RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 NRXN1Q9ULB1 1477 aa10.96□□□□□ -0.65
MUC1-209ENST00000368396 IQGAP1P46940 1657 aa10.95□□□□□ -0.66
MUC1-209ENST00000368396 PIK3C2BO00750 1634 aa10.95□□□□□ -0.66
MUC1-209ENST00000368396 PRKRIP1Q9H875 184 aaPredicted RBP10.95□□□□□ -0.66
MUC1-209ENST00000368396 SIGLEC1Q9BZZ2 1709 aa10.95□□□□□ -0.66
MUC1-209ENST00000368396 COL17A1Q9UMD9 1497 aaPredicted RBP10.94□□□□□ -0.66
MUC1-209ENST00000368396 TESK2Q96S53 571 aa10.94□□□□□ -0.66
MUC1-209ENST00000368396 SYNMO15061 1565 aa10.94□□□□□ -0.66
MUC1-209ENST00000368396 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
MUC1-209ENST00000368396 RPGRIP1LQ68CZ1 1315 aa10.93□□□□□ -0.66
MUC1-209ENST00000368396 ARHGEF40Q8TER5 1519 aa10.93□□□□□ -0.66
MUC1-209ENST00000368396 ADGRF5Q8IZF2 1346 aa10.91□□□□□ -0.66
MUC1-209ENST00000368396 PPLO60437 1756 aa10.91□□□□□ -0.66
MUC1-209ENST00000368396 POLR3GLQ9BT43 218 aa10.9□□□□□ -0.66
MUC1-209ENST00000368396 GTF3C3Q9Y5Q9 886 aa10.9□□□□□ -0.66
MUC1-209ENST00000368396 CFAP65Q6ZU64 1925 aaKnown RBP10.9□□□□□ -0.67
MUC1-209ENST00000368396 DISP3Q9P2K9 1392 aa10.9□□□□□ -0.67
MUC1-209ENST00000368396 PREX1Q8TCU6 1659 aa10.89□□□□□ -0.67
MUC1-209ENST00000368396 TMF1P82094 1093 aa10.89□□□□□ -0.67
MUC1-209ENST00000368396 SLC52A1Q9NWF4 448 aa10.89□□□□□ -0.67
MUC1-209ENST00000368396 SETBP1Q9Y6X0 1596 aa10.89□□□□□ -0.67
MUC1-209ENST00000368396 EIF3AQ14152 1382 aaKnown RBP10.89□□□□□ -0.67
MUC1-209ENST00000368396 PIK3C2GO75747 1445 aa10.88□□□□□ -0.67
MUC1-209ENST00000368396 CHGAP10645 457 aaKnown RBP10.88□□□□□ -0.67
MUC1-209ENST00000368396 CFAP70Q5T0N1 1121 aa10.88□□□□□ -0.67
MUC1-209ENST00000368396 KTN1Q86UP2 1357 aaKnown RBP10.88□□□□□ -0.67
MUC1-209ENST00000368396 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
MUC1-209ENST00000368396 NEXMIFQ5QGS0 1516 aa10.87□□□□□ -0.67
MUC1-209ENST00000368396 ZFYVE9O95405 1425 aa10.86□□□□□ -0.67
MUC1-209ENST00000368396 IDI1Q13907 227 aa10.86□□□□□ -0.67
MUC1-209ENST00000368396 CCDC184Q52MB2 194 aa10.86□□□□□ -0.67
MUC1-209ENST00000368396 C14orf93Q9H972 538 aaKnown RBP10.86□□□□□ -0.67
MUC1-209ENST00000368396 MYO3AQ8NEV4 1616 aa10.86□□□□□ -0.67
MUC1-209ENST00000368396 TMEM131LA2VDJ0 1609 aa10.85□□□□□ -0.67
MUC1-209ENST00000368396 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
MUC1-209ENST00000368396 CDCA8Q53HL2 280 aa10.85□□□□□ -0.67
MUC1-209ENST00000368396 ADGRB1O14514 1584 aa10.85□□□□□ -0.67
MUC1-209ENST00000368396 CLTCQ00610 1675 aaKnown RBP10.85□□□□□ -0.67
MUC1-209ENST00000368396 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
MUC1-209ENST00000368396 RALBP1Q15311 655 aa10.84□□□□□ -0.67
MUC1-209ENST00000368396 MRS2Q9HD23 443 aa10.84□□□□□ -0.67
MUC1-209ENST00000368396 SPATA31D1Q6ZQQ2 1576 aa10.84□□□□□ -0.67
MUC1-209ENST00000368396 SBNO2Q9Y2G9 1366 aa10.83□□□□□ -0.68
MUC1-209ENST00000368396 PER1O15534 1290 aaPredicted RBP10.83□□□□□ -0.68
MUC1-209ENST00000368396 PARD3Q8TEW0 1356 aa10.81□□□□□ -0.68
MUC1-209ENST00000368396 FBXO31Q5XUX0 539 aaPredicted RBP10.81□□□□□ -0.68
MUC1-209ENST00000368396 PANK3Q9H999 370 aa10.81□□□□□ -0.68
MUC1-209ENST00000368396 MYO5BQ9ULV0 1848 aa10.81□□□□□ -0.68
MUC1-209ENST00000368396 MYBBP1AQ9BQG0 1328 aaKnown RBP10.81□□□□□ -0.68
MUC1-209ENST00000368396 KDM5AP29375 1690 aaKnown RBP10.8□□□□□ -0.68
MUC1-209ENST00000368396 BRD4O60885 1362 aaPredicted RBP10.79□□□□□ -0.68
MUC1-209ENST00000368396 HNRNPUQ00839 825 aaKnown RBP eCLIP10.79□□□□□ -0.68
MUC1-209ENST00000368396 NCBP3Q53F19 620 aaKnown RBP10.79□□□□□ -0.68
MUC1-209ENST00000368396 CENPJQ9HC77 1338 aaPredicted RBP10.79□□□□□ -0.68
MUC1-209ENST00000368396 MYOM1P52179 1685 aa10.79□□□□□ -0.68
MUC1-209ENST00000368396 MLECQ14165 292 aa10.78□□□□□ -0.68
MUC1-209ENST00000368396 ZMYM3Q14202 1370 aa10.77□□□□□ -0.68
MUC1-209ENST00000368396 A2ML1A8K2U0 1454 aa10.77□□□□□ -0.69
MUC1-209ENST00000368396 QRICH2Q9H0J4 1663 aa10.76□□□□□ -0.69
MUC1-209ENST00000368396 ASXL1Q8IXJ9 1541 aa10.76□□□□□ -0.69
MUC1-209ENST00000368396 NUTM2DQ5VT03 806 aaPredicted RBP10.76□□□□□ -0.69
MUC1-209ENST00000368396 TMEM132EQ6IEE7 984 aa10.76□□□□□ -0.69
MUC1-209ENST00000368396 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
MUC1-209ENST00000368396 PNISRQ8TF01 805 aaKnown RBP10.76□□□□□ -0.69
MUC1-209ENST00000368396 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
MUC1-209ENST00000368396 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
MUC1-209ENST00000368396 ARHGEF28Q8N1W1 1705 aaKnown RBP10.75□□□□□ -0.69
MUC1-209ENST00000368396 NLRP13Q86W25 1043 aa10.75□□□□□ -0.69
MUC1-209ENST00000368396 TMC1Q8TDI8 760 aa10.75□□□□□ -0.69
MUC1-209ENST00000368396 PUS7Q96PZ0 661 aaKnown RBP10.75□□□□□ -0.69
MUC1-209ENST00000368396 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
MUC1-209ENST00000368396 TRAK1Q9UPV9 953 aa10.75□□□□□ -0.69
MUC1-209ENST00000368396 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
MUC1-209ENST00000368396 LRPPRCP42704 1394 aaKnown RBP10.75□□□□□ -0.69
MUC1-209ENST00000368396 CNGB1Q14028 1251 aaPredicted RBP10.74□□□□□ -0.69
MUC1-209ENST00000368396 RIMS2Q9UQ26 1411 aa10.74□□□□□ -0.69
MUC1-209ENST00000368396 ALKQ9UM73 1620 aa10.73□□□□□ -0.69
MUC1-209ENST00000368396 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
MUC1-209ENST00000368396 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
MUC1-209ENST00000368396 KNSTRNQ9Y448 316 aa10.73□□□□□ -0.69
MUC1-209ENST00000368396 TNRQ92752 1358 aa10.73□□□□□ -0.69
MUC1-209ENST00000368396 CC2D1BQ5T0F9 858 aaKnown RBP10.72□□□□□ -0.69
MUC1-209ENST00000368396 INSRP06213 1382 aa10.72□□□□□ -0.69
MUC1-209ENST00000368396 PTPRMP28827 1452 aa10.71□□□□□ -0.69
MUC1-209ENST00000368396 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.69
MUC1-209ENST00000368396 TULP4Q9NRJ4 1543 aa10.7□□□□□ -0.7
MUC1-209ENST00000368396 EVC2Q86UK5 1308 aa10.7□□□□□ -0.7
MUC1-209ENST00000368396 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
MUC1-209ENST00000368396 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.7□□□□□ -0.7
MUC1-209ENST00000368396 SETD1AO15047 1707 aaKnown RBP10.7□□□□□ -0.7
MUC1-209ENST00000368396 DLC1Q96QB1 1528 aa10.69□□□□□ -0.7
MUC1-209ENST00000368396 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
MUC1-209ENST00000368396 DMRT2Q9Y5R5 561 aa10.69□□□□□ -0.7
MUC1-209ENST00000368396 TRHP20396 242 aaPredicted RBP10.68□□□□□ -0.7
MUC1-209ENST00000368396 CARD14Q9BXL6 1004 aa10.68□□□□□ -0.7
MUC1-209ENST00000368396 NLRP1Q9C000 1473 aa10.68□□□□□ -0.7
MUC1-209ENST00000368396 UBR1Q8IWV7 1749 aa10.67□□□□□ -0.7
MUC1-209ENST00000368396 USP32Q8NFA0 1604 aa10.67□□□□□ -0.7
MUC1-209ENST00000368396 NRXN3Q9Y4C0 1643 aa10.67□□□□□ -0.7
MUC1-209ENST00000368396 PPP2R1AP30153 589 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms