RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
VCL-202ENST00000372755 RNF20Q5VTR2 975 aa14.09□□□□□ -0.15
VCL-202ENST00000372755 ANO2Q9NQ90 1003 aa14.09□□□□□ -0.15
VCL-202ENST00000372755 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
VCL-202ENST00000372755 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
VCL-202ENST00000372755 DDX58O95786 925 aaKnown RBP14.08□□□□□ -0.16
VCL-202ENST00000372755 API5Q9BZZ5 524 aaKnown RBP14.08□□□□□ -0.16
VCL-202ENST00000372755 TRDNQ13061 729 aa14.08□□□□□ -0.16
VCL-202ENST00000372755 RRP1P56182 461 aaKnown RBP14.07□□□□□ -0.16
VCL-202ENST00000372755 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
VCL-202ENST00000372755 RAD21O60216 631 aa14.07□□□□□ -0.16
VCL-202ENST00000372755 BCL2L13Q9BXK5 485 aa14.07□□□□□ -0.16
VCL-202ENST00000372755 ST20-MTHFSA0A0A6YYL1 179 aa14.07□□□□□ -0.16
VCL-202ENST00000372755 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
VCL-202ENST00000372755 APPP05067 770 aa14.06□□□□□ -0.16
VCL-202ENST00000372755 GSE1Q14687 1217 aa14.06□□□□□ -0.16
VCL-202ENST00000372755 MSH5O43196 834 aa14.06□□□□□ -0.16
VCL-202ENST00000372755 FOXD4L6Q3SYB3 417 aaPredicted RBP14.06□□□□□ -0.16
VCL-202ENST00000372755 FOXD4L3Q6VB84 417 aaPredicted RBP14.06□□□□□ -0.16
VCL-202ENST00000372755 DHX16O60231 1041 aaKnown RBP14.05□□□□□ -0.16
VCL-202ENST00000372755 EIF2S2P20042 333 aaKnown RBP14.05□□□□□ -0.16
VCL-202ENST00000372755 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
VCL-202ENST00000372755 WWC1Q8IX03 1113 aa14.05□□□□□ -0.16
VCL-202ENST00000372755 ZNF592Q92610 1267 aa14.05□□□□□ -0.16
VCL-202ENST00000372755 ANO8Q9HCE9 1232 aaPredicted RBP14.05□□□□□ -0.16
VCL-202ENST00000372755 ERICH2A1L162 156 aa14.05□□□□□ -0.16
VCL-202ENST00000372755 G3BP1Q13283 466 aaKnown RBP eCLIP14.04□□□□□ -0.163e-6■■■□□ 19
VCL-202ENST00000372755 BICD2Q8TD16 824 aa14.04□□□□□ -0.16
VCL-202ENST00000372755 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
VCL-202ENST00000372755 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
VCL-202ENST00000372755 CRBNQ96SW2 442 aa14.04□□□□□ -0.16
VCL-202ENST00000372755 COG6Q9Y2V7 657 aa14.04□□□□□ -0.16
VCL-202ENST00000372755 DIAPH1O60610 1272 aaKnown RBP14.04□□□□□ -0.16
VCL-202ENST00000372755 TEX35Q5T0J7 233 aa14.04□□□□□ -0.16
VCL-202ENST00000372755 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
VCL-202ENST00000372755 HSP90AB4PQ58FF6 505 aa14.03□□□□□ -0.16
VCL-202ENST00000372755 NFXL1Q6ZNB6 911 aa14.03□□□□□ -0.16
VCL-202ENST00000372755 EXOC6Q8TAG9 804 aa14.03□□□□□ -0.16
VCL-202ENST00000372755 CCDC43Q96MW1 224 aaKnown RBP14.03□□□□□ -0.16
VCL-202ENST00000372755 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.16
VCL-202ENST00000372755 CDR1P51861 262 aa14.02□□□□□ -0.16
VCL-202ENST00000372755 HOMER1Q86YM7 354 aa14.02□□□□□ -0.16
VCL-202ENST00000372755 ZBED9Q6R2W3 1325 aa14.02□□□□□ -0.16
VCL-202ENST00000372755 PLIN1O60240 522 aa14.02□□□□□ -0.17
VCL-202ENST00000372755 DZIP1LQ8IYY4 767 aaKnown RBP14.02□□□□□ -0.17
VCL-202ENST00000372755 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
VCL-202ENST00000372755 SAFBQ15424 915 aaKnown RBP eCLIP14.01□□□□□ -0.17
VCL-202ENST00000372755 ZNF771Q7L3S4 317 aaPredicted RBP14.01□□□□□ -0.17
VCL-202ENST00000372755 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
VCL-202ENST00000372755 INTS3Q68E01 1043 aaKnown RBP14.01□□□□□ -0.17
VCL-202ENST00000372755 SASS6Q6UVJ0 657 aa14.01□□□□□ -0.17
VCL-202ENST00000372755 ERC2O15083 957 aa14□□□□□ -0.17
VCL-202ENST00000372755 PATL2C9JE40 543 aaKnown RBP14□□□□□ -0.17
VCL-202ENST00000372755 SMC3Q9UQE7 1217 aa14□□□□□ -0.17
VCL-202ENST00000372755 KRI1Q8N9T8 703 aaKnown RBP14□□□□□ -0.17
VCL-202ENST00000372755 SLC4A3P48751 1232 aa14□□□□□ -0.17
VCL-202ENST00000372755 MINK1Q8N4C8 1332 aaPredicted RBP13.99□□□□□ -0.17
VCL-202ENST00000372755 NUCB2P80303 420 aa13.99□□□□□ -0.17
VCL-202ENST00000372755 ACBD3Q9H3P7 528 aa13.99□□□□□ -0.17
VCL-202ENST00000372755 PRKRIP1Q9H875 184 aaPredicted RBP13.99□□□□□ -0.17
VCL-202ENST00000372755 RIPK4P57078 832 aa13.99□□□□□ -0.17
VCL-202ENST00000372755 CCDC73Q6ZRK6 1079 aa13.99□□□□□ -0.17
VCL-202ENST00000372755 AK7Q96M32 723 aa13.99□□□□□ -0.17
VCL-202ENST00000372755 FKBP5Q13451 457 aaPredicted RBP13.99□□□□□ -0.17
VCL-202ENST00000372755 FBXW7Q969H0 707 aa13.98□□□□□ -0.17
VCL-202ENST00000372755 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
VCL-202ENST00000372755 USP47Q96K76 1375 aa13.98□□□□□ -0.17
VCL-202ENST00000372755 APAF1O14727 1248 aa13.98□□□□□ -0.17
VCL-202ENST00000372755 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
VCL-202ENST00000372755 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
VCL-202ENST00000372755 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
VCL-202ENST00000372755 RRP12Q5JTH9 1297 aaKnown RBP13.97□□□□□ -0.17
VCL-202ENST00000372755 ARGLU1Q9NWB6 273 aaPredicted RBP13.97□□□□□ -0.17
VCL-202ENST00000372755 GNAI1P63096 354 aa13.97□□□□□ -0.17
VCL-202ENST00000372755 CT47A1Q5JQC4 288 aaPredicted RBP13.96□□□□□ -0.17
VCL-202ENST00000372755 AAMPQ13685 434 aa13.96□□□□□ -0.17
VCL-202ENST00000372755 BRMS1Q9HCU9 246 aa13.96□□□□□ -0.17
VCL-202ENST00000372755 PSME1Q06323 249 aa13.96□□□□□ -0.17
VCL-202ENST00000372755 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.96□□□□□ -0.17
VCL-202ENST00000372755 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
VCL-202ENST00000372755 RALYLQ86SE5 291 aaKnown RBP13.96□□□□□ -0.18
VCL-202ENST00000372755 RUNDC1Q96C34 613 aa13.96□□□□□ -0.18
VCL-202ENST00000372755 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.18
VCL-202ENST00000372755 NAP1L1P55209 391 aaKnown RBP13.95□□□□□ -0.18
VCL-202ENST00000372755 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
VCL-202ENST00000372755 ODF2Q5BJF6 829 aa13.95□□□□□ -0.18
VCL-202ENST00000372755 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.95□□□□□ -0.18
VCL-202ENST00000372755 MNS1Q8NEH6 495 aa13.95□□□□□ -0.18
VCL-202ENST00000372755 SYTL4Q96C24 671 aaPredicted RBP13.95□□□□□ -0.18
VCL-202ENST00000372755 NAT10Q9H0A0 1025 aaKnown RBP13.94□□□□□ -0.18
VCL-202ENST00000372755 OLFM4Q6UX06 510 aa13.94□□□□□ -0.18
VCL-202ENST00000372755 TSPYL4Q9UJ04 414 aa13.94□□□□□ -0.18
VCL-202ENST00000372755 XBP1P17861 261 aa13.94□□□□□ -0.18
VCL-202ENST00000372755 MEX3CQ5U5Q3 659 aaKnown RBP13.94□□□□□ -0.18
VCL-202ENST00000372755 R3HCC1Q9Y3T6 440 aaKnown RBP13.93□□□□□ -0.18
VCL-202ENST00000372755 NINLQ9Y2I6 1382 aa13.93□□□□□ -0.18
VCL-202ENST00000372755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.92□□□□□ -0.18
VCL-202ENST00000372755 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
VCL-202ENST00000372755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.188e-7■■■■■ 34.2
VCL-202ENST00000372755 RAPGEF4Q8WZA2 1011 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 271.6 ms