RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 ATP10BO94823 1461 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 RGL3Q3MIN7 710 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 PIK3C2GO75747 1445 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 PRAG1Q86YV5 1406 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 ABCC10Q5T3U5 1492 aa9.27□□□□□ -0.93
VTA1-202ENST00000367630 MBD5Q9P267 1494 aa9.27□□□□□ -0.93
VTA1-202ENST00000367630 COL17A1Q9UMD9 1497 aaPredicted RBP9.27□□□□□ -0.93
VTA1-202ENST00000367630 NPM2Q86SE8 214 aaKnown RBP9.26□□□□□ -0.93
VTA1-202ENST00000367630 IQGAP3Q86VI3 1631 aa9.26□□□□□ -0.93
VTA1-202ENST00000367630 HSCBQ8IWL3 235 aa9.26□□□□□ -0.93
VTA1-202ENST00000367630 PNISRQ8TF01 805 aaKnown RBP9.26□□□□□ -0.93
VTA1-202ENST00000367630 ATAD2Q6PL18 1390 aa9.25□□□□□ -0.93
VTA1-202ENST00000367630 ASXL1Q8IXJ9 1541 aa9.25□□□□□ -0.93
VTA1-202ENST00000367630 NCLP19338 710 aaKnown RBP9.25□□□□□ -0.93
VTA1-202ENST00000367630 KDM5CP41229 1560 aa9.25□□□□□ -0.93
VTA1-202ENST00000367630 PARD3Q8TEW0 1356 aa9.25□□□□□ -0.93
VTA1-202ENST00000367630 SKOR2Q2VWA4 1001 aaPredicted RBP9.25□□□□□ -0.93
VTA1-202ENST00000367630 WDR63Q8IWG1 891 aa9.25□□□□□ -0.93
VTA1-202ENST00000367630 RUNDC1Q96C34 613 aa9.25□□□□□ -0.93
VTA1-202ENST00000367630 POGKQ9P215 609 aa9.25□□□□□ -0.93
VTA1-202ENST00000367630 MCCP23508 829 aa9.24□□□□□ -0.93
VTA1-202ENST00000367630 GBP4Q96PP9 640 aa9.24□□□□□ -0.93
VTA1-202ENST00000367630 SYNMO15061 1565 aa9.24□□□□□ -0.93
VTA1-202ENST00000367630 CC2D1BQ5T0F9 858 aaKnown RBP9.24□□□□□ -0.93
VTA1-202ENST00000367630 CHMP4CQ96CF2 233 aa9.24□□□□□ -0.93
VTA1-202ENST00000367630 PANK3Q9H999 370 aa9.24□□□□□ -0.93
VTA1-202ENST00000367630 B4GALNT3Q6L9W6 998 aa9.24□□□□□ -0.93
VTA1-202ENST00000367630 DDX11L8A8MPP1 907 aa9.23□□□□□ -0.93
VTA1-202ENST00000367630 SLC52A1Q9NWF4 448 aa9.23□□□□□ -0.93
VTA1-202ENST00000367630 CNGB1Q14028 1251 aaPredicted RBP9.23□□□□□ -0.93
VTA1-202ENST00000367630 ZNF518AQ6AHZ1 1483 aa9.22□□□□□ -0.93
VTA1-202ENST00000367630 ZNF608Q9ULD9 1512 aaPredicted RBP9.22□□□□□ -0.93
VTA1-202ENST00000367630 MYOM2P54296 1465 aa9.22□□□□□ -0.93
VTA1-202ENST00000367630 SPATA31E1Q6ZUB1 1445 aa9.22□□□□□ -0.93
VTA1-202ENST00000367630 MAGI3Q5TCQ9 1506 aa9.22□□□□□ -0.93
VTA1-202ENST00000367630 DDX19BQ9UMR2 479 aa9.22□□□□□ -0.93
VTA1-202ENST00000367630 KIF3BO15066 747 aa9.21□□□□□ -0.93
VTA1-202ENST00000367630 TRPM2O94759 1503 aa9.21□□□□□ -0.93
VTA1-202ENST00000367630 LRPPRCP42704 1394 aaKnown RBP9.21□□□□□ -0.93
VTA1-202ENST00000367630 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.93
VTA1-202ENST00000367630 SYCP2Q9BX26 1530 aa9.21□□□□□ -0.93
VTA1-202ENST00000367630 SBNO2Q9Y2G9 1366 aa9.21□□□□□ -0.94
VTA1-202ENST00000367630 HMMRO75330 724 aa9.21□□□□□ -0.94
VTA1-202ENST00000367630 KDM5AP29375 1690 aaKnown RBP9.2□□□□□ -0.94
VTA1-202ENST00000367630 FOXD1Q16676 465 aa9.2□□□□□ -0.94
VTA1-202ENST00000367630 NBPF8Q3BBV2 869 aa9.2□□□□□ -0.94
VTA1-202ENST00000367630 ADGRL1O94910 1474 aa9.2□□□□□ -0.94
VTA1-202ENST00000367630 PDE4AP27815 886 aa9.2□□□□□ -0.94
VTA1-202ENST00000367630 NKTRP30414 1462 aaKnown RBP9.2□□□□□ -0.94
VTA1-202ENST00000367630 BLMP54132 1417 aaPredicted RBP9.2□□□□□ -0.94
VTA1-202ENST00000367630 TTC37Q6PGP7 1564 aa9.2□□□□□ -0.94
VTA1-202ENST00000367630 ZKSCAN2Q63HK3 967 aa9.19□□□□□ -0.94
VTA1-202ENST00000367630 TET3O43151 1660 aa9.19□□□□□ -0.94
VTA1-202ENST00000367630 RNF123Q5XPI4 1314 aa9.19□□□□□ -0.94
VTA1-202ENST00000367630 KDM5BQ9UGL1 1544 aa9.19□□□□□ -0.94
VTA1-202ENST00000367630 KIAA1210Q9ULL0 1709 aa9.19□□□□□ -0.94
VTA1-202ENST00000367630 IRX6P78412 446 aaPredicted RBP9.19□□□□□ -0.94
VTA1-202ENST00000367630 CSPP1Q1MSJ5 1256 aa9.19□□□□□ -0.94
VTA1-202ENST00000367630 TRIM44Q96DX7 344 aaPredicted RBP9.19□□□□□ -0.94
VTA1-202ENST00000367630 IL16Q14005 1332 aa9.19□□□□□ -0.94
VTA1-202ENST00000367630 ZNF644Q9H582 1327 aaPredicted RBP9.18□□□□□ -0.94
VTA1-202ENST00000367630 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
VTA1-202ENST00000367630 PDIA4P13667 645 aaKnown RBP9.18□□□□□ -0.94
VTA1-202ENST00000367630 SYAP1Q96A49 352 aaPredicted RBP9.17□□□□□ -0.94
VTA1-202ENST00000367630 CDC42BPAQ5VT25 1732 aa9.17□□□□□ -0.94
VTA1-202ENST00000367630 API5Q9BZZ5 524 aaKnown RBP9.17□□□□□ -0.94
VTA1-202ENST00000367630 PPP2R1AP30153 589 aa9.17□□□□□ -0.94
VTA1-202ENST00000367630 DEKP35659 375 aaKnown RBP9.17□□□□□ -0.94
VTA1-202ENST00000367630 FANCAO15360 1455 aa9.17□□□□□ -0.94
VTA1-202ENST00000367630 ANKRD36BQ8N2N9 1353 aa9.17□□□□□ -0.94
VTA1-202ENST00000367630 ATP7AQ04656 1500 aa9.17□□□□□ -0.94
VTA1-202ENST00000367630 ZFYVE9O95405 1425 aa9.16□□□□□ -0.94
VTA1-202ENST00000367630 ABCC1P33527 1531 aa9.16□□□□□ -0.94
VTA1-202ENST00000367630 POLR3AO14802 1390 aaPredicted RBP9.16□□□□□ -0.94
VTA1-202ENST00000367630 NEO1Q92859 1461 aa9.16□□□□□ -0.94
VTA1-202ENST00000367630 CCDC27Q2M243 656 aa9.16□□□□□ -0.94
VTA1-202ENST00000367630 SAMD9LQ8IVG5 1584 aa9.15□□□□□ -0.95
VTA1-202ENST00000367630 MAGI2Q86UL8 1455 aa9.14□□□□□ -0.95
VTA1-202ENST00000367630 SRPK2P78362 688 aaKnown RBP9.14□□□□□ -0.95
VTA1-202ENST00000367630 HSP90AB1P08238 724 aaKnown RBP9.14□□□□□ -0.95
VTA1-202ENST00000367630 OSCARQ8IYS5 282 aa9.14□□□□□ -0.95
VTA1-202ENST00000367630 HTATSF1O43719 755 aaKnown RBP9.14□□□□□ -0.95
VTA1-202ENST00000367630 PHF14O94880 888 aa9.14□□□□□ -0.95
VTA1-202ENST00000367630 GNAI1P63096 354 aa9.14□□□□□ -0.95
VTA1-202ENST00000367630 WWC1Q8IX03 1113 aa9.13□□□□□ -0.95
VTA1-202ENST00000367630 TRPM1Q7Z4N2 1603 aa9.13□□□□□ -0.95
VTA1-202ENST00000367630 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
VTA1-202ENST00000367630 NBR1Q14596 966 aa9.13□□□□□ -0.95
VTA1-202ENST00000367630 DENND4BO75064 1496 aaPredicted RBP9.13□□□□□ -0.95
VTA1-202ENST00000367630 CLUAP1Q96AJ1 413 aa9.13□□□□□ -0.95
VTA1-202ENST00000367630 A2MP01023 1474 aa9.12□□□□□ -0.95
VTA1-202ENST00000367630 LRRIQ1Q96JM4 1722 aa9.12□□□□□ -0.95
VTA1-202ENST00000367630 GCC1Q96CN9 775 aa9.12□□□□□ -0.95
VTA1-202ENST00000367630 GOLGA6L6A8MZA4 724 aa9.12□□□□□ -0.95
VTA1-202ENST00000367630 LMTK2Q8IWU2 1503 aa9.12□□□□□ -0.95
VTA1-202ENST00000367630 SETBP1Q9Y6X0 1596 aa9.12□□□□□ -0.95
VTA1-202ENST00000367630 PTPRTO14522 1441 aa9.12□□□□□ -0.95
VTA1-202ENST00000367630 RSPH6AQ9H0K4 717 aa9.12□□□□□ -0.95
VTA1-202ENST00000367630 U2AF1L5P0DN76 240 aaPredicted RBP9.11□□□□□ -0.95
VTA1-202ENST00000367630 U2AF1Q01081 240 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms