RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 CHIC2Q9UKJ5 165 aa23.43■■□□□ 1.34
RPF1-202ENST00000370656 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
RPF1-202ENST00000370656 BCANQ96GW7 911 aa23.42■■□□□ 1.34
RPF1-202ENST00000370656 SLC52A1Q9NWF4 448 aa23.42■■□□□ 1.34
RPF1-202ENST00000370656 NOS1P29475 1434 aa23.41■■□□□ 1.34
RPF1-202ENST00000370656 NWD1Q149M9 1564 aa23.4■■□□□ 1.34
RPF1-202ENST00000370656 MSH6P52701 1360 aa23.39■■□□□ 1.33
RPF1-202ENST00000370656 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
RPF1-202ENST00000370656 RBM33Q96EV2 1170 aaKnown RBP23.36■■□□□ 1.33
RPF1-202ENST00000370656 RPRD2Q5VT52 1461 aaKnown RBP23.36■■□□□ 1.33
RPF1-202ENST00000370656 PHLPP1O60346 1717 aa23.34■■□□□ 1.33
RPF1-202ENST00000370656 ADGRL2O95490 1459 aa23.33■■□□□ 1.33
RPF1-202ENST00000370656 CHD2O14647 1828 aaKnown RBP23.33■■□□□ 1.32
RPF1-202ENST00000370656 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.32
RPF1-202ENST00000370656 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
RPF1-202ENST00000370656 SLAIN2Q9P270 581 aa23.32■■□□□ 1.32
RPF1-202ENST00000370656 GCC2Q8IWJ2 1684 aa23.31■■□□□ 1.32
RPF1-202ENST00000370656 PLEKHG1Q9ULL1 1385 aa23.3■■□□□ 1.32
RPF1-202ENST00000370656 ANKRD50Q9ULJ7 1429 aa23.29■■□□□ 1.32
RPF1-202ENST00000370656 JCADQ9P266 1359 aa23.28■■□□□ 1.32
RPF1-202ENST00000370656 ZFYVE9O95405 1425 aa23.28■■□□□ 1.32
RPF1-202ENST00000370656 RIMS2Q9UQ26 1411 aa23.27■■□□□ 1.32
RPF1-202ENST00000370656 FAM50AQ14320 339 aaKnown RBP23.26■■□□□ 1.31
RPF1-202ENST00000370656 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
RPF1-202ENST00000370656 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.25■■□□□ 1.31
RPF1-202ENST00000370656 NCOA3Q9Y6Q9 1424 aa23.25■■□□□ 1.31
RPF1-202ENST00000370656 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
RPF1-202ENST00000370656 TBX22Q9Y458 520 aa23.24■■□□□ 1.31
RPF1-202ENST00000370656 CHGAP10645 457 aaKnown RBP23.21■■□□□ 1.31
RPF1-202ENST00000370656 COL16A1Q07092 1604 aaPredicted RBP23.2■■□□□ 1.3
RPF1-202ENST00000370656 DIP2AQ14689 1571 aa23.19■■□□□ 1.3
RPF1-202ENST00000370656 UNC13BO14795 1591 aa23.18■■□□□ 1.3
RPF1-202ENST00000370656 SPATA31A6Q5VVP1 1343 aa23.18■■□□□ 1.3
RPF1-202ENST00000370656 CADPS2Q86UW7 1296 aa23.18■■□□□ 1.3
RPF1-202ENST00000370656 ATF3P18847 181 aa23.17■■□□□ 1.3
RPF1-202ENST00000370656 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
RPF1-202ENST00000370656 PIK3R4Q99570 1358 aa23.16■■□□□ 1.3
RPF1-202ENST00000370656 MEX3CQ5U5Q3 659 aaKnown RBP23.16■■□□□ 1.3
RPF1-202ENST00000370656 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
RPF1-202ENST00000370656 E9PCH4 1651 aa23.16■■□□□ 1.3
RPF1-202ENST00000370656 LRP6O75581 1613 aa23.15■■□□□ 1.3
RPF1-202ENST00000370656 AHDC1Q5TGY3 1603 aaPredicted RBP23.13■■□□□ 1.29
RPF1-202ENST00000370656 ZNF772Q68DY9 489 aaPredicted RBP23.13■■□□□ 1.29
RPF1-202ENST00000370656 ADAMTS13Q76LX8 1427 aa23.13■■□□□ 1.29
RPF1-202ENST00000370656 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
RPF1-202ENST00000370656 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
RPF1-202ENST00000370656 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
RPF1-202ENST00000370656 TRPM2O94759 1503 aa23.12■■□□□ 1.29
RPF1-202ENST00000370656 IQGAP3Q86VI3 1631 aa23.11■■□□□ 1.29
RPF1-202ENST00000370656 UPF1Q92900 1129 aaKnown RBP eCLIP23.09■■□□□ 1.29
RPF1-202ENST00000370656 ROCK1Q13464 1354 aa23.07■■□□□ 1.28
RPF1-202ENST00000370656 AMOTL2Q9Y2J4 779 aa23.06■■□□□ 1.28
RPF1-202ENST00000370656 DCCP43146 1447 aa23.04■■□□□ 1.28
RPF1-202ENST00000370656 NUP155O75694 1391 aa23.03■■□□□ 1.28
RPF1-202ENST00000370656 BRINP3Q76B58 766 aa23.02■■□□□ 1.28
RPF1-202ENST00000370656 RXRBP28702 533 aa23■■□□□ 1.27
RPF1-202ENST00000370656 PTPRUQ92729 1446 aa22.99■■□□□ 1.27
RPF1-202ENST00000370656 NUTM2BA6NNL0 878 aaPredicted RBP22.99■■□□□ 1.27
RPF1-202ENST00000370656 NUTM2EB1AL46 878 aaPredicted RBP22.99■■□□□ 1.27
RPF1-202ENST00000370656 NUTM2AQ8IVF1 878 aaPredicted RBP22.99■■□□□ 1.27
RPF1-202ENST00000370656 XRN1Q8IZH2 1706 aaKnown RBP22.99■■□□□ 1.27
RPF1-202ENST00000370656 SETBP1Q9Y6X0 1596 aa22.98■■□□□ 1.27
RPF1-202ENST00000370656 SPHKAPQ2M3C7 1700 aa22.98■■□□□ 1.27
RPF1-202ENST00000370656 ASXL1Q8IXJ9 1541 aa22.98■■□□□ 1.27
RPF1-202ENST00000370656 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
RPF1-202ENST00000370656 NHSL1Q5SYE7 1610 aa22.96■■□□□ 1.27
RPF1-202ENST00000370656 NRXN3Q9Y4C0 1643 aa22.96■■□□□ 1.27
RPF1-202ENST00000370656 SETD5Q9C0A6 1442 aa22.95■■□□□ 1.26
RPF1-202ENST00000370656 CDK12Q9NYV4 1490 aaPredicted RBP22.95■■□□□ 1.26
RPF1-202ENST00000370656 LRRC59Q96AG4 307 aaKnown RBP22.94■■□□□ 1.26
RPF1-202ENST00000370656 MST1RQ04912 1400 aa22.93■■□□□ 1.26
RPF1-202ENST00000370656 ITGAEP38570 1179 aa22.93■■□□□ 1.26
RPF1-202ENST00000370656 AFF2P51816 1311 aa22.92■■□□□ 1.26
RPF1-202ENST00000370656 ADGRL3Q9HAR2 1447 aa22.89■■□□□ 1.25
RPF1-202ENST00000370656 METP08581 1390 aa22.89■■□□□ 1.25
RPF1-202ENST00000370656 C8orf37Q96NL8 207 aa22.86■■□□□ 1.25
RPF1-202ENST00000370656 KIF1BO60333 1816 aa22.86■■□□□ 1.25
RPF1-202ENST00000370656 NALCNQ8IZF0 1738 aa22.85■■□□□ 1.25
RPF1-202ENST00000370656 RGS12O14924 1447 aa22.85■■□□□ 1.25
RPF1-202ENST00000370656 RBM6P78332 1123 aaKnown RBP22.84■■□□□ 1.25
RPF1-202ENST00000370656 NEXMIFQ5QGS0 1516 aa22.83■■□□□ 1.25
RPF1-202ENST00000370656 QTRT2Q9H974 415 aaKnown RBP22.83■■□□□ 1.25
RPF1-202ENST00000370656 PNPLA6Q8IY17 1366 aa22.83■■□□□ 1.25
RPF1-202ENST00000370656 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
RPF1-202ENST00000370656 DDX17Q92841 729 aaKnown RBP22.8■■□□□ 1.24
RPF1-202ENST00000370656 NGLY1Q96IV0 654 aa22.79■■□□□ 1.24
RPF1-202ENST00000370656 C1orf167Q5SNV9 1468 aa22.79■■□□□ 1.24
RPF1-202ENST00000370656 LAMC1P11047 1609 aa22.77■■□□□ 1.24
RPF1-202ENST00000370656 PTCH1Q13635 1447 aa22.76■■□□□ 1.23
RPF1-202ENST00000370656 VGFO15240 615 aaPredicted RBP22.76■■□□□ 1.23
RPF1-202ENST00000370656 ADAMTS2O95450 1211 aa22.76■■□□□ 1.23
RPF1-202ENST00000370656 SOS2Q07890 1332 aaPredicted RBP22.72■■□□□ 1.23
RPF1-202ENST00000370656 ATAD2Q6PL18 1390 aa22.71■■□□□ 1.23
RPF1-202ENST00000370656 PPARGC1BQ86YN6 1023 aaKnown RBP22.7■■□□□ 1.22
RPF1-202ENST00000370656 ORAI2Q96SN7 254 aa22.7■■□□□ 1.22
RPF1-202ENST00000370656 USP21Q9UK80 565 aa22.7■■□□□ 1.22
RPF1-202ENST00000370656 ROBO2Q9HCK4 1378 aa22.69■■□□□ 1.22
RPF1-202ENST00000370656 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
RPF1-202ENST00000370656 TRPC5Q9UL62 973 aaPredicted RBP22.69■■□□□ 1.22
RPF1-202ENST00000370656 HFM1A2PYH4 1435 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms