RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.64
PTPRT-206ENST00000373198 TRDNQ13061 729 aa11.02□□□□□ -0.64
PTPRT-206ENST00000373198 LRRFIP1Q32MZ4 808 aaKnown RBP11.02□□□□□ -0.65
PTPRT-206ENST00000373198 BICD2Q8TD16 824 aa11.02□□□□□ -0.65
PTPRT-206ENST00000373198 IPO9Q96P70 1041 aaKnown RBP11.02□□□□□ -0.65
PTPRT-206ENST00000373198 NEFHP12036 1026 aa11.02□□□□□ -0.65
PTPRT-206ENST00000373198 ANKRD62A6NC57 917 aa11.01□□□□□ -0.65
PTPRT-206ENST00000373198 ANKRD45Q5TZF3 282 aa11.01□□□□□ -0.65
PTPRT-206ENST00000373198 LMOD3Q0VAK6 560 aa11.01□□□□□ -0.65
PTPRT-206ENST00000373198 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
PTPRT-206ENST00000373198 NOM1Q5C9Z4 860 aaKnown RBP11□□□□□ -0.65
PTPRT-206ENST00000373198 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
PTPRT-206ENST00000373198 PDILTQ8N807 584 aa11□□□□□ -0.65
PTPRT-206ENST00000373198 ELL2O00472 640 aaPredicted RBP10.99□□□□□ -0.65
PTPRT-206ENST00000373198 EIF3AQ14152 1382 aaKnown RBP10.99□□□□□ -0.65
PTPRT-206ENST00000373198 NEXNQ0ZGT2 675 aa10.99□□□□□ -0.65
PTPRT-206ENST00000373198 DDX49Q9Y6V7 483 aaKnown RBP10.99□□□□□ -0.65
PTPRT-206ENST00000373198 CCDC173Q0VFZ6 552 aa10.99□□□□□ -0.65
PTPRT-206ENST00000373198 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
PTPRT-206ENST00000373198 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
PTPRT-206ENST00000373198 CENPJQ9HC77 1338 aaPredicted RBP10.99□□□□□ -0.65
PTPRT-206ENST00000373198 ATP6V1DQ9Y5K8 247 aa10.99□□□□□ -0.65
PTPRT-206ENST00000373198 MAPK8IP2Q13387 824 aaPredicted RBP10.99□□□□□ -0.65
PTPRT-206ENST00000373198 ZRSR2Q15696 482 aaKnown RBP10.98□□□□□ -0.65
PTPRT-206ENST00000373198 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
PTPRT-206ENST00000373198 PLIN1O60240 522 aa10.98□□□□□ -0.65
PTPRT-206ENST00000373198 H0YHG0 523 aa10.98□□□□□ -0.65
PTPRT-206ENST00000373198 IFIT2P09913 472 aaKnown RBP10.97□□□□□ -0.65
PTPRT-206ENST00000373198 SAFBQ15424 915 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTPRT-206ENST00000373198 BCL2L13Q9BXK5 485 aa10.97□□□□□ -0.65
PTPRT-206ENST00000373198 SEPT7Q16181 437 aaKnown RBP10.97□□□□□ -0.65
PTPRT-206ENST00000373198 CHMP4CQ96CF2 233 aa10.97□□□□□ -0.65
PTPRT-206ENST00000373198 ATP2B2Q01814 1243 aa10.97□□□□□ -0.65
PTPRT-206ENST00000373198 TEFQ10587 303 aa10.97□□□□□ -0.65
PTPRT-206ENST00000373198 MNS1Q8NEH6 495 aa10.97□□□□□ -0.65
PTPRT-206ENST00000373198 GOLGA3Q08378 1498 aa10.96□□□□□ -0.65
PTPRT-206ENST00000373198 VPS37CA5D8V6 355 aaPredicted RBP10.96□□□□□ -0.65
PTPRT-206ENST00000373198 MYO6Q9UM54 1294 aa10.96□□□□□ -0.66
PTPRT-206ENST00000373198 ENOX2Q16206 610 aaKnown RBP10.96□□□□□ -0.66
PTPRT-206ENST00000373198 RUFY2Q8WXA3 655 aa10.95□□□□□ -0.66
PTPRT-206ENST00000373198 ACBD3Q9H3P7 528 aa10.95□□□□□ -0.66
PTPRT-206ENST00000373198 IFT57Q9NWB7 429 aa10.95□□□□□ -0.66
PTPRT-206ENST00000373198 ZKSCAN1P17029 563 aaPredicted RBP10.95□□□□□ -0.66
PTPRT-206ENST00000373198 HSPA5P11021 654 aaKnown RBP10.95□□□□□ -0.66
PTPRT-206ENST00000373198 SYCP1Q15431 976 aa10.95□□□□□ -0.66
PTPRT-206ENST00000373198 PKD2Q13563 968 aa10.94□□□□□ -0.66
PTPRT-206ENST00000373198 TSHZ2Q9NRE2 1034 aa10.94□□□□□ -0.66
PTPRT-206ENST00000373198 HSP90B2PQ58FF3 399 aa10.94□□□□□ -0.66
PTPRT-206ENST00000373198 CEP162Q5TB80 1403 aa10.94□□□□□ -0.66
PTPRT-206ENST00000373198 SASS6Q6UVJ0 657 aa10.94□□□□□ -0.66
PTPRT-206ENST00000373198 BRMS1Q9HCU9 246 aa10.94□□□□□ -0.66
PTPRT-206ENST00000373198 TSPYL1Q9H0U9 437 aa10.94□□□□□ -0.66
PTPRT-206ENST00000373198 OLFM4Q6UX06 510 aa10.93□□□□□ -0.66
PTPRT-206ENST00000373198 CDK5RAP3Q96JB5 506 aa10.93□□□□□ -0.66
PTPRT-206ENST00000373198 FAM177BA6PVY3 158 aa10.93□□□□□ -0.66
PTPRT-206ENST00000373198 MATR3P43243 847 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTPRT-206ENST00000373198 WASHC4Q2M389 1173 aa10.93□□□□□ -0.66
PTPRT-206ENST00000373198 G3BP1Q13283 466 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTPRT-206ENST00000373198 BRPF1P55201 1214 aaPredicted RBP10.92□□□□□ -0.66
PTPRT-206ENST00000373198 RALYLQ86SE5 291 aaKnown RBP10.92□□□□□ -0.66
PTPRT-206ENST00000373198 CGNL1Q0VF96 1302 aa10.92□□□□□ -0.66
PTPRT-206ENST00000373198 KRT18P05783 430 aaKnown RBP10.92□□□□□ -0.66
PTPRT-206ENST00000373198 PKNOX2Q96KN3 472 aa10.92□□□□□ -0.66
PTPRT-206ENST00000373198 PSME1Q06323 249 aa10.92□□□□□ -0.66
PTPRT-206ENST00000373198 GSE1Q14687 1217 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 ZHX3Q9H4I2 956 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 ARGLU1Q9NWB6 273 aaPredicted RBP10.91□□□□□ -0.66
PTPRT-206ENST00000373198 CCDC73Q6ZRK6 1079 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 COG3Q96JB2 828 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 NEBLO76041 1014 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 ATP2B1P20020 1258 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 NEUROD6Q96NK8 337 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 CENPHQ9H3R5 247 aa10.91□□□□□ -0.66
PTPRT-206ENST00000373198 CHMP4BP1P59074 171 aa10.9□□□□□ -0.66
PTPRT-206ENST00000373198 RNF20Q5VTR2 975 aa10.9□□□□□ -0.66
PTPRT-206ENST00000373198 TRAK1Q9UPV9 953 aa10.9□□□□□ -0.66
PTPRT-206ENST00000373198 HMGN5P82970 282 aaKnown RBP10.9□□□□□ -0.66
PTPRT-206ENST00000373198 RALBP1Q15311 655 aa10.9□□□□□ -0.66
PTPRT-206ENST00000373198 HSP90AB4PQ58FF6 505 aa10.9□□□□□ -0.66
PTPRT-206ENST00000373198 PDCL3Q9H2J4 239 aa10.9□□□□□ -0.66
PTPRT-206ENST00000373198 AIMP1Q12904 312 aaKnown RBP10.9□□□□□ -0.66
PTPRT-206ENST00000373198 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.9□□□□□ -0.66
PTPRT-206ENST00000373198 MAGEC2Q9UBF1 373 aaPredicted RBP10.9□□□□□ -0.67
PTPRT-206ENST00000373198 WASHC2CQ9Y4E1 1318 aa10.89□□□□□ -0.67
PTPRT-206ENST00000373198 STK11IPQ8N1F8 1099 aa10.89□□□□□ -0.67
PTPRT-206ENST00000373198 PODXL2Q9NZ53 605 aa10.89□□□□□ -0.67
PTPRT-206ENST00000373198 SEPT11Q9NVA2 429 aaKnown RBP10.89□□□□□ -0.67
PTPRT-206ENST00000373198 AXDND1Q5T1B0 1012 aaPredicted RBP10.89□□□□□ -0.67
PTPRT-206ENST00000373198 SMC2O95347 1197 aa10.88□□□□□ -0.67
PTPRT-206ENST00000373198 MYCNP04198 464 aaPredicted RBP10.88□□□□□ -0.67
PTPRT-206ENST00000373198 KIF27Q86VH2 1401 aa10.88□□□□□ -0.67
PTPRT-206ENST00000373198 SMC3Q9UQE7 1217 aa10.88□□□□□ -0.67
PTPRT-206ENST00000373198 ANKRD18AQ8IVF6 992 aa10.88□□□□□ -0.67
PTPRT-206ENST00000373198 PSMD1Q99460 953 aa10.88□□□□□ -0.67
PTPRT-206ENST00000373198 CWC15Q9P013 229 aaKnown RBP10.88□□□□□ -0.67
PTPRT-206ENST00000373198 TAX1BP1Q86VP1 789 aa10.87□□□□□ -0.67
PTPRT-206ENST00000373198 ERLIN2O94905 339 aa10.87□□□□□ -0.67
PTPRT-206ENST00000373198 DDX58O95786 925 aaKnown RBP10.87□□□□□ -0.67
PTPRT-206ENST00000373198 SSR1P43307 286 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms