RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 AMPHP49418 695 aa21■□□□□ 0.95
PTP4A1-201ENST00000370651 TRAK2O60296 914 aa20.99■□□□□ 0.95
PTP4A1-201ENST00000370651 RIPK4P57078 832 aa20.99■□□□□ 0.95
PTP4A1-201ENST00000370651 MCTP1Q6DN14 999 aa20.99■□□□□ 0.95
PTP4A1-201ENST00000370651 FAM184AQ8NB25 1140 aa20.98■□□□□ 0.95
PTP4A1-201ENST00000370651 ZNF330Q9Y3S2 320 aaPredicted RBP20.97■□□□□ 0.95
PTP4A1-201ENST00000370651 NASPP49321 788 aaPredicted RBP20.97■□□□□ 0.95
PTP4A1-201ENST00000370651 INTS3Q68E01 1043 aaKnown RBP20.97■□□□□ 0.95
PTP4A1-201ENST00000370651 DIAPH1O60610 1272 aaKnown RBP20.97■□□□□ 0.95
PTP4A1-201ENST00000370651 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
PTP4A1-201ENST00000370651 DIAPH3Q9NSV4 1193 aa20.97■□□□□ 0.95
PTP4A1-201ENST00000370651 TPM3P06753 285 aa20.96■□□□□ 0.95
PTP4A1-201ENST00000370651 ZNF771Q7L3S4 317 aaPredicted RBP20.96■□□□□ 0.95
PTP4A1-201ENST00000370651 NOC3LQ8WTT2 800 aaKnown RBP20.96■□□□□ 0.95
PTP4A1-201ENST00000370651 ZNF592Q92610 1267 aa20.95■□□□□ 0.94
PTP4A1-201ENST00000370651 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
PTP4A1-201ENST00000370651 NGDNQ8NEJ9 315 aaKnown RBP20.95■□□□□ 0.94
PTP4A1-201ENST00000370651 ANO2Q9NQ90 1003 aa20.95■□□□□ 0.94
PTP4A1-201ENST00000370651 CSB-PGBD3P0DP91 1061 aa20.94■□□□□ 0.94
PTP4A1-201ENST00000370651 TAF7LQ5H9L4 462 aa20.94■□□□□ 0.94
PTP4A1-201ENST00000370651 RUFY2Q8WXA3 655 aa20.94■□□□□ 0.94
PTP4A1-201ENST00000370651 ISY1Q9ULR0 285 aaKnown RBP20.94■□□□□ 0.94
PTP4A1-201ENST00000370651 VGFO15240 615 aaPredicted RBP20.94■□□□□ 0.94
PTP4A1-201ENST00000370651 COG3Q96JB2 828 aa20.93■□□□□ 0.94
PTP4A1-201ENST00000370651 ZKSCAN1P17029 563 aaPredicted RBP20.93■□□□□ 0.94
PTP4A1-201ENST00000370651 CHMP4CQ96CF2 233 aa20.93■□□□□ 0.94
PTP4A1-201ENST00000370651 ROCK1Q13464 1354 aa20.93■□□□□ 0.94
PTP4A1-201ENST00000370651 SMG6Q86US8 1419 aaKnown RBP20.93■□□□□ 0.94
PTP4A1-201ENST00000370651 ARAP1Q96P48 1450 aa20.92■□□□□ 0.94
PTP4A1-201ENST00000370651 R3HCC1Q9Y3T6 440 aaKnown RBP20.92■□□□□ 0.94
PTP4A1-201ENST00000370651 LTV1Q96GA3 475 aaPredicted RBP20.92■□□□□ 0.94
PTP4A1-201ENST00000370651 CREBRFQ8IUR6 639 aa20.92■□□□□ 0.94
PTP4A1-201ENST00000370651 PNISRQ8TF01 805 aaKnown RBP20.91■□□□□ 0.94
PTP4A1-201ENST00000370651 CDC45O75419 566 aa20.9■□□□□ 0.94
PTP4A1-201ENST00000370651 NCOA2Q15596 1464 aa20.9■□□□□ 0.94
PTP4A1-201ENST00000370651 RASSF8Q8NHQ8 419 aa20.9■□□□□ 0.94
PTP4A1-201ENST00000370651 CCAR2Q8N163 923 aaKnown RBP20.89■□□□□ 0.94
PTP4A1-201ENST00000370651 MAP7D2Q96T17 732 aa20.89■□□□□ 0.94
PTP4A1-201ENST00000370651 CASKIN1Q8WXD9 1431 aa20.89■□□□□ 0.93
PTP4A1-201ENST00000370651 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.93
PTP4A1-201ENST00000370651 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
PTP4A1-201ENST00000370651 PDE3AQ14432 1141 aa20.88■□□□□ 0.93
PTP4A1-201ENST00000370651 CCDC39Q9UFE4 941 aa20.88■□□□□ 0.93
PTP4A1-201ENST00000370651 CCDC184Q52MB2 194 aa20.88■□□□□ 0.93
PTP4A1-201ENST00000370651 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
PTP4A1-201ENST00000370651 MINK1Q8N4C8 1332 aaPredicted RBP20.88■□□□□ 0.93
PTP4A1-201ENST00000370651 NUTM2FA1L443 756 aa20.88■□□□□ 0.93
PTP4A1-201ENST00000370651 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
PTP4A1-201ENST00000370651 MTERF4Q7Z6M4 381 aaKnown RBP20.87■□□□□ 0.93
PTP4A1-201ENST00000370651 SMC3Q9UQE7 1217 aa20.87■□□□□ 0.93
PTP4A1-201ENST00000370651 FYCO1Q9BQS8 1478 aa20.87■□□□□ 0.93
PTP4A1-201ENST00000370651 BICD2Q8TD16 824 aa20.87■□□□□ 0.93
PTP4A1-201ENST00000370651 GNAI1P63096 354 aa20.87■□□□□ 0.93
PTP4A1-201ENST00000370651 MSH5O43196 834 aa20.86■□□□□ 0.93
PTP4A1-201ENST00000370651 CLSTN1O94985 981 aa20.86■□□□□ 0.93
PTP4A1-201ENST00000370651 TPM2P07951 284 aa20.86■□□□□ 0.93
PTP4A1-201ENST00000370651 VPS37CA5D8V6 355 aaPredicted RBP20.86■□□□□ 0.93
PTP4A1-201ENST00000370651 PPP2R1AP30153 589 aa20.86■□□□□ 0.93
PTP4A1-201ENST00000370651 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
PTP4A1-201ENST00000370651 GPS2Q13227 327 aa20.86■□□□□ 0.93
PTP4A1-201ENST00000370651 TOMM22Q9NS69 142 aa20.86■□□□□ 0.93
PTP4A1-201ENST00000370651 TCP11L2Q8N4U5 519 aa20.85■□□□□ 0.93
PTP4A1-201ENST00000370651 A0A0U1RQG5 324 aaPredicted RBP20.84■□□□□ 0.93
PTP4A1-201ENST00000370651 NBPF8Q3BBV2 869 aa20.84■□□□□ 0.93
PTP4A1-201ENST00000370651 RNF214Q8ND24 703 aa20.84■□□□□ 0.93
PTP4A1-201ENST00000370651 CAVIN1Q6NZI2 390 aaKnown RBP20.84■□□□□ 0.93
PTP4A1-201ENST00000370651 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.93
PTP4A1-201ENST00000370651 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
PTP4A1-201ENST00000370651 TPD52L1Q16890 204 aaPredicted RBP20.82■□□□□ 0.92
PTP4A1-201ENST00000370651 IFT57Q9NWB7 429 aa20.82■□□□□ 0.92
PTP4A1-201ENST00000370651 SASS6Q6UVJ0 657 aa20.81■□□□□ 0.92
PTP4A1-201ENST00000370651 MBD3O95983 291 aa20.81■□□□□ 0.92
PTP4A1-201ENST00000370651 CCDC173Q0VFZ6 552 aa20.81■□□□□ 0.92
PTP4A1-201ENST00000370651 HOMER1Q86YM7 354 aa20.81■□□□□ 0.92
PTP4A1-201ENST00000370651 IFIT2P09913 472 aaKnown RBP20.81■□□□□ 0.92
PTP4A1-201ENST00000370651 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
PTP4A1-201ENST00000370651 FKBP5Q13451 457 aaPredicted RBP20.81■□□□□ 0.92
PTP4A1-201ENST00000370651 TPM1P09493 284 aa20.8■□□□□ 0.92
PTP4A1-201ENST00000370651 TSR1Q2NL82 804 aaKnown RBP20.8■□□□□ 0.92
PTP4A1-201ENST00000370651 C9orf78Q9NZ63 289 aaPredicted RBP20.8■□□□□ 0.92
PTP4A1-201ENST00000370651 CCDC9Q9Y3X0 531 aaKnown RBP20.8■□□□□ 0.92
PTP4A1-201ENST00000370651 PES1O00541 588 aaKnown RBP20.8■□□□□ 0.92
PTP4A1-201ENST00000370651 BCAR3O75815 825 aa20.8■□□□□ 0.92
PTP4A1-201ENST00000370651 PTPRGP23470 1445 aa20.8■□□□□ 0.92
PTP4A1-201ENST00000370651 TEX35Q5T0J7 233 aa20.79■□□□□ 0.92
PTP4A1-201ENST00000370651 MTHFSP49914 203 aa20.79■□□□□ 0.92
PTP4A1-201ENST00000370651 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
PTP4A1-201ENST00000370651 TEFQ10587 303 aa20.79■□□□□ 0.92
PTP4A1-201ENST00000370651 EIF2S2P20042 333 aaKnown RBP20.78■□□□□ 0.92
PTP4A1-201ENST00000370651 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.78■□□□□ 0.92
PTP4A1-201ENST00000370651 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
PTP4A1-201ENST00000370651 RABEP1Q15276 862 aa20.77■□□□□ 0.92
PTP4A1-201ENST00000370651 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.92
PTP4A1-201ENST00000370651 NECTIN2Q92692 538 aa20.76■□□□□ 0.91
PTP4A1-201ENST00000370651 PRPF40AO75400 957 aaKnown RBP20.76■□□□□ 0.91
PTP4A1-201ENST00000370651 GGNBP2Q9H3C7 697 aa20.76■□□□□ 0.91
PTP4A1-201ENST00000370651 HFM1A2PYH4 1435 aa20.76■□□□□ 0.91
PTP4A1-201ENST00000370651 HMOX1P09601 288 aa20.75■□□□□ 0.91
PTP4A1-201ENST00000370651 NEXNQ0ZGT2 675 aa20.75■□□□□ 0.91
PTP4A1-201ENST00000370651 GRPEL1Q9HAV7 217 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms