RNA–Protein interactions for RNA: ENST00000369792.4

ALX3-201, Transcript of ALX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX3, Length 1,859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3-201ENST00000369792 NRXN1Q9ULB1 1477 aa28.91■■■□□ 2.22
ALX3-201ENST00000369792 ARHGEF40Q8TER5 1519 aa28.9■■■□□ 2.22
ALX3-201ENST00000369792 CFAP70Q5T0N1 1121 aa28.89■■■□□ 2.21
ALX3-201ENST00000369792 PPLO60437 1756 aa28.88■■■□□ 2.21
ALX3-201ENST00000369792 PREX1Q8TCU6 1659 aa28.87■■■□□ 2.21
ALX3-201ENST00000369792 SCAF11Q99590 1463 aaKnown RBP28.87■■■□□ 2.21
ALX3-201ENST00000369792 PPP6R1Q9UPN7 881 aa28.87■■■□□ 2.21
ALX3-201ENST00000369792 DISP3Q9P2K9 1392 aa28.86■■■□□ 2.21
ALX3-201ENST00000369792 IDI1Q13907 227 aa28.85■■■□□ 2.21
ALX3-201ENST00000369792 RPGRIP1LQ68CZ1 1315 aa28.85■■■□□ 2.21
ALX3-201ENST00000369792 FBXO31Q5XUX0 539 aaPredicted RBP28.82■■■□□ 2.2
ALX3-201ENST00000369792 SLC52A1Q9NWF4 448 aa28.82■■■□□ 2.2
ALX3-201ENST00000369792 CCDC184Q52MB2 194 aa28.81■■■□□ 2.2
ALX3-201ENST00000369792 CLTCQ00610 1675 aaKnown RBP28.79■■■□□ 2.2
ALX3-201ENST00000369792 TMF1P82094 1093 aa28.79■■■□□ 2.2
ALX3-201ENST00000369792 MLECQ14165 292 aa28.78■■■□□ 2.2
ALX3-201ENST00000369792 GTF3C3Q9Y5Q9 886 aa28.78■■■□□ 2.2
ALX3-201ENST00000369792 ERVK-7P63135 1459 aa28.77■■■□□ 2.2
ALX3-201ENST00000369792 PIK3C2GO75747 1445 aa28.77■■■□□ 2.2
ALX3-201ENST00000369792 NEXMIFQ5QGS0 1516 aa28.76■■■□□ 2.19
ALX3-201ENST00000369792 C14orf93Q9H972 538 aaKnown RBP28.75■■■□□ 2.19
ALX3-201ENST00000369792 TMEM131LA2VDJ0 1609 aa28.73■■■□□ 2.19
ALX3-201ENST00000369792 SETBP1Q9Y6X0 1596 aa28.73■■■□□ 2.19
ALX3-201ENST00000369792 MYO5BQ9ULV0 1848 aa28.72■■■□□ 2.19
ALX3-201ENST00000369792 EIF3AQ14152 1382 aaKnown RBP28.72■■■□□ 2.19
ALX3-201ENST00000369792 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.19
ALX3-201ENST00000369792 CNGB1Q14028 1251 aaPredicted RBP28.7■■■□□ 2.18
ALX3-201ENST00000369792 VGFO15240 615 aaPredicted RBP28.69■■■□□ 2.18
ALX3-201ENST00000369792 PER1O15534 1290 aaPredicted RBP28.68■■■□□ 2.18
ALX3-201ENST00000369792 ADGRB1O14514 1584 aa28.67■■■□□ 2.18
ALX3-201ENST00000369792 MRS2Q9HD23 443 aa28.67■■■□□ 2.18
ALX3-201ENST00000369792 SPATA31D1Q6ZQQ2 1576 aa28.66■■■□□ 2.18
ALX3-201ENST00000369792 ZFYVE9O95405 1425 aa28.66■■■□□ 2.18
ALX3-201ENST00000369792 TMEM132EQ6IEE7 984 aa28.63■■■□□ 2.17
ALX3-201ENST00000369792 PANK3Q9H999 370 aa28.63■■■□□ 2.17
ALX3-201ENST00000369792 MYO3AQ8NEV4 1616 aa28.62■■■□□ 2.17
ALX3-201ENST00000369792 ZMYM3Q14202 1370 aa28.61■■■□□ 2.17
ALX3-201ENST00000369792 SLC24A1O60721 1099 aa28.6■■■□□ 2.17
ALX3-201ENST00000369792 TRHP20396 242 aaPredicted RBP28.6■■■□□ 2.17
ALX3-201ENST00000369792 CDCA8Q53HL2 280 aa28.6■■■□□ 2.17
ALX3-201ENST00000369792 TRAK1Q9UPV9 953 aa28.59■■■□□ 2.17
ALX3-201ENST00000369792 KTN1Q86UP2 1357 aaKnown RBP28.58■■■□□ 2.17
ALX3-201ENST00000369792 ESF1Q9H501 851 aaKnown RBP28.57■■■□□ 2.16
ALX3-201ENST00000369792 RALBP1Q15311 655 aa28.57■■■□□ 2.16
ALX3-201ENST00000369792 CENPJQ9HC77 1338 aaPredicted RBP28.55■■■□□ 2.16
ALX3-201ENST00000369792 FAM9BQ8IZU0 186 aa28.55■■■□□ 2.16
ALX3-201ENST00000369792 SBNO2Q9Y2G9 1366 aa28.54■■■□□ 2.16
ALX3-201ENST00000369792 STAG3Q9UJ98 1225 aa28.54■■■□□ 2.16
ALX3-201ENST00000369792 A2ML1A8K2U0 1454 aa28.54■■■□□ 2.16
ALX3-201ENST00000369792 HNRNPUQ00839 825 aaKnown RBP eCLIP28.53■■■□□ 2.16
ALX3-201ENST00000369792 KDM5AP29375 1690 aaKnown RBP28.53■■■□□ 2.16
ALX3-201ENST00000369792 MYOM1P52179 1685 aa28.52■■■□□ 2.16
ALX3-201ENST00000369792 PARD3Q8TEW0 1356 aa28.52■■■□□ 2.16
ALX3-201ENST00000369792 MYBBP1AQ9BQG0 1328 aaKnown RBP28.51■■■□□ 2.15
ALX3-201ENST00000369792 ASXL1Q8IXJ9 1541 aa28.49■■■□□ 2.15
ALX3-201ENST00000369792 SENP3Q9H4L4 574 aaPredicted RBP28.49■■■□□ 2.15
ALX3-201ENST00000369792 QRICH2Q9H0J4 1663 aa28.48■■■□□ 2.15
ALX3-201ENST00000369792 ARHGEF28Q8N1W1 1705 aaKnown RBP28.46■■■□□ 2.15
ALX3-201ENST00000369792 CC2D1BQ5T0F9 858 aaKnown RBP28.45■■■□□ 2.15
ALX3-201ENST00000369792 BRD4O60885 1362 aaPredicted RBP28.44■■■□□ 2.14
ALX3-201ENST00000369792 RIMS2Q9UQ26 1411 aa28.44■■■□□ 2.14
ALX3-201ENST00000369792 TMC1Q8TDI8 760 aa28.44■■■□□ 2.14
ALX3-201ENST00000369792 PNISRQ8TF01 805 aaKnown RBP28.44■■■□□ 2.14
ALX3-201ENST00000369792 ALKQ9UM73 1620 aa28.43■■■□□ 2.14
ALX3-201ENST00000369792 TNRQ92752 1358 aa28.43■■■□□ 2.14
ALX3-201ENST00000369792 KNSTRNQ9Y448 316 aa28.4■■■□□ 2.14
ALX3-201ENST00000369792 AMER1Q5JTC6 1135 aaPredicted RBP28.39■■■□□ 2.14
ALX3-201ENST00000369792 STK26Q9P289 416 aa28.39■■■□□ 2.14
ALX3-201ENST00000369792 NLRP13Q86W25 1043 aa28.38■■■□□ 2.13
ALX3-201ENST00000369792 DNAJC5Q9H3Z4 198 aa28.38■■■□□ 2.13
ALX3-201ENST00000369792 YTHDC2Q9H6S0 1430 aaKnown RBP28.36■■■□□ 2.13
ALX3-201ENST00000369792 PTPRMP28827 1452 aa28.34■■■□□ 2.13
ALX3-201ENST00000369792 CEBPAP49715 358 aaPredicted RBP28.34■■■□□ 2.13
ALX3-201ENST00000369792 CARD14Q9BXL6 1004 aa28.33■■■□□ 2.13
ALX3-201ENST00000369792 LRPPRCP42704 1394 aaKnown RBP28.32■■■□□ 2.12
ALX3-201ENST00000369792 TULP4Q9NRJ4 1543 aa28.32■■■□□ 2.12
ALX3-201ENST00000369792 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.31■■■□□ 2.12
ALX3-201ENST00000369792 SETD1AO15047 1707 aaKnown RBP28.31■■■□□ 2.12
ALX3-201ENST00000369792 NPC1L1Q9UHC9 1359 aa28.31■■■□□ 2.12
ALX3-201ENST00000369792 UBR1Q8IWV7 1749 aa28.3■■■□□ 2.12
ALX3-201ENST00000369792 PUS7Q96PZ0 661 aaKnown RBP28.3■■■□□ 2.12
ALX3-201ENST00000369792 SAFB2Q14151 953 aaKnown RBP eCLIP28.29■■■□□ 2.12
ALX3-201ENST00000369792 ZBED9Q6R2W3 1325 aa28.29■■■□□ 2.12
ALX3-201ENST00000369792 EVC2Q86UK5 1308 aa28.29■■■□□ 2.12
ALX3-201ENST00000369792 C3P01024 1663 aa28.29■■■□□ 2.12
ALX3-201ENST00000369792 NRXN3Q9Y4C0 1643 aa28.28■■■□□ 2.12
ALX3-201ENST00000369792 SLC12A5Q9H2X9 1139 aa28.27■■■□□ 2.12
ALX3-201ENST00000369792 PRAM1Q96QH2 718 aa28.27■■■□□ 2.12
ALX3-201ENST00000369792 FER1L4A9Z1Z3 1794 aa28.27■■■□□ 2.12
ALX3-201ENST00000369792 TMEM2Q9UHN6 1383 aa28.25■■■□□ 2.11
ALX3-201ENST00000369792 PPP2R1AP30153 589 aa28.24■■■□□ 2.11
ALX3-201ENST00000369792 NLRP1Q9C000 1473 aa28.24■■■□□ 2.11
ALX3-201ENST00000369792 HDGFP51858 240 aaKnown RBP28.23■■■□□ 2.11
ALX3-201ENST00000369792 CABP2Q9NPB3 220 aa28.23■■■□□ 2.11
ALX3-201ENST00000369792 POGKQ9P215 609 aa28.23■■■□□ 2.11
ALX3-201ENST00000369792 DLC1Q96QB1 1528 aa28.2■■■□□ 2.11
ALX3-201ENST00000369792 MINK1Q8N4C8 1332 aaPredicted RBP28.2■■■□□ 2.11
ALX3-201ENST00000369792 METP08581 1390 aa28.19■■■□□ 2.1
ALX3-201ENST00000369792 ABCC11Q96J66 1382 aa28.18■■■□□ 2.1
ALX3-201ENST00000369792 PLPPR3Q6T4P5 718 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms