RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 MINK1Q8N4C8 1332 aaPredicted RBP15.34■□□□□ 0.05
NPLOC4-202ENST00000374747 SAMD9Q5K651 1589 aa15.33■□□□□ 0.05
NPLOC4-202ENST00000374747 ARHGEF11O15085 1522 aa15.33■□□□□ 0.04
NPLOC4-202ENST00000374747 MFAP1P55081 439 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-202ENST00000374747 USP35Q9P2H5 1018 aa15.33■□□□□ 0.04
NPLOC4-202ENST00000374747 NPHP1O15259 732 aa15.33■□□□□ 0.04
NPLOC4-202ENST00000374747 CCDC141Q6ZP82 1450 aa15.32■□□□□ 0.04
NPLOC4-202ENST00000374747 UGGT2Q9NYU1 1516 aa15.32■□□□□ 0.04
NPLOC4-202ENST00000374747 KIF14Q15058 1648 aa15.32■□□□□ 0.04
NPLOC4-202ENST00000374747 MSH5O43196 834 aa15.32■□□□□ 0.04
NPLOC4-202ENST00000374747 CHMP4AQ9BY43 222 aa15.32■□□□□ 0.04
NPLOC4-202ENST00000374747 KIF7Q2M1P5 1343 aa15.32■□□□□ 0.04
NPLOC4-202ENST00000374747 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
NPLOC4-202ENST00000374747 LMOD3Q0VAK6 560 aa15.31■□□□□ 0.04
NPLOC4-202ENST00000374747 NUTM2FA1L443 756 aa15.3■□□□□ 0.04
NPLOC4-202ENST00000374747 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
NPLOC4-202ENST00000374747 TPM4P67936 248 aa15.3■□□□□ 0.04
NPLOC4-202ENST00000374747 AMPHP49418 695 aa15.3■□□□□ 0.04
NPLOC4-202ENST00000374747 CAMSAP2Q08AD1 1489 aa15.3■□□□□ 0.04
NPLOC4-202ENST00000374747 COG3Q96JB2 828 aa15.29■□□□□ 0.04
NPLOC4-202ENST00000374747 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-202ENST00000374747 CCDC146Q8IYE0 955 aa15.29■□□□□ 0.04
NPLOC4-202ENST00000374747 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
NPLOC4-202ENST00000374747 ANKRD30BQ9BXX2 1392 aa15.29■□□□□ 0.04
NPLOC4-202ENST00000374747 HSP90AA2PQ14568 343 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-202ENST00000374747 CSPP1Q1MSJ5 1256 aa15.28■□□□□ 0.04
NPLOC4-202ENST00000374747 CNTLNQ9NXG0 1405 aa15.27■□□□□ 0.03
NPLOC4-202ENST00000374747 ABCC5O15440 1437 aa15.26■□□□□ 0.03
NPLOC4-202ENST00000374747 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
NPLOC4-202ENST00000374747 SLC52A1Q9NWF4 448 aa15.26■□□□□ 0.03
NPLOC4-202ENST00000374747 DDX11L8A8MPP1 907 aa15.25■□□□□ 0.03
NPLOC4-202ENST00000374747 GOLGA6L1Q8N7Z2 621 aa15.25■□□□□ 0.03
NPLOC4-202ENST00000374747 PHF14O94880 888 aa15.25■□□□□ 0.03
NPLOC4-202ENST00000374747 NOC3LQ8WTT2 800 aaKnown RBP15.25■□□□□ 0.03
NPLOC4-202ENST00000374747 CD109Q6YHK3 1445 aa15.25■□□□□ 0.03
NPLOC4-202ENST00000374747 CLSTN1O94985 981 aa15.25■□□□□ 0.03
NPLOC4-202ENST00000374747 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
NPLOC4-202ENST00000374747 AKNAQ7Z591 1439 aa15.24■□□□□ 0.03
NPLOC4-202ENST00000374747 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
NPLOC4-202ENST00000374747 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
NPLOC4-202ENST00000374747 CCDC34Q96HJ3 373 aa15.23■□□□□ 0.03
NPLOC4-202ENST00000374747 NGEFQ8N5V2 710 aa15.23■□□□□ 0.03
NPLOC4-202ENST00000374747 NCOA1Q15788 1441 aa15.22■□□□□ 0.03
NPLOC4-202ENST00000374747 HMMRO75330 724 aa15.22■□□□□ 0.03
NPLOC4-202ENST00000374747 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
NPLOC4-202ENST00000374747 STK31Q9BXU1 1019 aa15.22■□□□□ 0.03
NPLOC4-202ENST00000374747 GSE1Q14687 1217 aa15.21■□□□□ 0.03
NPLOC4-202ENST00000374747 TCOF1Q13428 1488 aaKnown RBP15.21■□□□□ 0.02
NPLOC4-202ENST00000374747 RPGRIP1LQ68CZ1 1315 aa15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 ST18O60284 1047 aa15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 KIF21AQ7Z4S6 1674 aa15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 ADGRL1O94910 1474 aa15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
NPLOC4-202ENST00000374747 RPRD2Q5VT52 1461 aaKnown RBP15.19■□□□□ 0.02
NPLOC4-202ENST00000374747 RAPGEF6Q8TEU7 1601 aa15.19■□□□□ 0.02
NPLOC4-202ENST00000374747 ISY1Q9ULR0 285 aaKnown RBP15.19■□□□□ 0.02
NPLOC4-202ENST00000374747 E9PSI1 815 aa15.18■□□□□ 0.02
NPLOC4-202ENST00000374747 NBPF1Q3BBV0 1214 aa15.18■□□□□ 0.02
NPLOC4-202ENST00000374747 LTV1Q96GA3 475 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-202ENST00000374747 HSP90B1P14625 803 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-202ENST00000374747 CLUAP1Q96AJ1 413 aa15.18■□□□□ 0.02
NPLOC4-202ENST00000374747 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-202ENST00000374747 DIAPH1O60610 1272 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-202ENST00000374747 PDE4AP27815 886 aa15.17■□□□□ 0.02
NPLOC4-202ENST00000374747 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
NPLOC4-202ENST00000374747 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
NPLOC4-202ENST00000374747 RRP7AQ9Y3A4 280 aaKnown RBP15.17■□□□□ 0.02
NPLOC4-202ENST00000374747 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
NPLOC4-202ENST00000374747 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-202ENST00000374747 HDAC5Q9UQL6 1122 aa15.16■□□□□ 0.02
NPLOC4-202ENST00000374747 POGZQ7Z3K3 1410 aa15.16■□□□□ 0.02
NPLOC4-202ENST00000374747 TXNDC2Q86VQ3 553 aa15.15■□□□□ 0.02
NPLOC4-202ENST00000374747 CABP2Q9NPB3 220 aa15.15■□□□□ 0.02
NPLOC4-202ENST00000374747 TEX14Q8IWB6 1497 aa15.15■□□□□ 0.02
NPLOC4-202ENST00000374747 NOL8Q76FK4 1167 aaKnown RBP15.15■□□□□ 0.02
NPLOC4-202ENST00000374747 ERBINQ96RT1 1412 aa15.15■□□□□ 0.02
NPLOC4-202ENST00000374747 WDR62O43379 1518 aa15.15■□□□□ 0.02
NPLOC4-202ENST00000374747 FANCIQ9NVI1 1328 aa15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 GPATCH8Q9UKJ3 1502 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 KIF16BQ96L93 1317 aa15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 APAF1O14727 1248 aa15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 VSIG10Q8N0Z9 540 aa15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 THEMISQ8N1K5 641 aaPredicted RBP15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 DDX49Q9Y6V7 483 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 DISP1Q96F81 1524 aa15.14■□□□□ 0.01
NPLOC4-202ENST00000374747 ATP10BO94823 1461 aa15.13■□□□□ 0.01
NPLOC4-202ENST00000374747 A0A0U1RQG5 324 aaPredicted RBP15.13■□□□□ 0.01
NPLOC4-202ENST00000374747 TPM3P06753 285 aa15.13■□□□□ 0.01
NPLOC4-202ENST00000374747 PSME1Q06323 249 aa15.13■□□□□ 0.01
NPLOC4-202ENST00000374747 KIF3AQ9Y496 699 aa15.13■□□□□ 0.01
NPLOC4-202ENST00000374747 FANCAO15360 1455 aa15.12■□□□□ 0.01
NPLOC4-202ENST00000374747 GORABQ5T7V8 394 aa15.11■□□□□ 0.01
NPLOC4-202ENST00000374747 RUNDC1Q96C34 613 aa15.11■□□□□ 0.01
NPLOC4-202ENST00000374747 KIAA0556O60303 1618 aa15.11■□□□□ 0.01
NPLOC4-202ENST00000374747 PRAM1Q96QH2 718 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms