RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 KDM4FA0A1W2PPD8 638 aa17.56■□□□□ 0.4
SDHD-201ENST00000375549 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
SDHD-201ENST00000375549 RPGRIP1LQ68CZ1 1315 aa17.55■□□□□ 0.4
SDHD-201ENST00000375549 NBPF8Q3BBV2 869 aa17.55■□□□□ 0.4
SDHD-201ENST00000375549 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
SDHD-201ENST00000375549 A2ML1A8K2U0 1454 aa17.53■□□□□ 0.4
SDHD-201ENST00000375549 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
SDHD-201ENST00000375549 STAC3Q96MF2 364 aa17.52■□□□□ 0.4
SDHD-201ENST00000375549 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
SDHD-201ENST00000375549 UHRF1BP1Q6BDS2 1440 aa17.51■□□□□ 0.39
SDHD-201ENST00000375549 MYO3AQ8NEV4 1616 aa17.49■□□□□ 0.39
SDHD-201ENST00000375549 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
SDHD-201ENST00000375549 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
SDHD-201ENST00000375549 VGFO15240 615 aaPredicted RBP17.48■□□□□ 0.39
SDHD-201ENST00000375549 NEXMIFQ5QGS0 1516 aa17.48■□□□□ 0.39
SDHD-201ENST00000375549 MYOM2P54296 1465 aa17.48■□□□□ 0.39
SDHD-201ENST00000375549 RIMS2Q9UQ26 1411 aa17.48■□□□□ 0.39
SDHD-201ENST00000375549 THEMISQ8N1K5 641 aaPredicted RBP17.47■□□□□ 0.39
SDHD-201ENST00000375549 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
SDHD-201ENST00000375549 UBR1Q8IWV7 1749 aa17.46■□□□□ 0.39
SDHD-201ENST00000375549 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
SDHD-201ENST00000375549 IFT172Q9UG01 1749 aa17.45■□□□□ 0.38
SDHD-201ENST00000375549 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
SDHD-201ENST00000375549 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
SDHD-201ENST00000375549 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
SDHD-201ENST00000375549 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
SDHD-201ENST00000375549 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
SDHD-201ENST00000375549 PPLO60437 1756 aa17.44■□□□□ 0.38
SDHD-201ENST00000375549 KDM5AP29375 1690 aaKnown RBP17.44■□□□□ 0.38
SDHD-201ENST00000375549 ZFYVE9O95405 1425 aa17.43■□□□□ 0.38
SDHD-201ENST00000375549 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
SDHD-201ENST00000375549 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
SDHD-201ENST00000375549 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
SDHD-201ENST00000375549 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
SDHD-201ENST00000375549 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
SDHD-201ENST00000375549 EID1Q9Y6B2 187 aa17.41■□□□□ 0.38
SDHD-201ENST00000375549 PIK3C2GO75747 1445 aa17.4■□□□□ 0.38
SDHD-201ENST00000375549 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
SDHD-201ENST00000375549 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
SDHD-201ENST00000375549 ZNF142P52746 1687 aaPredicted RBP17.39■□□□□ 0.38
SDHD-201ENST00000375549 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.37
SDHD-201ENST00000375549 SLIT1O75093 1534 aa17.38■□□□□ 0.37
SDHD-201ENST00000375549 LTKP29376 864 aa17.38■□□□□ 0.37
SDHD-201ENST00000375549 BCANQ96GW7 911 aa17.38■□□□□ 0.37
SDHD-201ENST00000375549 ARHGAP23Q9P227 1491 aa17.38■□□□□ 0.37
SDHD-201ENST00000375549 C14orf93Q9H972 538 aaKnown RBP17.38■□□□□ 0.37
SDHD-201ENST00000375549 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
SDHD-201ENST00000375549 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
SDHD-201ENST00000375549 ANKLE2Q86XL3 938 aa17.35■□□□□ 0.37
SDHD-201ENST00000375549 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
SDHD-201ENST00000375549 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
SDHD-201ENST00000375549 SCAF11Q99590 1463 aaKnown RBP17.33■□□□□ 0.37
SDHD-201ENST00000375549 PLEKHG1Q9ULL1 1385 aa17.33■□□□□ 0.37
SDHD-201ENST00000375549 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.36
SDHD-201ENST00000375549 TMEM132EQ6IEE7 984 aa17.33■□□□□ 0.36
SDHD-201ENST00000375549 KIAA1210Q9ULL0 1709 aa17.32■□□□□ 0.36
SDHD-201ENST00000375549 USP47Q96K76 1375 aa17.32■□□□□ 0.36
SDHD-201ENST00000375549 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
SDHD-201ENST00000375549 ALKQ9UM73 1620 aa17.3■□□□□ 0.36
SDHD-201ENST00000375549 HSPA2P54652 639 aa17.3■□□□□ 0.36
SDHD-201ENST00000375549 LAMC1P11047 1609 aa17.29■□□□□ 0.36
SDHD-201ENST00000375549 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
SDHD-201ENST00000375549 NCKAP5LQ9HCH0 1330 aa17.29■□□□□ 0.36
SDHD-201ENST00000375549 SLC26A8Q96RN1 970 aa17.29■□□□□ 0.36
SDHD-201ENST00000375549 ADGRB1O14514 1584 aa17.27■□□□□ 0.36
SDHD-201ENST00000375549 LMTK3Q96Q04 1460 aa17.27■□□□□ 0.36
SDHD-201ENST00000375549 NRXN3Q9Y4C0 1643 aa17.27■□□□□ 0.36
SDHD-201ENST00000375549 STK26Q9P289 416 aa17.27■□□□□ 0.35
SDHD-201ENST00000375549 TRAK1Q9UPV9 953 aa17.27■□□□□ 0.35
SDHD-201ENST00000375549 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
SDHD-201ENST00000375549 ST20-MTHFSA0A0A6YYL1 179 aa17.26■□□□□ 0.35
SDHD-201ENST00000375549 IQGAP1P46940 1657 aa17.26■□□□□ 0.35
SDHD-201ENST00000375549 ASXL1Q8IXJ9 1541 aa17.25■□□□□ 0.35
SDHD-201ENST00000375549 METP08581 1390 aa17.25■□□□□ 0.35
SDHD-201ENST00000375549 TBX22Q9Y458 520 aa17.24■□□□□ 0.35
SDHD-201ENST00000375549 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
SDHD-201ENST00000375549 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
SDHD-201ENST00000375549 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
SDHD-201ENST00000375549 MED14O60244 1454 aa17.22■□□□□ 0.35
SDHD-201ENST00000375549 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
SDHD-201ENST00000375549 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.35
SDHD-201ENST00000375549 DIP2AQ14689 1571 aa17.2■□□□□ 0.34
SDHD-201ENST00000375549 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
SDHD-201ENST00000375549 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
SDHD-201ENST00000375549 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
SDHD-201ENST00000375549 POGKQ9P215 609 aa17.17■□□□□ 0.34
SDHD-201ENST00000375549 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
SDHD-201ENST00000375549 SAFB2Q14151 953 aaKnown RBP eCLIP17.16■□□□□ 0.34
SDHD-201ENST00000375549 PRAM1Q96QH2 718 aa17.16■□□□□ 0.34
SDHD-201ENST00000375549 TESK2Q96S53 571 aa17.16■□□□□ 0.34
SDHD-201ENST00000375549 AMOTL2Q9Y2J4 779 aa17.16■□□□□ 0.34
SDHD-201ENST00000375549 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
SDHD-201ENST00000375549 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
SDHD-201ENST00000375549 PIK3R4Q99570 1358 aa17.14■□□□□ 0.33
SDHD-201ENST00000375549 TMF1P82094 1093 aa17.13■□□□□ 0.33
SDHD-201ENST00000375549 WAPLQ7Z5K2 1190 aa17.13■□□□□ 0.33
SDHD-201ENST00000375549 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
SDHD-201ENST00000375549 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
SDHD-201ENST00000375549 ARHGEF28Q8N1W1 1705 aaKnown RBP17.12■□□□□ 0.33
SDHD-201ENST00000375549 SIRT1Q96EB6 747 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms