RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SCAF11Q99590 1463 aaKnown RBP34.4■■■■□ 3.1
CTSA-203ENST00000372459 SYNMO15061 1565 aa34.39■■■■□ 3.1
CTSA-203ENST00000372459 NRXN1Q9ULB1 1477 aa34.39■■■■□ 3.1
CTSA-203ENST00000372459 ADGRF5Q8IZF2 1346 aa34.38■■■■□ 3.09
CTSA-203ENST00000372459 RPGRIP1LQ68CZ1 1315 aa34.36■■■■□ 3.09
CTSA-203ENST00000372459 PPP6R1Q9UPN7 881 aa34.35■■■■□ 3.09
CTSA-203ENST00000372459 TMF1P82094 1093 aa34.34■■■■□ 3.09
CTSA-203ENST00000372459 PPLO60437 1756 aa34.34■■■■□ 3.09
CTSA-203ENST00000372459 ARHGEF40Q8TER5 1519 aa34.33■■■■□ 3.09
CTSA-203ENST00000372459 DISP3Q9P2K9 1392 aa34.32■■■■□ 3.08
CTSA-203ENST00000372459 EIF3AQ14152 1382 aaKnown RBP34.31■■■■□ 3.08
CTSA-203ENST00000372459 PREX1Q8TCU6 1659 aa34.3■■■■□ 3.08
CTSA-203ENST00000372459 CFAP70Q5T0N1 1121 aa34.3■■■■□ 3.08
CTSA-203ENST00000372459 SLC52A1Q9NWF4 448 aa34.29■■■■□ 3.08
CTSA-203ENST00000372459 PIK3C2GO75747 1445 aa34.24■■■■□ 3.07
CTSA-203ENST00000372459 IDI1Q13907 227 aa34.23■■■■□ 3.07
CTSA-203ENST00000372459 SETBP1Q9Y6X0 1596 aa34.23■■■■□ 3.07
CTSA-203ENST00000372459 CCDC184Q52MB2 194 aa34.22■■■■□ 3.07
CTSA-203ENST00000372459 MRS2Q9HD23 443 aa34.22■■■■□ 3.07
CTSA-203ENST00000372459 NEXMIFQ5QGS0 1516 aa34.19■■■■□ 3.06
CTSA-203ENST00000372459 CLTCQ00610 1675 aaKnown RBP34.19■■■■□ 3.06
CTSA-203ENST00000372459 CDCA8Q53HL2 280 aa34.18■■■■□ 3.06
CTSA-203ENST00000372459 KTN1Q86UP2 1357 aaKnown RBP34.18■■■■□ 3.06
CTSA-203ENST00000372459 ERVK-7P63135 1459 aa34.18■■■■□ 3.06
CTSA-203ENST00000372459 C14orf93Q9H972 538 aaKnown RBP34.17■■■■□ 3.06
CTSA-203ENST00000372459 VGFO15240 615 aaPredicted RBP34.16■■■■□ 3.06
CTSA-203ENST00000372459 SLC24A1O60721 1099 aa34.16■■■■□ 3.06
CTSA-203ENST00000372459 CNGB1Q14028 1251 aaPredicted RBP34.12■■■■□ 3.05
CTSA-203ENST00000372459 FBXO31Q5XUX0 539 aaPredicted RBP34.12■■■■□ 3.05
CTSA-203ENST00000372459 TMEM131LA2VDJ0 1609 aa34.12■■■■□ 3.05
CTSA-203ENST00000372459 RALBP1Q15311 655 aa34.11■■■■□ 3.05
CTSA-203ENST00000372459 MLECQ14165 292 aa34.11■■■■□ 3.05
CTSA-203ENST00000372459 MYO3AQ8NEV4 1616 aa34.1■■■■□ 3.05
CTSA-203ENST00000372459 ZFYVE9O95405 1425 aa34.1■■■■□ 3.05
CTSA-203ENST00000372459 PER1O15534 1290 aaPredicted RBP34.09■■■■□ 3.05
CTSA-203ENST00000372459 ADGRB1O14514 1584 aa34.08■■■■□ 3.05
CTSA-203ENST00000372459 MYO5BQ9ULV0 1848 aa34.08■■■■□ 3.05
CTSA-203ENST00000372459 HNRNPUQ00839 825 aaKnown RBP eCLIP34.07■■■■□ 3.05
CTSA-203ENST00000372459 PANK3Q9H999 370 aa34.07■■■■□ 3.04
CTSA-203ENST00000372459 SPATA31D1Q6ZQQ2 1576 aa34.06■■■■□ 3.04
CTSA-203ENST00000372459 FAM9BQ8IZU0 186 aa34.05■■■■□ 3.04
CTSA-203ENST00000372459 SBNO2Q9Y2G9 1366 aa34.03■■■■□ 3.04
CTSA-203ENST00000372459 MYBBP1AQ9BQG0 1328 aaKnown RBP34.03■■■■□ 3.04
CTSA-203ENST00000372459 NUTM2DQ5VT03 806 aaPredicted RBP34.03■■■■□ 3.04
CTSA-203ENST00000372459 ESF1Q9H501 851 aaKnown RBP34.03■■■■□ 3.04
CTSA-203ENST00000372459 KDM5AP29375 1690 aaKnown RBP34.02■■■■□ 3.04
CTSA-203ENST00000372459 CENPJQ9HC77 1338 aaPredicted RBP34■■■■□ 3.03
CTSA-203ENST00000372459 PARD3Q8TEW0 1356 aa34■■■■□ 3.03
CTSA-203ENST00000372459 STAG3Q9UJ98 1225 aa33.98■■■■□ 3.03
CTSA-203ENST00000372459 TRAK1Q9UPV9 953 aa33.98■■■■□ 3.03
CTSA-203ENST00000372459 TMEM132EQ6IEE7 984 aa33.97■■■■□ 3.03
CTSA-203ENST00000372459 BRD4O60885 1362 aaPredicted RBP33.96■■■■□ 3.03
CTSA-203ENST00000372459 TMC1Q8TDI8 760 aa33.95■■■■□ 3.03
CTSA-203ENST00000372459 ZMYM3Q14202 1370 aa33.95■■■■□ 3.03
CTSA-203ENST00000372459 MYOM1P52179 1685 aa33.94■■■■□ 3.02
CTSA-203ENST00000372459 QRICH2Q9H0J4 1663 aa33.91■■■■□ 3.02
CTSA-203ENST00000372459 NLRP13Q86W25 1043 aa33.89■■■■□ 3.02
CTSA-203ENST00000372459 A2ML1A8K2U0 1454 aa33.88■■■■□ 3.01
CTSA-203ENST00000372459 CC2D1BQ5T0F9 858 aaKnown RBP33.88■■■■□ 3.01
CTSA-203ENST00000372459 KNSTRNQ9Y448 316 aa33.88■■■■□ 3.01
CTSA-203ENST00000372459 PNISRQ8TF01 805 aaKnown RBP33.87■■■■□ 3.01
CTSA-203ENST00000372459 ARHGEF28Q8N1W1 1705 aaKnown RBP33.86■■■■□ 3.01
CTSA-203ENST00000372459 TRHP20396 242 aaPredicted RBP33.85■■■■□ 3.01
CTSA-203ENST00000372459 ZBED9Q6R2W3 1325 aa33.82■■■■□ 3.01
CTSA-203ENST00000372459 ASXL1Q8IXJ9 1541 aa33.82■■■■□ 3
CTSA-203ENST00000372459 RIMS2Q9UQ26 1411 aa33.79■■■■□ 3
CTSA-203ENST00000372459 AMER1Q5JTC6 1135 aaPredicted RBP33.78■■■■□ 3
CTSA-203ENST00000372459 ALKQ9UM73 1620 aa33.78■■■■□ 3
CTSA-203ENST00000372459 TNRQ92752 1358 aa33.77■■■■□ 3
CTSA-203ENST00000372459 LRPPRCP42704 1394 aaKnown RBP33.76■■■■□ 3
CTSA-203ENST00000372459 NPC1L1Q9UHC9 1359 aa33.76■■■■□ 3
CTSA-203ENST00000372459 SUPT16HQ9Y5B9 1047 aaKnown RBP33.76■■■□□ 2.99
CTSA-203ENST00000372459 PUS7Q96PZ0 661 aaKnown RBP33.72■■■□□ 2.99
CTSA-203ENST00000372459 YTHDC2Q9H6S0 1430 aaKnown RBP33.72■■■□□ 2.99
CTSA-203ENST00000372459 EVC2Q86UK5 1308 aa33.72■■■□□ 2.99
CTSA-203ENST00000372459 SENP3Q9H4L4 574 aaPredicted RBP33.71■■■□□ 2.99
CTSA-203ENST00000372459 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.71■■■□□ 2.99
CTSA-203ENST00000372459 STK26Q9P289 416 aa33.71■■■□□ 2.99
CTSA-203ENST00000372459 PTPRMP28827 1452 aa33.68■■■□□ 2.98
CTSA-203ENST00000372459 TULP4Q9NRJ4 1543 aa33.67■■■□□ 2.98
CTSA-203ENST00000372459 HDGFP51858 240 aaKnown RBP33.65■■■□□ 2.98
CTSA-203ENST00000372459 CARD14Q9BXL6 1004 aa33.63■■■□□ 2.97
CTSA-203ENST00000372459 PPP2R1AP30153 589 aa33.61■■■□□ 2.97
CTSA-203ENST00000372459 SETD1AO15047 1707 aaKnown RBP33.61■■■□□ 2.97
CTSA-203ENST00000372459 UBR1Q8IWV7 1749 aa33.61■■■□□ 2.97
CTSA-203ENST00000372459 NEFLP07196 543 aa33.6■■■□□ 2.97
CTSA-203ENST00000372459 SAFB2Q14151 953 aaKnown RBP eCLIP33.6■■■□□ 2.97
CTSA-203ENST00000372459 PRAM1Q96QH2 718 aa33.6■■■□□ 2.97
CTSA-203ENST00000372459 POGKQ9P215 609 aa33.6■■■□□ 2.97
CTSA-203ENST00000372459 SLC12A5Q9H2X9 1139 aa33.59■■■□□ 2.97
CTSA-203ENST00000372459 NLRP1Q9C000 1473 aa33.59■■■□□ 2.97
CTSA-203ENST00000372459 DLC1Q96QB1 1528 aa33.57■■■□□ 2.96
CTSA-203ENST00000372459 INSRP06213 1382 aa33.57■■■□□ 2.96
CTSA-203ENST00000372459 FER1L4A9Z1Z3 1794 aa33.57■■■□□ 2.96
CTSA-203ENST00000372459 NRXN3Q9Y4C0 1643 aa33.57■■■□□ 2.96
CTSA-203ENST00000372459 TMEM2Q9UHN6 1383 aa33.55■■■□□ 2.96
CTSA-203ENST00000372459 C3P01024 1663 aa33.55■■■□□ 2.96
CTSA-203ENST00000372459 NSD3Q9BZ95 1437 aa33.54■■■□□ 2.96
CTSA-203ENST00000372459 FKBP8Q14318 412 aa33.54■■■□□ 2.96
CTSA-203ENST00000372459 CABP2Q9NPB3 220 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms