RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 RIMS2Q9UQ26 1411 aa22.16■■□□□ 1.14
PFDN6-202ENST00000374607 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
PFDN6-202ENST00000374607 SLIT1O75093 1534 aa22.16■■□□□ 1.14
PFDN6-202ENST00000374607 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
PFDN6-202ENST00000374607 POLR1AO95602 1720 aaPredicted RBP22.14■■□□□ 1.14
PFDN6-202ENST00000374607 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
PFDN6-202ENST00000374607 LTKP29376 864 aa22.13■■□□□ 1.13
PFDN6-202ENST00000374607 ARHGAP23Q9P227 1491 aa22.13■■□□□ 1.13
PFDN6-202ENST00000374607 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
PFDN6-202ENST00000374607 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
PFDN6-202ENST00000374607 NPHP4O75161 1426 aaPredicted RBP22.11■■□□□ 1.13
PFDN6-202ENST00000374607 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
PFDN6-202ENST00000374607 FBXO41Q8TF61 875 aa22.08■■□□□ 1.13
PFDN6-202ENST00000374607 ZFYVE9O95405 1425 aa22.07■■□□□ 1.12
PFDN6-202ENST00000374607 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
PFDN6-202ENST00000374607 CERKQ8TCT0 537 aa22.07■■□□□ 1.12
PFDN6-202ENST00000374607 IQGAP1P46940 1657 aa22.05■■□□□ 1.12
PFDN6-202ENST00000374607 MED14O60244 1454 aa22.05■■□□□ 1.12
PFDN6-202ENST00000374607 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
PFDN6-202ENST00000374607 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
PFDN6-202ENST00000374607 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
PFDN6-202ENST00000374607 PLEKHG1Q9ULL1 1385 aa22.03■■□□□ 1.12
PFDN6-202ENST00000374607 NEXMIFQ5QGS0 1516 aa22.03■■□□□ 1.12
PFDN6-202ENST00000374607 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
PFDN6-202ENST00000374607 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
PFDN6-202ENST00000374607 DCAF11Q8TEB1 546 aa22.01■■□□□ 1.11
PFDN6-202ENST00000374607 PPLO60437 1756 aa21.99■■□□□ 1.11
PFDN6-202ENST00000374607 LTBP4Q8N2S1 1624 aa21.95■■□□□ 1.1
PFDN6-202ENST00000374607 STAC3Q96MF2 364 aa21.95■■□□□ 1.1
PFDN6-202ENST00000374607 ADGRF5Q8IZF2 1346 aa21.95■■□□□ 1.1
PFDN6-202ENST00000374607 ZNF335Q9H4Z2 1342 aaPredicted RBP21.95■■□□□ 1.1
PFDN6-202ENST00000374607 TONSLQ96HA7 1378 aa21.95■■□□□ 1.1
PFDN6-202ENST00000374607 TBX22Q9Y458 520 aa21.94■■□□□ 1.1
PFDN6-202ENST00000374607 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
PFDN6-202ENST00000374607 IFT172Q9UG01 1749 aa21.92■■□□□ 1.1
PFDN6-202ENST00000374607 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
PFDN6-202ENST00000374607 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
PFDN6-202ENST00000374607 SETBP1Q9Y6X0 1596 aa21.9■■□□□ 1.1
PFDN6-202ENST00000374607 MYOM2P54296 1465 aa21.9■■□□□ 1.1
PFDN6-202ENST00000374607 ADAMTS13Q76LX8 1427 aa21.88■■□□□ 1.09
PFDN6-202ENST00000374607 KCNA6P17658 529 aa21.86■■□□□ 1.09
PFDN6-202ENST00000374607 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
PFDN6-202ENST00000374607 IQSEC2Q5JU85 1478 aa21.85■■□□□ 1.09
PFDN6-202ENST00000374607 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
PFDN6-202ENST00000374607 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
PFDN6-202ENST00000374607 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
PFDN6-202ENST00000374607 PIK3R4Q99570 1358 aa21.84■■□□□ 1.09
PFDN6-202ENST00000374607 CFAP70Q5T0N1 1121 aa21.83■■□□□ 1.09
PFDN6-202ENST00000374607 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
PFDN6-202ENST00000374607 PROSER2Q86WR7 435 aaPredicted RBP21.82■■□□□ 1.08
PFDN6-202ENST00000374607 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
PFDN6-202ENST00000374607 METP08581 1390 aa21.82■■□□□ 1.08
PFDN6-202ENST00000374607 CPS1P31327 1500 aa21.81■■□□□ 1.08
PFDN6-202ENST00000374607 NRXN1Q9ULB1 1477 aa21.81■■□□□ 1.08
PFDN6-202ENST00000374607 TMEM132EQ6IEE7 984 aa21.8■■□□□ 1.08
PFDN6-202ENST00000374607 STK26Q9P289 416 aa21.8■■□□□ 1.08
PFDN6-202ENST00000374607 LAMC1P11047 1609 aa21.79■■□□□ 1.08
PFDN6-202ENST00000374607 C14orf37Q86TY3 774 aa21.78■■□□□ 1.08
PFDN6-202ENST00000374607 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
PFDN6-202ENST00000374607 TIMELESSQ9UNS1 1208 aa21.77■■□□□ 1.08
PFDN6-202ENST00000374607 PRAG1Q86YV5 1406 aa21.76■■□□□ 1.07
PFDN6-202ENST00000374607 NKTRP30414 1462 aaKnown RBP21.75■■□□□ 1.07
PFDN6-202ENST00000374607 NWD1Q149M9 1564 aa21.74■■□□□ 1.07
PFDN6-202ENST00000374607 STRCP1A6NGW2 1772 aa21.74■■□□□ 1.07
PFDN6-202ENST00000374607 PTPRUQ92729 1446 aa21.74■■□□□ 1.07
PFDN6-202ENST00000374607 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
PFDN6-202ENST00000374607 RBM33Q96EV2 1170 aaKnown RBP21.73■■□□□ 1.07
PFDN6-202ENST00000374607 LRRC7Q96NW7 1537 aa21.71■■□□□ 1.07
PFDN6-202ENST00000374607 UBAP1LF5GYI3 381 aa21.71■■□□□ 1.07
PFDN6-202ENST00000374607 YTHDC2Q9H6S0 1430 aaKnown RBP21.71■■□□□ 1.07
PFDN6-202ENST00000374607 LRPPRCP42704 1394 aaKnown RBP21.7■■□□□ 1.06
PFDN6-202ENST00000374607 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
PFDN6-202ENST00000374607 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
PFDN6-202ENST00000374607 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
PFDN6-202ENST00000374607 POGKQ9P215 609 aa21.68■■□□□ 1.06
PFDN6-202ENST00000374607 XRN1Q8IZH2 1706 aaKnown RBP21.68■■□□□ 1.06
PFDN6-202ENST00000374607 KIAA1210Q9ULL0 1709 aa21.68■■□□□ 1.06
PFDN6-202ENST00000374607 NBPF1Q3BBV0 1214 aa21.67■■□□□ 1.06
PFDN6-202ENST00000374607 NBPF8Q3BBV2 869 aa21.67■■□□□ 1.06
PFDN6-202ENST00000374607 ASXL1Q8IXJ9 1541 aa21.66■■□□□ 1.06
PFDN6-202ENST00000374607 MSH6P52701 1360 aa21.66■■□□□ 1.06
PFDN6-202ENST00000374607 ABCC11Q96J66 1382 aa21.66■■□□□ 1.06
PFDN6-202ENST00000374607 PTCH1Q13635 1447 aa21.64■■□□□ 1.06
PFDN6-202ENST00000374607 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
PFDN6-202ENST00000374607 TRPM1Q7Z4N2 1603 aa21.63■■□□□ 1.05
PFDN6-202ENST00000374607 ADGRB1O14514 1584 aa21.63■■□□□ 1.05
PFDN6-202ENST00000374607 SAFB2Q14151 953 aaKnown RBP eCLIP21.63■■□□□ 1.05
PFDN6-202ENST00000374607 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
PFDN6-202ENST00000374607 NCOA3Q9Y6Q9 1424 aa21.63■■□□□ 1.05
PFDN6-202ENST00000374607 TOM1O60784 492 aa21.62■■□□□ 1.05
PFDN6-202ENST00000374607 ATF3P18847 181 aa21.62■■□□□ 1.05
PFDN6-202ENST00000374607 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
PFDN6-202ENST00000374607 CARD11Q9BXL7 1154 aa21.62■■□□□ 1.05
PFDN6-202ENST00000374607 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
PFDN6-202ENST00000374607 KNDC1Q76NI1 1749 aa21.61■■□□□ 1.05
PFDN6-202ENST00000374607 C19orf44Q9H6X5 657 aa21.61■■□□□ 1.05
PFDN6-202ENST00000374607 TECPR2O15040 1411 aa21.61■■□□□ 1.05
PFDN6-202ENST00000374607 SIRT1Q96EB6 747 aa21.6■■□□□ 1.05
PFDN6-202ENST00000374607 FAM135BQ49AJ0 1406 aa21.58■■□□□ 1.05
PFDN6-202ENST00000374607 XIRP1Q702N8 1843 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms