81
SRM-201ENST00000376957 PIP4K2BP78356 416 aa32.59■■■□□ 2.81
SRM-201ENST00000376957 ADAMTS13Q76LX8 1427 aa32.57■■■□□ 2.8
SRM-201ENST00000376957 NWD1Q149M9 1564 aa32.57■■■□□ 2.8
SRM-201ENST00000376957 CHD2O14647 1828 aaKnown RBP32.56■■■□□ 2.8
SRM-201ENST00000376957 NEXMIFQ5QGS0 1516 aa32.56■■■□□ 2.8
SRM-201ENST00000376957 TMEM94Q12767 1356 aa32.55■■■□□ 2.8
SRM-201ENST00000376957 SETBP1Q9Y6X0 1596 aa32.53■■■□□ 2.8
SRM-201ENST00000376957 RGL3Q3MIN7 710 aa32.48■■■□□ 2.79
SRM-201ENST00000376957 AMOTL2Q9Y2J4 779 aa32.48■■■□□ 2.79
SRM-201ENST00000376957 MSH6P52701 1360 aa32.47■■■□□ 2.79
SRM-201ENST00000376957 C14orf37Q86TY3 774 aa32.47■■■□□ 2.79
SRM-201ENST00000376957 NCOA3Q9Y6Q9 1424 aa32.46■■■□□ 2.79
SRM-201ENST00000376957 XIRP1Q702N8 1843 aaKnown RBP32.46■■■□□ 2.79
SRM-201ENST00000376957 ANKRD30BQ9BXX2 1392 aa32.45■■■□□ 2.78
SRM-201ENST00000376957 PPLO60437 1756 aa32.43■■■□□ 2.78
SRM-201ENST00000376957 NRXN3Q9Y4C0 1643 aa32.43■■■□□ 2.78
SRM-201ENST00000376957 RBM33Q96EV2 1170 aaKnown RBP32.42■■■□□ 2.78
SRM-201ENST00000376957 SPATA31E1Q6ZUB1 1445 aa32.41■■■□□ 2.78
SRM-201ENST00000376957 METP08581 1390 aa32.37■■■□□ 2.77
SRM-201ENST00000376957 C19orf44Q9H6X5 657 aa32.35■■■□□ 2.77
SRM-201ENST00000376957 PTPRUQ92729 1446 aa32.34■■■□□ 2.77
SRM-201ENST00000376957 ALKQ9UM73 1620 aa32.33■■■□□ 2.77
SRM-201ENST00000376957 ATF3P18847 181 aa32.33■■■□□ 2.77
SRM-201ENST00000376957 HSPA1LP34931 641 aa32.33■■■□□ 2.77
SRM-201ENST00000376957 CADPS2Q86UW7 1296 aa32.32■■■□□ 2.76
SRM-201ENST00000376957 XRN1Q8IZH2 1706 aaKnown RBP32.3■■■□□ 2.76
SRM-201ENST00000376957 SLAIN2Q9P270 581 aa32.3■■■□□ 2.76
SRM-201ENST00000376957 ADGRF5Q8IZF2 1346 aa32.28■■■□□ 2.76
SRM-201ENST00000376957 FAM135BQ49AJ0 1406 aa32.28■■■□□ 2.76
SRM-201ENST00000376957 IFT172Q9UG01 1749 aa32.28■■■□□ 2.76
SRM-201ENST00000376957 STAC3Q96MF2 364 aa32.24■■■□□ 2.75
SRM-201ENST00000376957 SETD1AO15047 1707 aaKnown RBP32.21■■■□□ 2.75
SRM-201ENST00000376957 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.2■■■□□ 2.75
SRM-201ENST00000376957 DCCP43146 1447 aa32.2■■■□□ 2.75
SRM-201ENST00000376957 PIK3C2GO75747 1445 aa32.19■■■□□ 2.74
SRM-201ENST00000376957 PTCH1Q13635 1447 aa32.19■■■□□ 2.74
SRM-201ENST00000376957 MYOM2P54296 1465 aa32.19■■■□□ 2.74
SRM-201ENST00000376957 TRIM26Q12899 539 aaPredicted RBP32.18■■■□□ 2.74
SRM-201ENST00000376957 ROBO1Q9Y6N7 1651 aa32.17■■■□□ 2.74
SRM-201ENST00000376957 DCAF11Q8TEB1 546 aa32.14■■■□□ 2.74
SRM-201ENST00000376957 PRAG1Q86YV5 1406 aa32.14■■■□□ 2.74
SRM-201ENST00000376957 C14orf93Q9H972 538 aaKnown RBP32.13■■■□□ 2.73
SRM-201ENST00000376957 ADGRL3Q9HAR2 1447 aa32.13■■■□□ 2.73
SRM-201ENST00000376957 LAMC1P11047 1609 aa32.12■■■□□ 2.73
SRM-201ENST00000376957 DISP3Q9P2K9 1392 aa32.12■■■□□ 2.73
SRM-201ENST00000376957 KDM2AQ9Y2K7 1162 aa32.12■■■□□ 2.73
SRM-201ENST00000376957 STK26Q9P289 416 aa32.11■■■□□ 2.73
SRM-201ENST00000376957 NRXN1Q9ULB1 1477 aa32.1■■■□□ 2.73
SRM-201ENST00000376957 DHX57Q6P158 1386 aaKnown RBP32.1■■■□□ 2.73
SRM-201ENST00000376957 ROBO2Q9HCK4 1378 aa32.1■■■□□ 2.73
SRM-201ENST00000376957 LRPPRCP42704 1394 aaKnown RBP32.09■■■□□ 2.73
SRM-201ENST00000376957 TMEM132EQ6IEE7 984 aa32.08■■■□□ 2.73
SRM-201ENST00000376957 ABCC11Q96J66 1382 aa32.07■■■□□ 2.73
SRM-201ENST00000376957 CFAP70Q5T0N1 1121 aa32.06■■■□□ 2.72
SRM-201ENST00000376957 TECPR2O15040 1411 aa32.04■■■□□ 2.72
SRM-201ENST00000376957 YTHDC2Q9H6S0 1430 aaKnown RBP32.04■■■□□ 2.72
SRM-201ENST00000376957 NALCNQ8IZF0 1738 aa32.03■■■□□ 2.72
SRM-201ENST00000376957 SIRT1Q96EB6 747 aa32.01■■■□□ 2.71
SRM-201ENST00000376957 PHLPP1O60346 1717 aa32■■■□□ 2.71
SRM-201ENST00000376957 KNDC1Q76NI1 1749 aa32■■■□□ 2.71
SRM-201ENST00000376957 MST1RQ04912 1400 aa32■■■□□ 2.71
SRM-201ENST00000376957 BRINP3Q76B58 766 aa31.98■■■□□ 2.71
SRM-201ENST00000376957 WAPLQ7Z5K2 1190 aa31.96■■■□□ 2.71
SRM-201ENST00000376957 ASXL1Q8IXJ9 1541 aa31.95■■■□□ 2.71
SRM-201ENST00000376957 PHF23Q9BUL5 403 aaPredicted RBP31.94■■■□□ 2.7
SRM-201ENST00000376957 MED1Q15648 1581 aaPredicted RBP31.93■■■□□ 2.7
SRM-201ENST00000376957 POGKQ9P215 609 aa31.92■■■□□ 2.7
SRM-201ENST00000376957 JCADQ9P266 1359 aa31.92■■■□□ 2.7
SRM-201ENST00000376957 AHDC1Q5TGY3 1603 aaPredicted RBP31.91■■■□□ 2.7
SRM-201ENST00000376957 C1orf167Q5SNV9 1468 aa31.91■■■□□ 2.7
SRM-201ENST00000376957 CDC42BPGQ6DT37 1551 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms