RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
PREX1-201ENST00000371941 DIAPH1O60610 1272 aaKnown RBP16.77■□□□□ 0.27
PREX1-201ENST00000371941 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
PREX1-201ENST00000371941 PPP2R1AP30153 589 aa16.76■□□□□ 0.27
PREX1-201ENST00000371941 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
PREX1-201ENST00000371941 NFKBIBQ15653 356 aa16.76■□□□□ 0.27
PREX1-201ENST00000371941 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
PREX1-201ENST00000371941 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
PREX1-201ENST00000371941 FOSBP53539 338 aa16.75■□□□□ 0.27
PREX1-201ENST00000371941 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
PREX1-201ENST00000371941 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
PREX1-201ENST00000371941 PCF11O94913 1555 aaKnown RBP16.74■□□□□ 0.27
PREX1-201ENST00000371941 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
PREX1-201ENST00000371941 IL27Q8NEV9 243 aa16.74■□□□□ 0.27
PREX1-201ENST00000371941 MSH5O43196 834 aa16.73■□□□□ 0.27
PREX1-201ENST00000371941 HMMRO75330 724 aa16.73■□□□□ 0.27
PREX1-201ENST00000371941 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
PREX1-201ENST00000371941 CREBRFQ8IUR6 639 aa16.73■□□□□ 0.27
PREX1-201ENST00000371941 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
PREX1-201ENST00000371941 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
PREX1-201ENST00000371941 TCP11L2Q8N4U5 519 aa16.71■□□□□ 0.27
PREX1-201ENST00000371941 TAF7LQ5H9L4 462 aa16.71■□□□□ 0.27
PREX1-201ENST00000371941 EID1Q9Y6B2 187 aa16.71■□□□□ 0.27
PREX1-201ENST00000371941 GOLGA6L6A8MZA4 724 aa16.71■□□□□ 0.27
PREX1-201ENST00000371941 ST18O60284 1047 aa16.7■□□□□ 0.26
PREX1-201ENST00000371941 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
PREX1-201ENST00000371941 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
PREX1-201ENST00000371941 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
PREX1-201ENST00000371941 FBXW7Q969H0 707 aa16.7■□□□□ 0.26
PREX1-201ENST00000371941 C20orf194Q5TEA3 1177 aa16.69■□□□□ 0.26
PREX1-201ENST00000371941 EXOSC9Q06265 439 aaKnown RBP16.68■□□□□ 0.26
PREX1-201ENST00000371941 LMOD3Q0VAK6 560 aa16.68■□□□□ 0.26
PREX1-201ENST00000371941 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
PREX1-201ENST00000371941 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
PREX1-201ENST00000371941 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
PREX1-201ENST00000371941 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
PREX1-201ENST00000371941 DDX19BQ9UMR2 479 aa16.67■□□□□ 0.26
PREX1-201ENST00000371941 C22orf23Q9BZE7 217 aa16.67■□□□□ 0.26
PREX1-201ENST00000371941 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
PREX1-201ENST00000371941 KDM4AO75164 1064 aa16.67■□□□□ 0.26
PREX1-201ENST00000371941 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
PREX1-201ENST00000371941 TOMM22Q9NS69 142 aa16.67■□□□□ 0.26
PREX1-201ENST00000371941 SUPT6HQ7KZ85 1726 aaKnown RBP16.66■□□□□ 0.26
PREX1-201ENST00000371941 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
PREX1-201ENST00000371941 FKBP5Q13451 457 aaPredicted RBP16.66■□□□□ 0.26
PREX1-201ENST00000371941 GPATCH3Q96I76 525 aa16.66■□□□□ 0.26
PREX1-201ENST00000371941 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
PREX1-201ENST00000371941 NOB1Q9ULX3 412 aaKnown RBP16.65■□□□□ 0.26
PREX1-201ENST00000371941 AIMP1Q12904 312 aaKnown RBP16.65■□□□□ 0.26
PREX1-201ENST00000371941 C9orf84Q5VXU9 1444 aa16.64■□□□□ 0.26
PREX1-201ENST00000371941 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
PREX1-201ENST00000371941 DDX11L8A8MPP1 907 aa16.64■□□□□ 0.25
PREX1-201ENST00000371941 DAPK1P53355 1430 aa16.64■□□□□ 0.25
PREX1-201ENST00000371941 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
PREX1-201ENST00000371941 TSPYL4Q9UJ04 414 aa16.64■□□□□ 0.25
PREX1-201ENST00000371941 KIF16BQ96L93 1317 aa16.63■□□□□ 0.25
PREX1-201ENST00000371941 CLSTN1O94985 981 aa16.63■□□□□ 0.25
PREX1-201ENST00000371941 HFM1A2PYH4 1435 aa16.63■□□□□ 0.25
PREX1-201ENST00000371941 USP35Q9P2H5 1018 aa16.63■□□□□ 0.25
PREX1-201ENST00000371941 NAIPQ13075 1403 aa16.63■□□□□ 0.25
PREX1-201ENST00000371941 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
PREX1-201ENST00000371941 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
PREX1-201ENST00000371941 EHBP1L1Q8N3D4 1523 aa16.62■□□□□ 0.25
PREX1-201ENST00000371941 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
PREX1-201ENST00000371941 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
PREX1-201ENST00000371941 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
PREX1-201ENST00000371941 PRKAR2BP31323 418 aa16.61■□□□□ 0.25
PREX1-201ENST00000371941 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
PREX1-201ENST00000371941 MAP4K4O95819 1239 aaPredicted RBP16.61■□□□□ 0.25
PREX1-201ENST00000371941 TEFQ10587 303 aa16.6■□□□□ 0.25
PREX1-201ENST00000371941 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
PREX1-201ENST00000371941 MPNDQ8N594 471 aa16.6■□□□□ 0.25
PREX1-201ENST00000371941 SNAPC4Q5SXM2 1469 aa16.59■□□□□ 0.25
PREX1-201ENST00000371941 PDE4CQ08493 712 aa16.59■□□□□ 0.25
PREX1-201ENST00000371941 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
PREX1-201ENST00000371941 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
PREX1-201ENST00000371941 H3BQV1 296 aa16.58■□□□□ 0.25
PREX1-201ENST00000371941 IFFO2Q5TF58 517 aa16.58■□□□□ 0.25
PREX1-201ENST00000371941 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.25
PREX1-201ENST00000371941 MIA2Q96PC5 1412 aa16.58■□□□□ 0.24
PREX1-201ENST00000371941 PTPN23Q9H3S7 1636 aa16.58■□□□□ 0.24
PREX1-201ENST00000371941 PTMSP20962 102 aa16.57■□□□□ 0.24
PREX1-201ENST00000371941 NRDCO43847 1150 aa16.57■□□□□ 0.24
PREX1-201ENST00000371941 RNF214Q8ND24 703 aa16.57■□□□□ 0.24
PREX1-201ENST00000371941 DIAPH3Q9NSV4 1193 aa16.57■□□□□ 0.24
PREX1-201ENST00000371941 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
PREX1-201ENST00000371941 CCDC27Q2M243 656 aa16.57■□□□□ 0.24
PREX1-201ENST00000371941 BACH2Q9BYV9 841 aa16.57■□□□□ 0.24
PREX1-201ENST00000371941 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
PREX1-201ENST00000371941 CHMP5Q9NZZ3 219 aa16.56■□□□□ 0.24
PREX1-201ENST00000371941 ARHGEF11O15085 1522 aa16.56■□□□□ 0.24
PREX1-201ENST00000371941 ERBINQ96RT1 1412 aa16.56■□□□□ 0.24
PREX1-201ENST00000371941 PSME1Q06323 249 aa16.56■□□□□ 0.24
PREX1-201ENST00000371941 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
PREX1-201ENST00000371941 HECW1Q76N89 1606 aa16.55■□□□□ 0.24
PREX1-201ENST00000371941 SYTL4Q96C24 671 aaPredicted RBP16.55■□□□□ 0.24
PREX1-201ENST00000371941 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
PREX1-201ENST00000371941 ZNF592Q92610 1267 aa16.55■□□□□ 0.24
PREX1-201ENST00000371941 SCAPERQ9BY12 1400 aa16.55■□□□□ 0.24
PREX1-201ENST00000371941 RAPGEF3O95398 923 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms