RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ERBINQ96RT1 1412 aa14.96□□□□□ -0.02
TM9SF2-201ENST00000376387 FAM135AQ9P2D6 1515 aa14.95□□□□□ -0.02
TM9SF2-201ENST00000376387 A2MP01023 1474 aa14.95□□□□□ -0.02
TM9SF2-201ENST00000376387 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
TM9SF2-201ENST00000376387 CCDC144AA2RUR9 1427 aa14.95□□□□□ -0.02
TM9SF2-201ENST00000376387 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
TM9SF2-201ENST00000376387 CARMIL2Q6F5E8 1435 aa14.94□□□□□ -0.02
TM9SF2-201ENST00000376387 PLA2R1Q13018 1463 aa14.94□□□□□ -0.02
TM9SF2-201ENST00000376387 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
TM9SF2-201ENST00000376387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
TM9SF2-201ENST00000376387 ABCC10Q5T3U5 1492 aa14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 INSRP06213 1382 aa14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 NAP1L5Q96NT1 182 aaPredicted RBP14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 PRDM15P57071 1507 aaPredicted RBP14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 GPRASP1Q5JY77 1395 aa14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 PPP2R1AP30153 589 aa14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 CCDC146Q8IYE0 955 aa14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 ZNF521Q96K83 1311 aa14.93□□□□□ -0.02
TM9SF2-201ENST00000376387 PLEKHD1A6NEE1 506 aa14.92□□□□□ -0.02
TM9SF2-201ENST00000376387 MAGI2Q86UL8 1455 aa14.92□□□□□ -0.02
TM9SF2-201ENST00000376387 BCAR3O75815 825 aa14.92□□□□□ -0.02
TM9SF2-201ENST00000376387 SEC24BO95487 1268 aa14.92□□□□□ -0.02
TM9SF2-201ENST00000376387 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
TM9SF2-201ENST00000376387 IGHDP01880 384 aa14.91□□□□□ -0.02
TM9SF2-201ENST00000376387 WDR43Q15061 677 aaKnown RBP eCLIP14.91□□□□□ -0.02
TM9SF2-201ENST00000376387 USP19O94966 1318 aa14.91□□□□□ -0.02
TM9SF2-201ENST00000376387 TMF1P82094 1093 aa14.91□□□□□ -0.02
TM9SF2-201ENST00000376387 MYO5CQ9NQX4 1742 aa14.9□□□□□ -0.02
TM9SF2-201ENST00000376387 POGKQ9P215 609 aa14.9□□□□□ -0.02
TM9SF2-201ENST00000376387 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
TM9SF2-201ENST00000376387 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
TM9SF2-201ENST00000376387 ATP10BO94823 1461 aa14.88□□□□□ -0.03
TM9SF2-201ENST00000376387 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
TM9SF2-201ENST00000376387 WDR7Q9Y4E6 1490 aa14.87□□□□□ -0.03
TM9SF2-201ENST00000376387 KNSTRNQ9Y448 316 aa14.86□□□□□ -0.03
TM9SF2-201ENST00000376387 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.86□□□□□ -0.03
TM9SF2-201ENST00000376387 LAMC1P11047 1609 aa14.86□□□□□ -0.03
TM9SF2-201ENST00000376387 SLKQ9H2G2 1235 aaPredicted RBP14.85□□□□□ -0.03
TM9SF2-201ENST00000376387 ABCA8O94911 1581 aa14.85□□□□□ -0.03
TM9SF2-201ENST00000376387 APAF1O14727 1248 aa14.85□□□□□ -0.03
TM9SF2-201ENST00000376387 GLIPR1L2Q4G1C9 344 aa14.85□□□□□ -0.03
TM9SF2-201ENST00000376387 TRMT2AQ8IZ69 625 aaKnown RBP14.84□□□□□ -0.03
TM9SF2-201ENST00000376387 SAMD9LQ8IVG5 1584 aa14.84□□□□□ -0.03
TM9SF2-201ENST00000376387 FAM43AQ8N2R8 423 aa14.84□□□□□ -0.03
TM9SF2-201ENST00000376387 ARHGEF5Q12774 1597 aa14.83□□□□□ -0.04
TM9SF2-201ENST00000376387 VIRMAQ69YN4 1812 aaKnown RBP14.83□□□□□ -0.04
TM9SF2-201ENST00000376387 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
TM9SF2-201ENST00000376387 EIF3AQ14152 1382 aaKnown RBP14.82□□□□□ -0.04
TM9SF2-201ENST00000376387 CCDC141Q6ZP82 1450 aa14.82□□□□□ -0.04
TM9SF2-201ENST00000376387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
TM9SF2-201ENST00000376387 PANK1Q8TE04 598 aa14.81□□□□□ -0.04
TM9SF2-201ENST00000376387 CHMP4BQ9H444 224 aaKnown RBP14.81□□□□□ -0.04
TM9SF2-201ENST00000376387 RRAGDQ9NQL2 400 aaPredicted RBP14.81□□□□□ -0.04
TM9SF2-201ENST00000376387 CDC42BPBQ9Y5S2 1711 aa14.81□□□□□ -0.04
TM9SF2-201ENST00000376387 NKTRP30414 1462 aaKnown RBP14.8□□□□□ -0.04
TM9SF2-201ENST00000376387 COG6Q9Y2V7 657 aa14.8□□□□□ -0.04
TM9SF2-201ENST00000376387 EIF2AK4Q9P2K8 1649 aaKnown RBP14.79□□□□□ -0.04
TM9SF2-201ENST00000376387 NLRP1Q9C000 1473 aa14.79□□□□□ -0.04
TM9SF2-201ENST00000376387 UNC13BO14795 1591 aa14.78□□□□□ -0.04
TM9SF2-201ENST00000376387 RNF17Q9BXT8 1623 aaKnown RBP14.78□□□□□ -0.04
TM9SF2-201ENST00000376387 RSPH6AQ9H0K4 717 aa14.77□□□□□ -0.04
TM9SF2-201ENST00000376387 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.04
TM9SF2-201ENST00000376387 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.05
TM9SF2-201ENST00000376387 ANTXR1Q9H6X2 564 aa14.76□□□□□ -0.05
TM9SF2-201ENST00000376387 TNNQ9UQP3 1299 aa14.76□□□□□ -0.05
TM9SF2-201ENST00000376387 SPRYD3Q8NCJ5 442 aa14.76□□□□□ -0.05
TM9SF2-201ENST00000376387 ASXL1Q8IXJ9 1541 aa14.76□□□□□ -0.05
TM9SF2-201ENST00000376387 CLUAP1Q96AJ1 413 aa14.75□□□□□ -0.05
TM9SF2-201ENST00000376387 PIK3C2GO75747 1445 aa14.75□□□□□ -0.05
TM9SF2-201ENST00000376387 IQGAP3Q86VI3 1631 aa14.74□□□□□ -0.05
TM9SF2-201ENST00000376387 E9PSI1 815 aa14.74□□□□□ -0.05
TM9SF2-201ENST00000376387 CDK11BP21127 795 aaKnown RBP14.74□□□□□ -0.05
TM9SF2-201ENST00000376387 MYOM1P52179 1685 aa14.74□□□□□ -0.05
TM9SF2-201ENST00000376387 PREX2Q70Z35 1606 aa14.74□□□□□ -0.05
TM9SF2-201ENST00000376387 IQGAP1P46940 1657 aa14.73□□□□□ -0.05
TM9SF2-201ENST00000376387 CANXP27824 592 aaKnown RBP14.73□□□□□ -0.05
TM9SF2-201ENST00000376387 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
TM9SF2-201ENST00000376387 SYNMO15061 1565 aa14.73□□□□□ -0.05
TM9SF2-201ENST00000376387 BECN1Q14457 450 aa14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 TBC1D2Q9BYX2 928 aa14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 ERCC6L2Q5T890 1561 aa14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 PCDHB15Q9Y5E8 787 aa14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 CENPJQ9HC77 1338 aaPredicted RBP14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 ABCC2Q92887 1545 aa14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 MADDQ8WXG6 1647 aa14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 CGNL1Q0VF96 1302 aa14.72□□□□□ -0.05
TM9SF2-201ENST00000376387 MAPK8IP3Q9UPT6 1336 aa14.71□□□□□ -0.05
TM9SF2-201ENST00000376387 RLBP1P12271 317 aa14.71□□□□□ -0.05
TM9SF2-201ENST00000376387 GZF1Q9H116 711 aaPredicted RBP14.71□□□□□ -0.05
TM9SF2-201ENST00000376387 RRP7AQ9Y3A4 280 aaKnown RBP14.71□□□□□ -0.05
TM9SF2-201ENST00000376387 PDE3AQ14432 1141 aa14.7□□□□□ -0.06
TM9SF2-201ENST00000376387 BCL2L13Q9BXK5 485 aa14.7□□□□□ -0.06
TM9SF2-201ENST00000376387 PANK2Q9BZ23 570 aa14.7□□□□□ -0.06
TM9SF2-201ENST00000376387 CARD14Q9BXL6 1004 aa14.7□□□□□ -0.06
TM9SF2-201ENST00000376387 XRCC6P12956 609 aaKnown RBP eCLIP14.69□□□□□ -0.06
TM9SF2-201ENST00000376387 WWC1Q8IX03 1113 aa14.69□□□□□ -0.06
TM9SF2-201ENST00000376387 ARHGAP5Q13017 1502 aa14.69□□□□□ -0.06
TM9SF2-201ENST00000376387 TBC1D32Q96NH3 1257 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms