RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 ITSN2Q9NZM3 1697 aa17.39■□□□□ 0.37
CLIC4-201ENST00000374379 PAK3O75914 559 aaPredicted RBP17.38■□□□□ 0.37
CLIC4-201ENST00000374379 HDGFP51858 240 aaKnown RBP17.38■□□□□ 0.37
CLIC4-201ENST00000374379 STAC3Q96MF2 364 aa17.38■□□□□ 0.37
CLIC4-201ENST00000374379 E9PSI1 815 aa17.38■□□□□ 0.37
CLIC4-201ENST00000374379 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
CLIC4-201ENST00000374379 FANCAO15360 1455 aa17.38■□□□□ 0.37
CLIC4-201ENST00000374379 APBB1O00213 710 aa17.38■□□□□ 0.37
CLIC4-201ENST00000374379 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
CLIC4-201ENST00000374379 TEX14Q8IWB6 1497 aa17.37■□□□□ 0.37
CLIC4-201ENST00000374379 PANK1Q8TE04 598 aa17.36■□□□□ 0.37
CLIC4-201ENST00000374379 PLCH2O75038 1416 aa17.36■□□□□ 0.37
CLIC4-201ENST00000374379 BCAR3O75815 825 aa17.36■□□□□ 0.37
CLIC4-201ENST00000374379 TCP11L2Q8N4U5 519 aa17.36■□□□□ 0.37
CLIC4-201ENST00000374379 FAM135AQ9P2D6 1515 aa17.36■□□□□ 0.37
CLIC4-201ENST00000374379 IPO9Q96P70 1041 aaKnown RBP17.36■□□□□ 0.37
CLIC4-201ENST00000374379 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
CLIC4-201ENST00000374379 HMOX1P09601 288 aa17.35■□□□□ 0.37
CLIC4-201ENST00000374379 FBXO31Q5XUX0 539 aaPredicted RBP17.34■□□□□ 0.37
CLIC4-201ENST00000374379 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
CLIC4-201ENST00000374379 TESK2Q96S53 571 aa17.33■□□□□ 0.37
CLIC4-201ENST00000374379 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
CLIC4-201ENST00000374379 LTV1Q96GA3 475 aaPredicted RBP17.32■□□□□ 0.36
CLIC4-201ENST00000374379 PRAG1Q86YV5 1406 aa17.31■□□□□ 0.36
CLIC4-201ENST00000374379 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
CLIC4-201ENST00000374379 IDI1Q13907 227 aa17.31■□□□□ 0.36
CLIC4-201ENST00000374379 RALGAPBQ86X10 1494 aa17.31■□□□□ 0.36
CLIC4-201ENST00000374379 BECN1Q14457 450 aa17.31■□□□□ 0.36
CLIC4-201ENST00000374379 RIPK4P57078 832 aa17.3■□□□□ 0.36
CLIC4-201ENST00000374379 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
CLIC4-201ENST00000374379 DHX29Q7Z478 1369 aaKnown RBP17.3■□□□□ 0.36
CLIC4-201ENST00000374379 TXNDC2Q86VQ3 553 aa17.29■□□□□ 0.36
CLIC4-201ENST00000374379 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
CLIC4-201ENST00000374379 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
CLIC4-201ENST00000374379 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
CLIC4-201ENST00000374379 DEKP35659 375 aaKnown RBP17.28■□□□□ 0.36
CLIC4-201ENST00000374379 CENPQQ7L2Z9 268 aaPredicted RBP17.28■□□□□ 0.36
CLIC4-201ENST00000374379 FANCIQ9NVI1 1328 aa17.28■□□□□ 0.36
CLIC4-201ENST00000374379 MS4A1P11836 297 aa17.28■□□□□ 0.36
CLIC4-201ENST00000374379 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
CLIC4-201ENST00000374379 ASXL2Q76L83 1435 aa17.27■□□□□ 0.36
CLIC4-201ENST00000374379 RWDD1Q9H446 243 aaPredicted RBP17.27■□□□□ 0.35
CLIC4-201ENST00000374379 NOS1P29475 1434 aa17.26■□□□□ 0.35
CLIC4-201ENST00000374379 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
CLIC4-201ENST00000374379 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
CLIC4-201ENST00000374379 EID1Q9Y6B2 187 aa17.25■□□□□ 0.35
CLIC4-201ENST00000374379 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
CLIC4-201ENST00000374379 COG3Q96JB2 828 aa17.25■□□□□ 0.35
CLIC4-201ENST00000374379 IPO8O15397 1037 aaKnown RBP17.25■□□□□ 0.35
CLIC4-201ENST00000374379 NSD3Q9BZ95 1437 aa17.25■□□□□ 0.35
CLIC4-201ENST00000374379 PER1O15534 1290 aaPredicted RBP17.24■□□□□ 0.35
CLIC4-201ENST00000374379 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
CLIC4-201ENST00000374379 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
CLIC4-201ENST00000374379 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
CLIC4-201ENST00000374379 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
CLIC4-201ENST00000374379 A0A0G2JS52 829 aa17.23■□□□□ 0.35
CLIC4-201ENST00000374379 RTN4Q9NQC3 1192 aaKnown RBP17.23■□□□□ 0.35
CLIC4-201ENST00000374379 MBD5Q9P267 1494 aa17.23■□□□□ 0.35
CLIC4-201ENST00000374379 KDM5BQ9UGL1 1544 aa17.23■□□□□ 0.35
CLIC4-201ENST00000374379 FBLN1P23142 703 aa17.23■□□□□ 0.35
CLIC4-201ENST00000374379 SLC52A1Q9NWF4 448 aa17.23■□□□□ 0.35
CLIC4-201ENST00000374379 SHANK2Q9UPX8 1470 aa17.22■□□□□ 0.35
CLIC4-201ENST00000374379 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
CLIC4-201ENST00000374379 NUTM2GQ5VZR2 741 aa17.22■□□□□ 0.35
CLIC4-201ENST00000374379 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
CLIC4-201ENST00000374379 AMER1Q5JTC6 1135 aaPredicted RBP17.22■□□□□ 0.35
CLIC4-201ENST00000374379 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
CLIC4-201ENST00000374379 DUOX2Q9NRD8 1548 aa17.22■□□□□ 0.35
CLIC4-201ENST00000374379 MSH5O43196 834 aa17.21■□□□□ 0.35
CLIC4-201ENST00000374379 AMPHP49418 695 aa17.21■□□□□ 0.35
CLIC4-201ENST00000374379 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
CLIC4-201ENST00000374379 A2MP01023 1474 aa17.21■□□□□ 0.35
CLIC4-201ENST00000374379 ABCC2Q92887 1545 aa17.21■□□□□ 0.35
CLIC4-201ENST00000374379 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
CLIC4-201ENST00000374379 SLC4A10Q6U841 1118 aa17.2■□□□□ 0.34
CLIC4-201ENST00000374379 SLC26A8Q96RN1 970 aa17.2■□□□□ 0.34
CLIC4-201ENST00000374379 SCAF11Q99590 1463 aaKnown RBP17.19■□□□□ 0.34
CLIC4-201ENST00000374379 EXOSC9Q06265 439 aaKnown RBP17.19■□□□□ 0.34
CLIC4-201ENST00000374379 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
CLIC4-201ENST00000374379 WDR7Q9Y4E6 1490 aa17.19■□□□□ 0.34
CLIC4-201ENST00000374379 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
CLIC4-201ENST00000374379 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
CLIC4-201ENST00000374379 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
CLIC4-201ENST00000374379 ABCA8O94911 1581 aa17.18■□□□□ 0.34
CLIC4-201ENST00000374379 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
CLIC4-201ENST00000374379 ERCC6L2Q5T890 1561 aa17.17■□□□□ 0.34
CLIC4-201ENST00000374379 DZIP1LQ8IYY4 767 aaKnown RBP17.17■□□□□ 0.34
CLIC4-201ENST00000374379 TPRNQ4KMQ1 711 aa17.17■□□□□ 0.34
CLIC4-201ENST00000374379 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
CLIC4-201ENST00000374379 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
CLIC4-201ENST00000374379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.346e-6■■■■■ 38.2
CLIC4-201ENST00000374379 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
CLIC4-201ENST00000374379 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
CLIC4-201ENST00000374379 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
CLIC4-201ENST00000374379 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
CLIC4-201ENST00000374379 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
CLIC4-201ENST00000374379 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
CLIC4-201ENST00000374379 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
CLIC4-201ENST00000374379 UHRF1BP1Q6BDS2 1440 aa17.14■□□□□ 0.33
CLIC4-201ENST00000374379 RPGRIP1LQ68CZ1 1315 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms