RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 MROH2BQ7Z745 1585 aa8.7□□□□□ -1.02
SPTA1-201ENST00000368147 CCDC70Q6NSX1 233 aa8.7□□□□□ -1.02
SPTA1-201ENST00000368147 NEXNQ0ZGT2 675 aa8.7□□□□□ -1.02
SPTA1-201ENST00000368147 TMEM132AQ24JP5 1023 aa8.7□□□□□ -1.02
SPTA1-201ENST00000368147 CCDC43Q96MW1 224 aaKnown RBP8.7□□□□□ -1.02
SPTA1-201ENST00000368147 RCAN3Q9UKA8 241 aa8.69□□□□□ -1.02
SPTA1-201ENST00000368147 RBM5P52756 815 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPTA1-201ENST00000368147 RWDD1Q9H446 243 aaPredicted RBP8.69□□□□□ -1.02
SPTA1-201ENST00000368147 CCDC18Q5T9S5 1454 aa8.69□□□□□ -1.02
SPTA1-201ENST00000368147 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
SPTA1-201ENST00000368147 NFXL1Q6ZNB6 911 aa8.69□□□□□ -1.02
SPTA1-201ENST00000368147 PANK3Q9H999 370 aa8.69□□□□□ -1.02
SPTA1-201ENST00000368147 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
SPTA1-201ENST00000368147 ATP2B2Q01814 1243 aa8.69□□□□□ -1.02
SPTA1-201ENST00000368147 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
SPTA1-201ENST00000368147 ABTB2Q8N961 1025 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 CHMP4CQ96CF2 233 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 PCMTD1Q96MG8 357 aaPredicted RBP8.68□□□□□ -1.02
SPTA1-201ENST00000368147 NOP58Q9Y2X3 529 aaKnown RBP8.68□□□□□ -1.02
SPTA1-201ENST00000368147 EVC2Q86UK5 1308 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 SYNE3Q6ZMZ3 975 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 FAM184AQ8NB25 1140 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 LMOD3Q0VAK6 560 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 SYAP1Q96A49 352 aaPredicted RBP8.68□□□□□ -1.02
SPTA1-201ENST00000368147 PTPRGP23470 1445 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 KIF16BQ96L93 1317 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
SPTA1-201ENST00000368147 TEX35Q5T0J7 233 aa8.68□□□□□ -1.02
SPTA1-201ENST00000368147 NEUROD6Q96NK8 337 aa8.67□□□□□ -1.02
SPTA1-201ENST00000368147 CABP2Q9NPB3 220 aa8.67□□□□□ -1.02
SPTA1-201ENST00000368147 CCDC191Q8NCU4 936 aa8.67□□□□□ -1.02
SPTA1-201ENST00000368147 BICDL1Q6ZP65 573 aa8.67□□□□□ -1.02
SPTA1-201ENST00000368147 TMEM132EQ6IEE7 984 aa8.66□□□□□ -1.02
SPTA1-201ENST00000368147 RAB3GAP2Q9H2M9 1393 aa8.66□□□□□ -1.02
SPTA1-201ENST00000368147 CHMP4BP1P59074 171 aa8.66□□□□□ -1.02
SPTA1-201ENST00000368147 VGFO15240 615 aaPredicted RBP8.66□□□□□ -1.02
SPTA1-201ENST00000368147 HSP90AA2PQ14568 343 aaPredicted RBP8.66□□□□□ -1.02
SPTA1-201ENST00000368147 FMN1Q68DA7 1419 aa8.66□□□□□ -1.02
SPTA1-201ENST00000368147 CCDC144AA2RUR9 1427 aa8.66□□□□□ -1.02
SPTA1-201ENST00000368147 FANCD2Q9BXW9 1451 aa8.66□□□□□ -1.02
SPTA1-201ENST00000368147 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.65□□□□□ -1.02
SPTA1-201ENST00000368147 CENPJQ9HC77 1338 aaPredicted RBP8.65□□□□□ -1.02
SPTA1-201ENST00000368147 KIF6Q6ZMV9 814 aa8.65□□□□□ -1.02
SPTA1-201ENST00000368147 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■■■■■ 94.2
SPTA1-201ENST00000368147 ARHGAP5Q13017 1502 aa8.65□□□□□ -1.02
SPTA1-201ENST00000368147 ANO2Q9NQ90 1003 aa8.65□□□□□ -1.02
SPTA1-201ENST00000368147 TSPYL4Q9UJ04 414 aa8.65□□□□□ -1.02
SPTA1-201ENST00000368147 ADAMTS2O95450 1211 aa8.64□□□□□ -1.03
SPTA1-201ENST00000368147 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
SPTA1-201ENST00000368147 BCL11BQ9C0K0 894 aaPredicted RBP8.64□□□□□ -1.03
SPTA1-201ENST00000368147 SPINK5Q9NQ38 1064 aaPredicted RBP8.64□□□□□ -1.03
SPTA1-201ENST00000368147 ZNF219Q9P2Y4 722 aaPredicted RBP8.64□□□□□ -1.03
SPTA1-201ENST00000368147 IFIT2P09913 472 aaKnown RBP8.64□□□□□ -1.03
SPTA1-201ENST00000368147 GRM1Q13255 1194 aa8.64□□□□□ -1.03
SPTA1-201ENST00000368147 CGNL1Q0VF96 1302 aa8.64□□□□□ -1.03
SPTA1-201ENST00000368147 TXNDC2Q86VQ3 553 aa8.64□□□□□ -1.03
SPTA1-201ENST00000368147 L3MBTL2Q969R5 705 aa8.64□□□□□ -1.03
SPTA1-201ENST00000368147 MAP7D2Q96T17 732 aa8.64□□□□□ -1.03
SPTA1-201ENST00000368147 TPM3P06753 285 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 ERICH2A1L162 156 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
SPTA1-201ENST00000368147 HDAC5Q9UQL6 1122 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 CDR1P51861 262 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
SPTA1-201ENST00000368147 SEPT11Q9NVA2 429 aaKnown RBP8.63□□□□□ -1.03
SPTA1-201ENST00000368147 NLRP6P59044 892 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 WASHC4Q2M389 1173 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 ST20-MTHFSA0A0A6YYL1 179 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 TRIM29Q14134 588 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 CHMP4AQ9BY43 222 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 RDXP35241 583 aaKnown RBP8.63□□□□□ -1.03
SPTA1-201ENST00000368147 DIAPH3Q9NSV4 1193 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 RALBP1Q15311 655 aa8.63□□□□□ -1.03
SPTA1-201ENST00000368147 RIPK4P57078 832 aa8.62□□□□□ -1.03
SPTA1-201ENST00000368147 CCAR2Q8N163 923 aaKnown RBP8.62□□□□□ -1.03
SPTA1-201ENST00000368147 DDX58O95786 925 aaKnown RBP8.62□□□□□ -1.03
SPTA1-201ENST00000368147 MYL6BP14649 208 aa8.62□□□□□ -1.03
SPTA1-201ENST00000368147 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
SPTA1-201ENST00000368147 PHF14O94880 888 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 G3BP1Q13283 466 aaKnown RBP eCLIP8.61□□□□□ -1.03
SPTA1-201ENST00000368147 DCTN1Q14203 1278 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 RAPGEF2Q9Y4G8 1499 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 PAF1Q8N7H5 531 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
SPTA1-201ENST00000368147 RSPH6AQ9H0K4 717 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 WWC3Q9ULE0 1092 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 TPM2P07951 284 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 GBP4Q96PP9 640 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 UACAQ9BZF9 1416 aa8.61□□□□□ -1.03
SPTA1-201ENST00000368147 DIAPH1O60610 1272 aaKnown RBP8.6□□□□□ -1.03
SPTA1-201ENST00000368147 CSPP1Q1MSJ5 1256 aa8.6□□□□□ -1.03
SPTA1-201ENST00000368147 RAD54L2Q9Y4B4 1467 aa8.6□□□□□ -1.03
SPTA1-201ENST00000368147 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
SPTA1-201ENST00000368147 AQRO60306 1485 aaKnown RBP eCLIP8.6□□□□□ -1.039e-7■■■■□ 23.6
SPTA1-201ENST00000368147 ZRSR2Q15696 482 aaKnown RBP8.6□□□□□ -1.03
SPTA1-201ENST00000368147 ZFYVE27Q5T4F4 411 aa8.6□□□□□ -1.03
SPTA1-201ENST00000368147 ZNF771Q7L3S4 317 aaPredicted RBP8.6□□□□□ -1.03
SPTA1-201ENST00000368147 TSR1Q2NL82 804 aaKnown RBP8.59□□□□□ -1.03
SPTA1-201ENST00000368147 CWC15Q9P013 229 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms