RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 ARID3AQ99856 593 aa11.55□□□□□ -0.56
SPTAN1-203ENST00000372739 REC8O95072 547 aa11.55□□□□□ -0.56
SPTAN1-203ENST00000372739 BECN2A8MW95 431 aa11.54□□□□□ -0.56
SPTAN1-203ENST00000372739 NGEFQ8N5V2 710 aa11.54□□□□□ -0.56
SPTAN1-203ENST00000372739 DDX58O95786 925 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-203ENST00000372739 FOXD4L5Q5VV16 416 aaPredicted RBP11.54□□□□□ -0.56
SPTAN1-203ENST00000372739 FOXD4L4Q8WXT5 416 aaPredicted RBP11.54□□□□□ -0.56
SPTAN1-203ENST00000372739 CTDP1Q9Y5B0 961 aaPredicted RBP11.54□□□□□ -0.56
SPTAN1-203ENST00000372739 CCDC47Q96A33 483 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-203ENST00000372739 HOOK1Q9UJC3 728 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-203ENST00000372739 ZKSCAN1P17029 563 aaPredicted RBP11.53□□□□□ -0.56
SPTAN1-203ENST00000372739 USP47Q96K76 1375 aa11.53□□□□□ -0.56
SPTAN1-203ENST00000372739 NCAPD3P42695 1498 aa11.53□□□□□ -0.56
SPTAN1-203ENST00000372739 DDX19BQ9UMR2 479 aa11.53□□□□□ -0.56
SPTAN1-203ENST00000372739 MCTP1Q6DN14 999 aa11.52□□□□□ -0.57
SPTAN1-203ENST00000372739 ANKRD20A12PQ8NF67 263 aa11.52□□□□□ -0.57
SPTAN1-203ENST00000372739 CWC22Q9HCG8 908 aaKnown RBP11.52□□□□□ -0.57
SPTAN1-203ENST00000372739 DDX49Q9Y6V7 483 aaKnown RBP11.52□□□□□ -0.57
SPTAN1-203ENST00000372739 CUX1P39880 1505 aa11.52□□□□□ -0.57
SPTAN1-203ENST00000372739 SETQ01105 290 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-203ENST00000372739 GPS2Q13227 327 aa11.51□□□□□ -0.57
SPTAN1-203ENST00000372739 RNF20Q5VTR2 975 aa11.51□□□□□ -0.57
SPTAN1-203ENST00000372739 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
SPTAN1-203ENST00000372739 ZBED9Q6R2W3 1325 aa11.51□□□□□ -0.57
SPTAN1-203ENST00000372739 IFIT2P09913 472 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-203ENST00000372739 RRP1P56182 461 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-203ENST00000372739 TRDNQ13061 729 aa11.51□□□□□ -0.57
SPTAN1-203ENST00000372739 PTPRGP23470 1445 aa11.5□□□□□ -0.57
SPTAN1-203ENST00000372739 DIAPH1O60610 1272 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-203ENST00000372739 ELL2O00472 640 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-203ENST00000372739 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-203ENST00000372739 IPO7O95373 1038 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-203ENST00000372739 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.5□□□□□ -0.57
SPTAN1-203ENST00000372739 PSME1Q06323 249 aa11.5□□□□□ -0.57
SPTAN1-203ENST00000372739 EIF2S2P20042 333 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-203ENST00000372739 BCL2L13Q9BXK5 485 aa11.49□□□□□ -0.57
SPTAN1-203ENST00000372739 ANO2Q9NQ90 1003 aa11.49□□□□□ -0.57
SPTAN1-203ENST00000372739 CPLX1O14810 134 aa11.49□□□□□ -0.57
SPTAN1-203ENST00000372739 APPP05067 770 aa11.49□□□□□ -0.57
SPTAN1-203ENST00000372739 ERICH2A1L162 156 aa11.49□□□□□ -0.57
SPTAN1-203ENST00000372739 MINK1Q8N4C8 1332 aaPredicted RBP11.49□□□□□ -0.57
SPTAN1-203ENST00000372739 MIA2Q96PC5 1412 aa11.48□□□□□ -0.57
SPTAN1-203ENST00000372739 G3BP1Q13283 466 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■■■□□ 18.5
SPTAN1-203ENST00000372739 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
SPTAN1-203ENST00000372739 FANCD2Q9BXW9 1451 aa11.48□□□□□ -0.57
SPTAN1-203ENST00000372739 CC2D2AQ9P2K1 1620 aa11.48□□□□□ -0.57
SPTAN1-203ENST00000372739 HMGXB3Q12766 1538 aa11.48□□□□□ -0.57
SPTAN1-203ENST00000372739 PDE4AP27815 886 aa11.48□□□□□ -0.57
SPTAN1-203ENST00000372739 CCAR2Q8N163 923 aaKnown RBP11.47□□□□□ -0.57
SPTAN1-203ENST00000372739 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
SPTAN1-203ENST00000372739 RAD21O60216 631 aa11.47□□□□□ -0.57
SPTAN1-203ENST00000372739 HSP90AB4PQ58FF6 505 aa11.47□□□□□ -0.57
SPTAN1-203ENST00000372739 CRBNQ96SW2 442 aa11.47□□□□□ -0.57
SPTAN1-203ENST00000372739 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
SPTAN1-203ENST00000372739 RIPK4P57078 832 aa11.46□□□□□ -0.57
SPTAN1-203ENST00000372739 DZIP1LQ8IYY4 767 aaKnown RBP11.46□□□□□ -0.58
SPTAN1-203ENST00000372739 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.58
SPTAN1-203ENST00000372739 ERC2O15083 957 aa11.46□□□□□ -0.58
SPTAN1-203ENST00000372739 MYOM3Q5VTT5 1437 aa11.46□□□□□ -0.58
SPTAN1-203ENST00000372739 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 COG6Q9Y2V7 657 aa11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 DHX16O60231 1041 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 DHX57Q6P158 1386 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 PLIN1O60240 522 aa11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 FOXD4L6Q3SYB3 417 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 FOXD4L3Q6VB84 417 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 CCDC43Q96MW1 224 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-203ENST00000372739 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-203ENST00000372739 AAMPQ13685 434 aa11.44□□□□□ -0.58
SPTAN1-203ENST00000372739 GNAI1P63096 354 aa11.44□□□□□ -0.58
SPTAN1-203ENST00000372739 SAFBQ15424 915 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPTAN1-203ENST00000372739 APAF1O14727 1248 aa11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 BICD2Q8TD16 824 aa11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 RSPH6AQ9H0K4 717 aa11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 WWC1Q8IX03 1113 aa11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 GSE1Q14687 1217 aa11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 NINLQ9Y2I6 1382 aa11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 EXOC6Q8TAG9 804 aa11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 RBM33Q96EV2 1170 aaKnown RBP11.43□□□□□ -0.58
SPTAN1-203ENST00000372739 TSPYL4Q9UJ04 414 aa11.42□□□□□ -0.58
SPTAN1-203ENST00000372739 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
SPTAN1-203ENST00000372739 SMC3Q9UQE7 1217 aa11.42□□□□□ -0.58
SPTAN1-203ENST00000372739 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
SPTAN1-203ENST00000372739 ATF3P18847 181 aa11.41□□□□□ -0.58
SPTAN1-203ENST00000372739 NUCB2P80303 420 aa11.41□□□□□ -0.58
SPTAN1-203ENST00000372739 SASS6Q6UVJ0 657 aa11.41□□□□□ -0.58
SPTAN1-203ENST00000372739 RAPGEF4Q8WZA2 1011 aa11.41□□□□□ -0.58
SPTAN1-203ENST00000372739 BRMS1Q9HCU9 246 aa11.41□□□□□ -0.58
SPTAN1-203ENST00000372739 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
SPTAN1-203ENST00000372739 WASHC2AQ641Q2 1341 aa11.41□□□□□ -0.58
SPTAN1-203ENST00000372739 ZNF592Q92610 1267 aa11.4□□□□□ -0.58
SPTAN1-203ENST00000372739 RALYLQ86SE5 291 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-203ENST00000372739 CHMP5Q9NZZ3 219 aa11.4□□□□□ -0.58
SPTAN1-203ENST00000372739 RIC3Q7Z5B4 369 aa11.4□□□□□ -0.58
SPTAN1-203ENST00000372739 HOMER1Q86YM7 354 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms