RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 GNAI1P63096 354 aa13.62□□□□□ -0.23
PHACTR4-202ENST00000373839 TRIM29Q14134 588 aa13.62□□□□□ -0.23
PHACTR4-202ENST00000373839 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
PHACTR4-202ENST00000373839 VPS37DQ86XT2 251 aa13.62□□□□□ -0.23
PHACTR4-202ENST00000373839 RBM19Q9Y4C8 960 aaKnown RBP13.62□□□□□ -0.23
PHACTR4-202ENST00000373839 TPM1P09493 284 aa13.61□□□□□ -0.23
PHACTR4-202ENST00000373839 RILPL2Q969X0 211 aa13.61□□□□□ -0.23
PHACTR4-202ENST00000373839 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
PHACTR4-202ENST00000373839 GOLGA6L1Q8N7Z2 621 aa13.61□□□□□ -0.23
PHACTR4-202ENST00000373839 RRP7AQ9Y3A4 280 aaKnown RBP13.61□□□□□ -0.23
PHACTR4-202ENST00000373839 TRDNQ13061 729 aa13.6□□□□□ -0.23
PHACTR4-202ENST00000373839 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.23
PHACTR4-202ENST00000373839 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
PHACTR4-202ENST00000373839 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
PHACTR4-202ENST00000373839 ANKRD45Q5TZF3 282 aa13.6□□□□□ -0.23
PHACTR4-202ENST00000373839 PRM3Q9NNZ6 103 aa13.59□□□□□ -0.23
PHACTR4-202ENST00000373839 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
PHACTR4-202ENST00000373839 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
PHACTR4-202ENST00000373839 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
PHACTR4-202ENST00000373839 ELL2O00472 640 aaPredicted RBP13.59□□□□□ -0.23
PHACTR4-202ENST00000373839 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
PHACTR4-202ENST00000373839 SKOR2Q2VWA4 1001 aaPredicted RBP13.58□□□□□ -0.24
PHACTR4-202ENST00000373839 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
PHACTR4-202ENST00000373839 IPO9Q96P70 1041 aaKnown RBP13.58□□□□□ -0.24
PHACTR4-202ENST00000373839 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 SYTL4Q96C24 671 aaPredicted RBP13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 IGF1RP08069 1367 aa13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 RIPK4P57078 832 aa13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 CPLX1O14810 134 aa13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 ERC2O15083 957 aa13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 ZBED9Q6R2W3 1325 aa13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 FAM161AQ3B820 660 aa13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 FKBP5Q13451 457 aaPredicted RBP13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 HOOK1Q9UJC3 728 aaKnown RBP13.57□□□□□ -0.24
PHACTR4-202ENST00000373839 ERICH2A1L162 156 aa13.56□□□□□ -0.24
PHACTR4-202ENST00000373839 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
PHACTR4-202ENST00000373839 CREBRFQ8IUR6 639 aa13.56□□□□□ -0.24
PHACTR4-202ENST00000373839 DZIP1LQ8IYY4 767 aaKnown RBP13.56□□□□□ -0.24
PHACTR4-202ENST00000373839 FYCO1Q9BQS8 1478 aa13.55□□□□□ -0.24
PHACTR4-202ENST00000373839 GOLGA6L19H0YKK7 550 aa13.55□□□□□ -0.24
PHACTR4-202ENST00000373839 GZF1Q9H116 711 aaPredicted RBP13.55□□□□□ -0.24
PHACTR4-202ENST00000373839 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
PHACTR4-202ENST00000373839 BECN2A8MW95 431 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 FGD6Q6ZV73 1430 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 ANKRD50Q9ULJ7 1429 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 APAF1O14727 1248 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 NCAPD3P42695 1498 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 APPP05067 770 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 SYNJ2O15056 1496 aa13.54□□□□□ -0.24
PHACTR4-202ENST00000373839 PLEKHH2Q8IVE3 1493 aa13.53□□□□□ -0.24
PHACTR4-202ENST00000373839 RRP1P56182 461 aaKnown RBP13.53□□□□□ -0.24
PHACTR4-202ENST00000373839 IPO7O95373 1038 aaKnown RBP13.53□□□□□ -0.24
PHACTR4-202ENST00000373839 PES1O00541 588 aaKnown RBP13.53□□□□□ -0.24
PHACTR4-202ENST00000373839 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
PHACTR4-202ENST00000373839 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.24
PHACTR4-202ENST00000373839 DEKP35659 375 aaKnown RBP13.52□□□□□ -0.24
PHACTR4-202ENST00000373839 CCDC70Q6NSX1 233 aa13.52□□□□□ -0.24
PHACTR4-202ENST00000373839 CWC22Q9HCG8 908 aaKnown RBP13.52□□□□□ -0.24
PHACTR4-202ENST00000373839 THEMISQ8N1K5 641 aaPredicted RBP13.51□□□□□ -0.25
PHACTR4-202ENST00000373839 CCDC43Q96MW1 224 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-202ENST00000373839 BCL2L13Q9BXK5 485 aa13.51□□□□□ -0.25
PHACTR4-202ENST00000373839 SAFBQ15424 915 aaKnown RBP eCLIP13.51□□□□□ -0.25
PHACTR4-202ENST00000373839 NLRP6P59044 892 aa13.51□□□□□ -0.25
PHACTR4-202ENST00000373839 RIC3Q7Z5B4 369 aa13.51□□□□□ -0.25
PHACTR4-202ENST00000373839 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
PHACTR4-202ENST00000373839 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
PHACTR4-202ENST00000373839 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
PHACTR4-202ENST00000373839 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
PHACTR4-202ENST00000373839 COG6Q9Y2V7 657 aa13.5□□□□□ -0.25
PHACTR4-202ENST00000373839 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
PHACTR4-202ENST00000373839 PLEKHO1Q53GL0 409 aaPredicted RBP13.5□□□□□ -0.25
PHACTR4-202ENST00000373839 RAD21O60216 631 aa13.49□□□□□ -0.25
PHACTR4-202ENST00000373839 INTS3Q68E01 1043 aaKnown RBP13.49□□□□□ -0.25
PHACTR4-202ENST00000373839 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
PHACTR4-202ENST00000373839 RALYLQ86SE5 291 aaKnown RBP13.49□□□□□ -0.25
PHACTR4-202ENST00000373839 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
PHACTR4-202ENST00000373839 CASKIN1Q8WXD9 1431 aa13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 DDX49Q9Y6V7 483 aaKnown RBP13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 ARHGAP5Q13017 1502 aa13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 POGZQ7Z3K3 1410 aa13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 GNAI3P08754 354 aa13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 PROSER2Q86WR7 435 aaPredicted RBP13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
PHACTR4-202ENST00000373839 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
PHACTR4-202ENST00000373839 XBP1P17861 261 aa13.47□□□□□ -0.25
PHACTR4-202ENST00000373839 BRMS1Q9HCU9 246 aa13.47□□□□□ -0.25
PHACTR4-202ENST00000373839 UBTFL1P0CB47 393 aaPredicted RBP13.46□□□□□ -0.25
PHACTR4-202ENST00000373839 NINLQ9Y2I6 1382 aa13.46□□□□□ -0.25
PHACTR4-202ENST00000373839 SLC52A1Q9NWF4 448 aa13.46□□□□□ -0.25
PHACTR4-202ENST00000373839 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.26
PHACTR4-202ENST00000373839 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.26
PHACTR4-202ENST00000373839 TBC1D2BQ9UPU7 963 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms