RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 SETD5Q9C0A6 1442 aa35.72■■■■□ 3.31
PFDN2-201ENST00000368010 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.71■■■■□ 3.31
PFDN2-201ENST00000368010 PLEKHG1Q9ULL1 1385 aa35.69■■■■□ 3.3
PFDN2-201ENST00000368010 ACIN1Q9UKV3 1341 aaKnown RBP35.69■■■■□ 3.3
PFDN2-201ENST00000368010 BCANQ96GW7 911 aa35.69■■■■□ 3.3
PFDN2-201ENST00000368010 CLTCL1P53675 1640 aa35.68■■■■□ 3.3
PFDN2-201ENST00000368010 SLC26A8Q96RN1 970 aa35.67■■■■□ 3.3
PFDN2-201ENST00000368010 STRCP1A6NGW2 1772 aa35.66■■■■□ 3.3
PFDN2-201ENST00000368010 UBAP1LF5GYI3 381 aa35.62■■■■□ 3.29
PFDN2-201ENST00000368010 LRRC7Q96NW7 1537 aa35.62■■■■□ 3.29
PFDN2-201ENST00000368010 NUTM2DQ5VT03 806 aaPredicted RBP35.61■■■■□ 3.29
PFDN2-201ENST00000368010 MPHOSPH9Q99550 1183 aa35.61■■■■□ 3.29
PFDN2-201ENST00000368010 ZNF326Q5BKZ1 582 aaKnown RBP35.6■■■■□ 3.29
PFDN2-201ENST00000368010 SENP3Q9H4L4 574 aaPredicted RBP35.6■■■■□ 3.29
PFDN2-201ENST00000368010 RAB3GAP2Q9H2M9 1393 aa35.59■■■■□ 3.29
PFDN2-201ENST00000368010 FOXD1Q16676 465 aa35.57■■■■□ 3.28
PFDN2-201ENST00000368010 KCNA6P17658 529 aa35.56■■■■□ 3.28
PFDN2-201ENST00000368010 KIF1BO60333 1816 aa35.55■■■■□ 3.28
PFDN2-201ENST00000368010 TBX22Q9Y458 520 aa35.52■■■■□ 3.28
PFDN2-201ENST00000368010 ADAMTS13Q76LX8 1427 aa35.5■■■■□ 3.27
PFDN2-201ENST00000368010 TOM1O60784 492 aa35.5■■■■□ 3.27
PFDN2-201ENST00000368010 DIP2AQ14689 1571 aa35.5■■■■□ 3.27
PFDN2-201ENST00000368010 NWD1Q149M9 1564 aa35.5■■■■□ 3.27
PFDN2-201ENST00000368010 NEXMIFQ5QGS0 1516 aa35.48■■■■□ 3.27
PFDN2-201ENST00000368010 CCDC144AA2RUR9 1427 aa35.48■■■■□ 3.27
PFDN2-201ENST00000368010 NKTRP30414 1462 aaKnown RBP35.47■■■■□ 3.27
PFDN2-201ENST00000368010 SETBP1Q9Y6X0 1596 aa35.42■■■■□ 3.26
PFDN2-201ENST00000368010 TMEM94Q12767 1356 aa35.41■■■■□ 3.26
PFDN2-201ENST00000368010 PIK3R4Q99570 1358 aa35.41■■■■□ 3.26
PFDN2-201ENST00000368010 PROSER2Q86WR7 435 aaPredicted RBP35.41■■■■□ 3.26
PFDN2-201ENST00000368010 CHD2O14647 1828 aaKnown RBP35.39■■■■□ 3.26
PFDN2-201ENST00000368010 SCAF1Q9H7N4 1312 aaKnown RBP35.39■■■■□ 3.26
PFDN2-201ENST00000368010 HRCP23327 699 aa35.39■■■■□ 3.26
PFDN2-201ENST00000368010 PIP4K2BP78356 416 aa35.39■■■■□ 3.26
PFDN2-201ENST00000368010 RPGRIP1LQ68CZ1 1315 aa35.38■■■■□ 3.25
PFDN2-201ENST00000368010 XIRP1Q702N8 1843 aaKnown RBP35.38■■■■□ 3.25
PFDN2-201ENST00000368010 NRXN3Q9Y4C0 1643 aa35.38■■■■□ 3.25
PFDN2-201ENST00000368010 ALKQ9UM73 1620 aa35.35■■■■□ 3.25
PFDN2-201ENST00000368010 VGFO15240 615 aaPredicted RBP35.35■■■■□ 3.25
PFDN2-201ENST00000368010 RBM33Q96EV2 1170 aaKnown RBP35.32■■■■□ 3.24
PFDN2-201ENST00000368010 SPATA31E1Q6ZUB1 1445 aa35.31■■■■□ 3.24
PFDN2-201ENST00000368010 PPLO60437 1756 aa35.28■■■■□ 3.24
PFDN2-201ENST00000368010 PTPRUQ92729 1446 aa35.27■■■■□ 3.24
PFDN2-201ENST00000368010 AMOTL2Q9Y2J4 779 aa35.27■■■■□ 3.24
PFDN2-201ENST00000368010 RGL3Q3MIN7 710 aa35.26■■■■□ 3.24
PFDN2-201ENST00000368010 METP08581 1390 aa35.25■■■■□ 3.23
PFDN2-201ENST00000368010 MSH6P52701 1360 aa35.25■■■■□ 3.23
PFDN2-201ENST00000368010 NCOA3Q9Y6Q9 1424 aa35.23■■■■□ 3.23
PFDN2-201ENST00000368010 XRN1Q8IZH2 1706 aaKnown RBP35.2■■■■□ 3.23
PFDN2-201ENST00000368010 ANKRD30BQ9BXX2 1392 aa35.2■■■■□ 3.23
PFDN2-201ENST00000368010 HSPA1LP34931 641 aa35.18■■■■□ 3.22
PFDN2-201ENST00000368010 C14orf37Q86TY3 774 aa35.18■■■■□ 3.22
PFDN2-201ENST00000368010 IFT172Q9UG01 1749 aa35.16■■■■□ 3.22
PFDN2-201ENST00000368010 ADGRF5Q8IZF2 1346 aa35.14■■■■□ 3.22
PFDN2-201ENST00000368010 SETD1AO15047 1707 aaKnown RBP35.14■■■■□ 3.22
PFDN2-201ENST00000368010 FAM135BQ49AJ0 1406 aa35.09■■■■□ 3.21
PFDN2-201ENST00000368010 C19orf44Q9H6X5 657 aa35.09■■■■□ 3.21
PFDN2-201ENST00000368010 PIK3C2GO75747 1445 aa35.06■■■■□ 3.2
PFDN2-201ENST00000368010 CADPS2Q86UW7 1296 aa35.04■■■■□ 3.2
PFDN2-201ENST00000368010 PTCH1Q13635 1447 aa35.04■■■■□ 3.2
PFDN2-201ENST00000368010 ATF3P18847 181 aa35.03■■■■□ 3.2
PFDN2-201ENST00000368010 SLAIN2Q9P270 581 aa35.03■■■■□ 3.2
PFDN2-201ENST00000368010 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.03■■■■□ 3.2
PFDN2-201ENST00000368010 MYOM2P54296 1465 aa35.03■■■■□ 3.2
PFDN2-201ENST00000368010 PRAG1Q86YV5 1406 aa35.02■■■■□ 3.2
PFDN2-201ENST00000368010 ROBO1Q9Y6N7 1651 aa35.01■■■■□ 3.19
PFDN2-201ENST00000368010 DCCP43146 1447 aa34.99■■■■□ 3.19
PFDN2-201ENST00000368010 ROBO2Q9HCK4 1378 aa34.98■■■■□ 3.19
PFDN2-201ENST00000368010 NRXN1Q9ULB1 1477 aa34.97■■■■□ 3.19
PFDN2-201ENST00000368010 ADGRL3Q9HAR2 1447 aa34.97■■■■□ 3.19
PFDN2-201ENST00000368010 ASXL1Q8IXJ9 1541 aa34.92■■■■□ 3.18
PFDN2-201ENST00000368010 LRPPRCP42704 1394 aaKnown RBP34.9■■■■□ 3.18
PFDN2-201ENST00000368010 DISP3Q9P2K9 1392 aa34.9■■■■□ 3.18
PFDN2-201ENST00000368010 NALCNQ8IZF0 1738 aa34.9■■■■□ 3.18
PFDN2-201ENST00000368010 C14orf93Q9H972 538 aaKnown RBP34.9■■■■□ 3.18
PFDN2-201ENST00000368010 LAMC1P11047 1609 aa34.9■■■■□ 3.18
PFDN2-201ENST00000368010 TMEM132EQ6IEE7 984 aa34.89■■■■□ 3.18
PFDN2-201ENST00000368010 STK26Q9P289 416 aa34.88■■■■□ 3.17
PFDN2-201ENST00000368010 TECPR2O15040 1411 aa34.88■■■■□ 3.17
PFDN2-201ENST00000368010 TRIM26Q12899 539 aaPredicted RBP34.87■■■■□ 3.17
PFDN2-201ENST00000368010 DCAF11Q8TEB1 546 aa34.87■■■■□ 3.17
PFDN2-201ENST00000368010 CFAP70Q5T0N1 1121 aa34.86■■■■□ 3.17
PFDN2-201ENST00000368010 STAC3Q96MF2 364 aa34.86■■■■□ 3.17
PFDN2-201ENST00000368010 ABCC11Q96J66 1382 aa34.86■■■■□ 3.17
PFDN2-201ENST00000368010 MST1RQ04912 1400 aa34.84■■■■□ 3.17
PFDN2-201ENST00000368010 YTHDC2Q9H6S0 1430 aaKnown RBP34.84■■■■□ 3.17
PFDN2-201ENST00000368010 KDM2AQ9Y2K7 1162 aa34.84■■■■□ 3.17
PFDN2-201ENST00000368010 DHX57Q6P158 1386 aaKnown RBP34.83■■■■□ 3.17
PFDN2-201ENST00000368010 KNDC1Q76NI1 1749 aa34.83■■■■□ 3.17
PFDN2-201ENST00000368010 MED1Q15648 1581 aaPredicted RBP34.79■■■■□ 3.16
PFDN2-201ENST00000368010 PHLPP1O60346 1717 aa34.78■■■■□ 3.16
PFDN2-201ENST00000368010 BRINP3Q76B58 766 aa34.78■■■■□ 3.16
PFDN2-201ENST00000368010 WAPLQ7Z5K2 1190 aa34.75■■■■□ 3.15
PFDN2-201ENST00000368010 AHDC1Q5TGY3 1603 aaPredicted RBP34.74■■■■□ 3.15
PFDN2-201ENST00000368010 CDC42BPGQ6DT37 1551 aa34.72■■■■□ 3.15
PFDN2-201ENST00000368010 SIRT1Q96EB6 747 aa34.72■■■■□ 3.15
PFDN2-201ENST00000368010 PLEKHH1Q9ULM0 1364 aa34.72■■■■□ 3.15
PFDN2-201ENST00000368010 ADGRB1O14514 1584 aa34.71■■■■□ 3.15
PFDN2-201ENST00000368010 COL16A1Q07092 1604 aaPredicted RBP34.71■■■■□ 3.15
PFDN2-201ENST00000368010 C1orf167Q5SNV9 1468 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms