RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
PGK1-201ENST00000373316 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
PGK1-201ENST00000373316 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
PGK1-201ENST00000373316 ERBINQ96RT1 1412 aa13.55□□□□□ -0.24
PGK1-201ENST00000373316 POGKQ9P215 609 aa13.55□□□□□ -0.24
PGK1-201ENST00000373316 NBR1Q14596 966 aa13.55□□□□□ -0.24
PGK1-201ENST00000373316 PMFBP1Q8TBY8 1022 aa13.55□□□□□ -0.24
PGK1-201ENST00000373316 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
PGK1-201ENST00000373316 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
PGK1-201ENST00000373316 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
PGK1-201ENST00000373316 MAST1Q9Y2H9 1570 aa13.54□□□□□ -0.24
PGK1-201ENST00000373316 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
PGK1-201ENST00000373316 RCAN3Q9UKA8 241 aa13.53□□□□□ -0.24
PGK1-201ENST00000373316 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.24
PGK1-201ENST00000373316 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.25
PGK1-201ENST00000373316 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.25
PGK1-201ENST00000373316 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
PGK1-201ENST00000373316 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.25
PGK1-201ENST00000373316 INO80Q9ULG1 1556 aaPredicted RBP13.52□□□□□ -0.25
PGK1-201ENST00000373316 USP35Q9P2H5 1018 aa13.51□□□□□ -0.25
PGK1-201ENST00000373316 ADGRF5Q8IZF2 1346 aa13.51□□□□□ -0.25
PGK1-201ENST00000373316 RWDD1Q9H446 243 aaPredicted RBP13.51□□□□□ -0.25
PGK1-201ENST00000373316 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
PGK1-201ENST00000373316 ATP10AO60312 1499 aa13.5□□□□□ -0.25
PGK1-201ENST00000373316 RTEL1-TNFRSF6BF6WH68 1400 aa13.5□□□□□ -0.25
PGK1-201ENST00000373316 E9PCH4 1651 aa13.5□□□□□ -0.25
PGK1-201ENST00000373316 ABCA6Q8N139 1617 aa13.5□□□□□ -0.25
PGK1-201ENST00000373316 UNC13BO14795 1591 aa13.5□□□□□ -0.25
PGK1-201ENST00000373316 RBM19Q9Y4C8 960 aaKnown RBP13.5□□□□□ -0.25
PGK1-201ENST00000373316 MCCP23508 829 aa13.49□□□□□ -0.25
PGK1-201ENST00000373316 FRMPD1Q5SYB0 1578 aa13.49□□□□□ -0.25
PGK1-201ENST00000373316 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
PGK1-201ENST00000373316 KDM5DQ9BY66 1539 aa13.49□□□□□ -0.25
PGK1-201ENST00000373316 CNTLNQ9NXG0 1405 aa13.49□□□□□ -0.25
PGK1-201ENST00000373316 DIP2BQ9P265 1576 aa13.48□□□□□ -0.25
PGK1-201ENST00000373316 CCDC7Q96M83 1385 aa13.48□□□□□ -0.25
PGK1-201ENST00000373316 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
PGK1-201ENST00000373316 IQGAP3Q86VI3 1631 aa13.48□□□□□ -0.25
PGK1-201ENST00000373316 CEBPAP49715 358 aaPredicted RBP13.47□□□□□ -0.25
PGK1-201ENST00000373316 CEP152O94986 1710 aa13.47□□□□□ -0.25
PGK1-201ENST00000373316 ARAP3Q8WWN8 1544 aa13.47□□□□□ -0.25
PGK1-201ENST00000373316 PRDM15P57071 1507 aaPredicted RBP13.47□□□□□ -0.25
PGK1-201ENST00000373316 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
PGK1-201ENST00000373316 NPATQ14207 1427 aa13.46□□□□□ -0.26
PGK1-201ENST00000373316 STK26Q9P289 416 aa13.45□□□□□ -0.26
PGK1-201ENST00000373316 MROH1Q8NDA8 1641 aa13.45□□□□□ -0.26
PGK1-201ENST00000373316 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
PGK1-201ENST00000373316 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
PGK1-201ENST00000373316 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
PGK1-201ENST00000373316 IDI1Q13907 227 aa13.45□□□□□ -0.26
PGK1-201ENST00000373316 BCORL1Q5H9F3 1711 aa13.45□□□□□ -0.26
PGK1-201ENST00000373316 TRAK1Q9UPV9 953 aa13.45□□□□□ -0.26
PGK1-201ENST00000373316 SPATA31E1Q6ZUB1 1445 aa13.44□□□□□ -0.26
PGK1-201ENST00000373316 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
PGK1-201ENST00000373316 GOLGA6L6A8MZA4 724 aa13.44□□□□□ -0.26
PGK1-201ENST00000373316 MAP3K4Q9Y6R4 1608 aa13.44□□□□□ -0.26
PGK1-201ENST00000373316 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
PGK1-201ENST00000373316 FANCIQ9NVI1 1328 aa13.44□□□□□ -0.26
PGK1-201ENST00000373316 MAGI2Q86UL8 1455 aa13.43□□□□□ -0.26
PGK1-201ENST00000373316 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
PGK1-201ENST00000373316 PRKRIP1Q9H875 184 aaPredicted RBP13.42□□□□□ -0.26
PGK1-201ENST00000373316 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
PGK1-201ENST00000373316 GBP4Q96PP9 640 aa13.42□□□□□ -0.26
PGK1-201ENST00000373316 NEO1Q92859 1461 aa13.42□□□□□ -0.26
PGK1-201ENST00000373316 KDM5CP41229 1560 aa13.41□□□□□ -0.26
PGK1-201ENST00000373316 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
PGK1-201ENST00000373316 IPO9Q96P70 1041 aaKnown RBP13.41□□□□□ -0.26
PGK1-201ENST00000373316 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
PGK1-201ENST00000373316 MLH3Q9UHC1 1453 aa13.41□□□□□ -0.26
PGK1-201ENST00000373316 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
PGK1-201ENST00000373316 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
PGK1-201ENST00000373316 NRDCO43847 1150 aa13.4□□□□□ -0.26
PGK1-201ENST00000373316 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
PGK1-201ENST00000373316 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
PGK1-201ENST00000373316 NOS1P29475 1434 aa13.4□□□□□ -0.26
PGK1-201ENST00000373316 RICTORQ6R327 1708 aa13.39□□□□□ -0.27
PGK1-201ENST00000373316 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
PGK1-201ENST00000373316 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
PGK1-201ENST00000373316 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
PGK1-201ENST00000373316 CGNL1Q0VF96 1302 aa13.38□□□□□ -0.27
PGK1-201ENST00000373316 E9PSI1 815 aa13.38□□□□□ -0.27
PGK1-201ENST00000373316 FRAT1Q92837 279 aaPredicted RBP13.38□□□□□ -0.27
PGK1-201ENST00000373316 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
PGK1-201ENST00000373316 KIF13AQ9H1H9 1805 aa13.37□□□□□ -0.27
PGK1-201ENST00000373316 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
PGK1-201ENST00000373316 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
PGK1-201ENST00000373316 TESK2Q96S53 571 aa13.36□□□□□ -0.27
PGK1-201ENST00000373316 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
PGK1-201ENST00000373316 DEPDC5O75140 1603 aa13.36□□□□□ -0.27
PGK1-201ENST00000373316 UHRF1BP1Q6BDS2 1440 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
PGK1-201ENST00000373316 ABCC3O15438 1527 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 HMMRO75330 724 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 RGS3P49796 1198 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 EFCAB6Q5THR3 1501 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 PTPRTO14522 1441 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 TET3O43151 1660 aa13.35□□□□□ -0.27
PGK1-201ENST00000373316 HTATSF1O43719 755 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms