RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 IDI1Q13907 227 aa17.21■□□□□ 0.35
NCDN-203ENST00000373253 C20orf194Q5TEA3 1177 aa17.21■□□□□ 0.35
NCDN-203ENST00000373253 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
NCDN-203ENST00000373253 ADGRL2O95490 1459 aa17.21■□□□□ 0.34
NCDN-203ENST00000373253 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
NCDN-203ENST00000373253 MTHFSP49914 203 aa17.2■□□□□ 0.34
NCDN-203ENST00000373253 SAMD9LQ8IVG5 1584 aa17.2■□□□□ 0.34
NCDN-203ENST00000373253 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
NCDN-203ENST00000373253 ABCC2Q92887 1545 aa17.2■□□□□ 0.34
NCDN-203ENST00000373253 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
NCDN-203ENST00000373253 TCERG1O14776 1098 aaKnown RBP17.19■□□□□ 0.34
NCDN-203ENST00000373253 A2MP01023 1474 aa17.18■□□□□ 0.34
NCDN-203ENST00000373253 ELL2O00472 640 aaPredicted RBP17.18■□□□□ 0.34
NCDN-203ENST00000373253 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
NCDN-203ENST00000373253 PRAM1Q96QH2 718 aa17.17■□□□□ 0.34
NCDN-203ENST00000373253 RALGAPBQ86X10 1494 aa17.17■□□□□ 0.34
NCDN-203ENST00000373253 BCAR3O75815 825 aa17.17■□□□□ 0.34
NCDN-203ENST00000373253 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
NCDN-203ENST00000373253 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
NCDN-203ENST00000373253 WAPLQ7Z5K2 1190 aa17.15■□□□□ 0.34
NCDN-203ENST00000373253 NOS1P29475 1434 aa17.14■□□□□ 0.34
NCDN-203ENST00000373253 PLA2R1Q13018 1463 aa17.14■□□□□ 0.33
NCDN-203ENST00000373253 SLC4A3P48751 1232 aa17.14■□□□□ 0.33
NCDN-203ENST00000373253 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
NCDN-203ENST00000373253 FTSJ3Q8IY81 847 aaKnown RBP17.12■□□□□ 0.33
NCDN-203ENST00000373253 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
NCDN-203ENST00000373253 EVC2Q86UK5 1308 aa17.12■□□□□ 0.33
NCDN-203ENST00000373253 PANK1Q8TE04 598 aa17.11■□□□□ 0.33
NCDN-203ENST00000373253 HMOX1P09601 288 aa17.11■□□□□ 0.33
NCDN-203ENST00000373253 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
NCDN-203ENST00000373253 CARD14Q9BXL6 1004 aa17.11■□□□□ 0.33
NCDN-203ENST00000373253 PDE3BQ13370 1112 aa17.11■□□□□ 0.33
NCDN-203ENST00000373253 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
NCDN-203ENST00000373253 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
NCDN-203ENST00000373253 UGGT1Q9NYU2 1555 aa17.1■□□□□ 0.33
NCDN-203ENST00000373253 MSH5O43196 834 aa17.1■□□□□ 0.33
NCDN-203ENST00000373253 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
NCDN-203ENST00000373253 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
NCDN-203ENST00000373253 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
NCDN-203ENST00000373253 CABP1Q9NZU7 370 aa17.09■□□□□ 0.33
NCDN-203ENST00000373253 CGNL1Q0VF96 1302 aa17.09■□□□□ 0.33
NCDN-203ENST00000373253 DUOX2Q9NRD8 1548 aa17.09■□□□□ 0.33
NCDN-203ENST00000373253 NOP58Q9Y2X3 529 aaKnown RBP17.08■□□□□ 0.33
NCDN-203ENST00000373253 CEBPAP49715 358 aaPredicted RBP17.08■□□□□ 0.32
NCDN-203ENST00000373253 ARXQ96QS3 562 aa17.08■□□□□ 0.32
NCDN-203ENST00000373253 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.32
NCDN-203ENST00000373253 BCORL1Q5H9F3 1711 aa17.08■□□□□ 0.32
NCDN-203ENST00000373253 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
NCDN-203ENST00000373253 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
NCDN-203ENST00000373253 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
NCDN-203ENST00000373253 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
NCDN-203ENST00000373253 SLC26A8Q96RN1 970 aa17.05■□□□□ 0.32
NCDN-203ENST00000373253 RBM33Q96EV2 1170 aaKnown RBP17.05■□□□□ 0.32
NCDN-203ENST00000373253 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
NCDN-203ENST00000373253 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
NCDN-203ENST00000373253 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
NCDN-203ENST00000373253 PDE4AP27815 886 aa17.04■□□□□ 0.32
NCDN-203ENST00000373253 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
NCDN-203ENST00000373253 CDC42BPBQ9Y5S2 1711 aa17.03■□□□□ 0.32
NCDN-203ENST00000373253 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
NCDN-203ENST00000373253 SPRYD3Q8NCJ5 442 aa17.02■□□□□ 0.32
NCDN-203ENST00000373253 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
NCDN-203ENST00000373253 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.32
NCDN-203ENST00000373253 LTV1Q96GA3 475 aaPredicted RBP17.01■□□□□ 0.31
NCDN-203ENST00000373253 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
NCDN-203ENST00000373253 APBB1O00213 710 aa17.01■□□□□ 0.31
NCDN-203ENST00000373253 PARD3Q8TEW0 1356 aa17.01■□□□□ 0.31
NCDN-203ENST00000373253 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
NCDN-203ENST00000373253 DEKP35659 375 aaKnown RBP17■□□□□ 0.31
NCDN-203ENST00000373253 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
NCDN-203ENST00000373253 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
NCDN-203ENST00000373253 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
NCDN-203ENST00000373253 C14orf93Q9H972 538 aaKnown RBP16.99■□□□□ 0.31
NCDN-203ENST00000373253 ZCCHC11Q5TAX3 1644 aaKnown RBP16.99■□□□□ 0.31
NCDN-203ENST00000373253 PREX2Q70Z35 1606 aa16.98■□□□□ 0.31
NCDN-203ENST00000373253 KDM5CP41229 1560 aa16.98■□□□□ 0.31
NCDN-203ENST00000373253 E9PSI1 815 aa16.98■□□□□ 0.31
NCDN-203ENST00000373253 RIPK4P57078 832 aa16.98■□□□□ 0.31
NCDN-203ENST00000373253 MYO5CQ9NQX4 1742 aa16.98■□□□□ 0.31
NCDN-203ENST00000373253 PMFBP1Q8TBY8 1022 aa16.98■□□□□ 0.31
NCDN-203ENST00000373253 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
NCDN-203ENST00000373253 RRS1Q15050 365 aaKnown RBP16.97■□□□□ 0.31
NCDN-203ENST00000373253 DUSP27Q5VZP5 1158 aa16.97■□□□□ 0.31
NCDN-203ENST00000373253 ARHGEF5Q12774 1597 aa16.97■□□□□ 0.31
NCDN-203ENST00000373253 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
NCDN-203ENST00000373253 TNNQ9UQP3 1299 aa16.97■□□□□ 0.31
NCDN-203ENST00000373253 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
NCDN-203ENST00000373253 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
NCDN-203ENST00000373253 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
NCDN-203ENST00000373253 ATP10AO60312 1499 aa16.95■□□□□ 0.3
NCDN-203ENST00000373253 ANO8Q9HCE9 1232 aaPredicted RBP16.95■□□□□ 0.3
NCDN-203ENST00000373253 ZRANB1Q9UGI0 708 aa16.95■□□□□ 0.3
NCDN-203ENST00000373253 SLC52A1Q9NWF4 448 aa16.94■□□□□ 0.3
NCDN-203ENST00000373253 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
NCDN-203ENST00000373253 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
NCDN-203ENST00000373253 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
NCDN-203ENST00000373253 ADCY10Q96PN6 1610 aa16.93■□□□□ 0.3
NCDN-203ENST00000373253 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
NCDN-203ENST00000373253 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
NCDN-203ENST00000373253 IPO9Q96P70 1041 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms