RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CFAP70Q5T0N1 1121 aa16.53■□□□□ 0.24
PTPRK-204ENST00000368210 DAPK1P53355 1430 aa16.53■□□□□ 0.24
PTPRK-204ENST00000368210 NAIPQ13075 1403 aa16.53■□□□□ 0.24
PTPRK-204ENST00000368210 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.24
PTPRK-204ENST00000368210 KIAA0586Q9BVV6 1533 aa16.52■□□□□ 0.24
PTPRK-204ENST00000368210 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
PTPRK-204ENST00000368210 EPRSP07814 1512 aaKnown RBP16.51■□□□□ 0.23
PTPRK-204ENST00000368210 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
PTPRK-204ENST00000368210 FAM161AQ3B820 660 aa16.51■□□□□ 0.23
PTPRK-204ENST00000368210 TMEM132EQ6IEE7 984 aa16.51■□□□□ 0.23
PTPRK-204ENST00000368210 IL27Q8NEV9 243 aa16.51■□□□□ 0.23
PTPRK-204ENST00000368210 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
PTPRK-204ENST00000368210 SUPT6HQ7KZ85 1726 aaKnown RBP16.51■□□□□ 0.23
PTPRK-204ENST00000368210 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
PTPRK-204ENST00000368210 CDK13Q14004 1512 aaKnown RBP16.49■□□□□ 0.23
PTPRK-204ENST00000368210 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
PTPRK-204ENST00000368210 MAP7D2Q96T17 732 aa16.49■□□□□ 0.23
PTPRK-204ENST00000368210 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
PTPRK-204ENST00000368210 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
PTPRK-204ENST00000368210 RIPK4P57078 832 aa16.48■□□□□ 0.23
PTPRK-204ENST00000368210 PCF11O94913 1555 aaKnown RBP16.48■□□□□ 0.23
PTPRK-204ENST00000368210 ZNF330Q9Y3S2 320 aaPredicted RBP16.47■□□□□ 0.23
PTPRK-204ENST00000368210 TRIM6-TRIM34B2RNG4 842 aa16.47■□□□□ 0.23
PTPRK-204ENST00000368210 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
PTPRK-204ENST00000368210 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTPRK-204ENST00000368210 GZF1Q9H116 711 aaPredicted RBP16.46■□□□□ 0.23
PTPRK-204ENST00000368210 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
PTPRK-204ENST00000368210 GGNBP2Q9H3C7 697 aa16.45■□□□□ 0.22
PTPRK-204ENST00000368210 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
PTPRK-204ENST00000368210 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
PTPRK-204ENST00000368210 CABP2Q9NPB3 220 aa16.45■□□□□ 0.22
PTPRK-204ENST00000368210 RRP9O43818 475 aaKnown RBP16.45■□□□□ 0.22
PTPRK-204ENST00000368210 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
PTPRK-204ENST00000368210 IQGAP2Q13576 1575 aa16.45■□□□□ 0.22
PTPRK-204ENST00000368210 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
PTPRK-204ENST00000368210 DDX19BQ9UMR2 479 aa16.44■□□□□ 0.22
PTPRK-204ENST00000368210 DZIP1LQ8IYY4 767 aaKnown RBP16.44■□□□□ 0.22
PTPRK-204ENST00000368210 FAM43AQ8N2R8 423 aa16.44■□□□□ 0.22
PTPRK-204ENST00000368210 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
PTPRK-204ENST00000368210 MTERF4Q7Z6M4 381 aaKnown RBP16.43■□□□□ 0.22
PTPRK-204ENST00000368210 SCAPERQ9BY12 1400 aa16.43■□□□□ 0.22
PTPRK-204ENST00000368210 MTHFSP49914 203 aa16.43■□□□□ 0.22
PTPRK-204ENST00000368210 GPATCH3Q96I76 525 aa16.43■□□□□ 0.22
PTPRK-204ENST00000368210 CUL7Q14999 1698 aa16.42■□□□□ 0.22
PTPRK-204ENST00000368210 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
PTPRK-204ENST00000368210 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
PTPRK-204ENST00000368210 NRDCO43847 1150 aa16.4■□□□□ 0.22
PTPRK-204ENST00000368210 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
PTPRK-204ENST00000368210 APPP05067 770 aa16.4■□□□□ 0.22
PTPRK-204ENST00000368210 SLC4A3P48751 1232 aa16.39■□□□□ 0.21
PTPRK-204ENST00000368210 PDE4CQ08493 712 aa16.39■□□□□ 0.21
PTPRK-204ENST00000368210 GOLGA6L6A8MZA4 724 aa16.39■□□□□ 0.21
PTPRK-204ENST00000368210 TEFQ10587 303 aa16.39■□□□□ 0.21
PTPRK-204ENST00000368210 API5Q9BZZ5 524 aaKnown RBP16.39■□□□□ 0.21
PTPRK-204ENST00000368210 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
PTPRK-204ENST00000368210 FAM13BQ9NYF5 915 aa16.38■□□□□ 0.21
PTPRK-204ENST00000368210 HMOX1P09601 288 aa16.38■□□□□ 0.21
PTPRK-204ENST00000368210 CCDC184Q52MB2 194 aa16.37■□□□□ 0.21
PTPRK-204ENST00000368210 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
PTPRK-204ENST00000368210 ZNF771Q7L3S4 317 aaPredicted RBP16.37■□□□□ 0.21
PTPRK-204ENST00000368210 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
PTPRK-204ENST00000368210 TPM2P07951 284 aa16.37■□□□□ 0.21
PTPRK-204ENST00000368210 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
PTPRK-204ENST00000368210 ST18O60284 1047 aa16.37■□□□□ 0.21
PTPRK-204ENST00000368210 GNAI1P63096 354 aa16.37■□□□□ 0.21
PTPRK-204ENST00000368210 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
PTPRK-204ENST00000368210 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
PTPRK-204ENST00000368210 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
PTPRK-204ENST00000368210 ANKRD30BQ9BXX2 1392 aa16.36■□□□□ 0.21
PTPRK-204ENST00000368210 PLB1Q6P1J6 1458 aa16.36■□□□□ 0.21
PTPRK-204ENST00000368210 PANK1Q8TE04 598 aa16.35■□□□□ 0.21
PTPRK-204ENST00000368210 ABCC5O15440 1437 aa16.35■□□□□ 0.21
PTPRK-204ENST00000368210 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
PTPRK-204ENST00000368210 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-204ENST00000368210 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-204ENST00000368210 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
PTPRK-204ENST00000368210 BRPF3Q9ULD4 1205 aa16.35■□□□□ 0.21
PTPRK-204ENST00000368210 PTPN23Q9H3S7 1636 aa16.34■□□□□ 0.21
PTPRK-204ENST00000368210 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
PTPRK-204ENST00000368210 NOL8Q76FK4 1167 aaKnown RBP16.34■□□□□ 0.21
PTPRK-204ENST00000368210 AAMPQ13685 434 aa16.33■□□□□ 0.21
PTPRK-204ENST00000368210 ERBINQ96RT1 1412 aa16.33■□□□□ 0.2
PTPRK-204ENST00000368210 PRAM1Q96QH2 718 aa16.33■□□□□ 0.2
PTPRK-204ENST00000368210 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
PTPRK-204ENST00000368210 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
PTPRK-204ENST00000368210 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
PTPRK-204ENST00000368210 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
PTPRK-204ENST00000368210 CCDC141Q6ZP82 1450 aa16.32■□□□□ 0.2
PTPRK-204ENST00000368210 CAMSAP2Q08AD1 1489 aa16.32■□□□□ 0.2
PTPRK-204ENST00000368210 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
PTPRK-204ENST00000368210 PSME1Q06323 249 aa16.31■□□□□ 0.2
PTPRK-204ENST00000368210 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
PTPRK-204ENST00000368210 ZMYND15Q9H091 742 aa16.31■□□□□ 0.2
PTPRK-204ENST00000368210 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
PTPRK-204ENST00000368210 RAPGEF3O95398 923 aa16.3■□□□□ 0.2
PTPRK-204ENST00000368210 HTATSF1O43719 755 aaKnown RBP16.29■□□□□ 0.2
PTPRK-204ENST00000368210 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
PTPRK-204ENST00000368210 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-204ENST00000368210 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
PTPRK-204ENST00000368210 DRC7Q8IY82 874 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms