RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 AMPHP49418 695 aa14.24□□□□□ -0.13
PTCH1-203ENST00000375274 REC8O95072 547 aa14.24□□□□□ -0.13
PTCH1-203ENST00000375274 SMG6Q86US8 1419 aaKnown RBP14.23□□□□□ -0.13
PTCH1-203ENST00000375274 MINK1Q8N4C8 1332 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-203ENST00000375274 NUTM2FA1L443 756 aa14.23□□□□□ -0.13
PTCH1-203ENST00000375274 FOXD4L6Q3SYB3 417 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-203ENST00000375274 FOXD4L3Q6VB84 417 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-203ENST00000375274 NGDNQ8NEJ9 315 aaKnown RBP14.23□□□□□ -0.13
PTCH1-203ENST00000375274 API5Q9BZZ5 524 aaKnown RBP14.23□□□□□ -0.13
PTCH1-203ENST00000375274 FRAT2O75474 233 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-203ENST00000375274 PPP2R1AP30153 589 aa14.22□□□□□ -0.13
PTCH1-203ENST00000375274 NBPF1Q3BBV0 1214 aa14.22□□□□□ -0.13
PTCH1-203ENST00000375274 TIAM1Q13009 1591 aa14.22□□□□□ -0.13
PTCH1-203ENST00000375274 COG3Q96JB2 828 aa14.22□□□□□ -0.13
PTCH1-203ENST00000375274 ATP6V1DQ9Y5K8 247 aa14.21□□□□□ -0.13
PTCH1-203ENST00000375274 TCP11L2Q8N4U5 519 aa14.21□□□□□ -0.14
PTCH1-203ENST00000375274 HSP90B1P14625 803 aaKnown RBP14.2□□□□□ -0.14
PTCH1-203ENST00000375274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTCH1-203ENST00000375274 PDE3AQ14432 1141 aa14.19□□□□□ -0.14
PTCH1-203ENST00000375274 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
PTCH1-203ENST00000375274 BRPF3Q9ULD4 1205 aa14.19□□□□□ -0.14
PTCH1-203ENST00000375274 LTV1Q96GA3 475 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-203ENST00000375274 MTHFSP49914 203 aa14.18□□□□□ -0.14
PTCH1-203ENST00000375274 NUCB2P80303 420 aa14.18□□□□□ -0.14
PTCH1-203ENST00000375274 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
PTCH1-203ENST00000375274 TPM4P67936 248 aa14.18□□□□□ -0.14
PTCH1-203ENST00000375274 TOP2BQ02880 1626 aa14.18□□□□□ -0.14
PTCH1-203ENST00000375274 IL27Q8NEV9 243 aa14.18□□□□□ -0.14
PTCH1-203ENST00000375274 MRE11P49959 708 aa14.17□□□□□ -0.14
PTCH1-203ENST00000375274 MSH5O43196 834 aa14.17□□□□□ -0.14
PTCH1-203ENST00000375274 GORABQ5T7V8 394 aa14.17□□□□□ -0.14
PTCH1-203ENST00000375274 NAIPQ13075 1403 aa14.17□□□□□ -0.14
PTCH1-203ENST00000375274 NPHP1O15259 732 aa14.17□□□□□ -0.14
PTCH1-203ENST00000375274 CHMP3Q9Y3E7 222 aa14.17□□□□□ -0.14
PTCH1-203ENST00000375274 KIF3AQ9Y496 699 aa14.17□□□□□ -0.14
PTCH1-203ENST00000375274 FAM43AQ8N2R8 423 aa14.17□□□□□ -0.14
PTCH1-203ENST00000375274 ZNF330Q9Y3S2 320 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-203ENST00000375274 EFCAB5A4FU69 1503 aa14.16□□□□□ -0.14
PTCH1-203ENST00000375274 TULP1O00294 542 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-203ENST00000375274 BCAR3O75815 825 aa14.16□□□□□ -0.14
PTCH1-203ENST00000375274 CSB-PGBD3P0DP91 1061 aa14.16□□□□□ -0.14
PTCH1-203ENST00000375274 PDZRN3Q9UPQ7 1066 aa14.16□□□□□ -0.14
PTCH1-203ENST00000375274 GNAI1P63096 354 aa14.16□□□□□ -0.14
PTCH1-203ENST00000375274 GGNBP2Q9H3C7 697 aa14.16□□□□□ -0.14
PTCH1-203ENST00000375274 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.143e-7■■■□□ 17
PTCH1-203ENST00000375274 TRAK2O60296 914 aa14.15□□□□□ -0.14
PTCH1-203ENST00000375274 CFAP70Q5T0N1 1121 aa14.15□□□□□ -0.14
PTCH1-203ENST00000375274 INTS3Q68E01 1043 aaKnown RBP14.15□□□□□ -0.14
PTCH1-203ENST00000375274 ANO2Q9NQ90 1003 aa14.15□□□□□ -0.14
PTCH1-203ENST00000375274 DIAPH3Q9NSV4 1193 aa14.13□□□□□ -0.15
PTCH1-203ENST00000375274 ROCK1Q13464 1354 aa14.13□□□□□ -0.15
PTCH1-203ENST00000375274 C11orf95C9JLR9 678 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-203ENST00000375274 SF3A1Q15459 793 aaKnown RBP14.13□□□□□ -0.15
PTCH1-203ENST00000375274 EID1Q9Y6B2 187 aa14.13□□□□□ -0.15
PTCH1-203ENST00000375274 EHBP1L1Q8N3D4 1523 aa14.13□□□□□ -0.15
PTCH1-203ENST00000375274 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
PTCH1-203ENST00000375274 CCDC34Q96HJ3 373 aa14.13□□□□□ -0.15
PTCH1-203ENST00000375274 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-203ENST00000375274 HMOX1P09601 288 aa14.12□□□□□ -0.15
PTCH1-203ENST00000375274 TMEM132EQ6IEE7 984 aa14.12□□□□□ -0.15
PTCH1-203ENST00000375274 FAM13BQ9NYF5 915 aa14.12□□□□□ -0.15
PTCH1-203ENST00000375274 H3BQV1 296 aa14.11□□□□□ -0.15
PTCH1-203ENST00000375274 CDC45O75419 566 aa14.11□□□□□ -0.15
PTCH1-203ENST00000375274 IFFO2Q5TF58 517 aa14.11□□□□□ -0.15
PTCH1-203ENST00000375274 GOLGA6L19H0YKK7 550 aa14.11□□□□□ -0.15
PTCH1-203ENST00000375274 RUFY2Q8WXA3 655 aa14.11□□□□□ -0.15
PTCH1-203ENST00000375274 ZKSCAN1P17029 563 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-203ENST00000375274 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-203ENST00000375274 BECN2A8MW95 431 aa14.1□□□□□ -0.15
PTCH1-203ENST00000375274 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
PTCH1-203ENST00000375274 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
PTCH1-203ENST00000375274 FKBP5Q13451 457 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-203ENST00000375274 TAF7LQ5H9L4 462 aa14.1□□□□□ -0.15
PTCH1-203ENST00000375274 FAM184AQ8NB25 1140 aa14.1□□□□□ -0.15
PTCH1-203ENST00000375274 NASPP49321 788 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-203ENST00000375274 TEFQ10587 303 aa14.09□□□□□ -0.15
PTCH1-203ENST00000375274 CABP2Q9NPB3 220 aa14.09□□□□□ -0.15
PTCH1-203ENST00000375274 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
PTCH1-203ENST00000375274 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-203ENST00000375274 C9orf84Q5VXU9 1444 aa14.08□□□□□ -0.16
PTCH1-203ENST00000375274 NECTIN2Q92692 538 aa14.08□□□□□ -0.16
PTCH1-203ENST00000375274 EIF2S2P20042 333 aaKnown RBP14.07□□□□□ -0.16
PTCH1-203ENST00000375274 SLC12A5Q9H2X9 1139 aa14.07□□□□□ -0.16
PTCH1-203ENST00000375274 C9orf78Q9NZ63 289 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-203ENST00000375274 DAPK1P53355 1430 aa14.07□□□□□ -0.16
PTCH1-203ENST00000375274 TROQ12816 1431 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-203ENST00000375274 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
PTCH1-203ENST00000375274 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-203ENST00000375274 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-203ENST00000375274 GRIN2BQ13224 1484 aa14.05□□□□□ -0.16
PTCH1-203ENST00000375274 SMC3Q9UQE7 1217 aa14.05□□□□□ -0.16
PTCH1-203ENST00000375274 VPS37CA5D8V6 355 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-203ENST00000375274 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTCH1-203ENST00000375274 CHMP4CQ96CF2 233 aa14.05□□□□□ -0.16
PTCH1-203ENST00000375274 ANKRD30BQ9BXX2 1392 aa14.04□□□□□ -0.16
PTCH1-203ENST00000375274 IFIT2P09913 472 aaKnown RBP14.04□□□□□ -0.16
PTCH1-203ENST00000375274 TSPYL4Q9UJ04 414 aa14.04□□□□□ -0.16
PTCH1-203ENST00000375274 NINLQ9Y2I6 1382 aa14.04□□□□□ -0.16
PTCH1-203ENST00000375274 CAVIN1Q6NZI2 390 aaKnown RBP14.04□□□□□ -0.16
PTCH1-203ENST00000375274 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms