RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 ANKRD45Q5TZF3 282 aa15.02□□□□□ -0.01
SHPRH-202ENST00000367503 TRIM6-TRIM34B2RNG4 842 aa15.01□□□□□ -0.01
SHPRH-202ENST00000367503 MCM4P33991 863 aa15.01□□□□□ -0.01
SHPRH-202ENST00000367503 BCL2L13Q9BXK5 485 aa15.01□□□□□ -0.01
SHPRH-202ENST00000367503 CAVIN1Q6NZI2 390 aaKnown RBP15.01□□□□□ -0.01
SHPRH-202ENST00000367503 ZSCAN30Q86W11 494 aa15□□□□□ -0.01
SHPRH-202ENST00000367503 RNF214Q8ND24 703 aa15□□□□□ -0.01
SHPRH-202ENST00000367503 IFT57Q9NWB7 429 aa15□□□□□ -0.01
SHPRH-202ENST00000367503 C11orf95C9JLR9 678 aaPredicted RBP15□□□□□ -0.01
SHPRH-202ENST00000367503 BRD4O60885 1362 aaPredicted RBP15□□□□□ -0.01
SHPRH-202ENST00000367503 GNL2Q13823 731 aaKnown RBP15□□□□□ -0.01
SHPRH-202ENST00000367503 GPATCH3Q96I76 525 aa15□□□□□ -0.01
SHPRH-202ENST00000367503 NOC3LQ8WTT2 800 aaKnown RBP14.99□□□□□ -0.01
SHPRH-202ENST00000367503 STAC3Q96MF2 364 aa14.99□□□□□ -0.01
SHPRH-202ENST00000367503 TRAK1Q9UPV9 953 aa14.99□□□□□ -0.01
SHPRH-202ENST00000367503 ARGLU1Q9NWB6 273 aaPredicted RBP14.99□□□□□ -0.01
SHPRH-202ENST00000367503 DDX19BQ9UMR2 479 aa14.99□□□□□ -0.01
SHPRH-202ENST00000367503 CUX1P39880 1505 aa14.99□□□□□ -0.01
SHPRH-202ENST00000367503 TPM3P06753 285 aa14.99□□□□□ -0.01
SHPRH-202ENST00000367503 MIA2Q96PC5 1412 aa14.99□□□□□ -0.01
SHPRH-202ENST00000367503 BECN2A8MW95 431 aa14.98□□□□□ -0.01
SHPRH-202ENST00000367503 CWC15Q9P013 229 aaKnown RBP14.98□□□□□ -0.01
SHPRH-202ENST00000367503 CCAR2Q8N163 923 aaKnown RBP14.98□□□□□ -0.01
SHPRH-202ENST00000367503 MLECQ14165 292 aa14.97□□□□□ -0.01
SHPRH-202ENST00000367503 PRDM10Q9NQV6 1147 aa14.97□□□□□ -0.01
SHPRH-202ENST00000367503 SLC4A10Q6U841 1118 aa14.96□□□□□ -0.01
SHPRH-202ENST00000367503 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.02
SHPRH-202ENST00000367503 DZIP1LQ8IYY4 767 aaKnown RBP14.95□□□□□ -0.02
SHPRH-202ENST00000367503 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
SHPRH-202ENST00000367503 REC8O95072 547 aa14.95□□□□□ -0.02
SHPRH-202ENST00000367503 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
SHPRH-202ENST00000367503 MBD3O95983 291 aa14.94□□□□□ -0.02
SHPRH-202ENST00000367503 PDE4CQ08493 712 aa14.94□□□□□ -0.02
SHPRH-202ENST00000367503 EVC2Q86UK5 1308 aa14.94□□□□□ -0.02
SHPRH-202ENST00000367503 CASKIN1Q8WXD9 1431 aa14.94□□□□□ -0.02
SHPRH-202ENST00000367503 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
SHPRH-202ENST00000367503 TSPY26PQ9H489 355 aa14.93□□□□□ -0.02
SHPRH-202ENST00000367503 HSP90B1P14625 803 aaKnown RBP14.93□□□□□ -0.02
SHPRH-202ENST00000367503 CLCN1P35523 988 aa14.93□□□□□ -0.02
SHPRH-202ENST00000367503 HOMER1Q86YM7 354 aa14.93□□□□□ -0.02
SHPRH-202ENST00000367503 KIF3AQ9Y496 699 aa14.92□□□□□ -0.02
SHPRH-202ENST00000367503 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
SHPRH-202ENST00000367503 RUNDC1Q96C34 613 aa14.92□□□□□ -0.02
SHPRH-202ENST00000367503 CCDC34Q96HJ3 373 aa14.92□□□□□ -0.02
SHPRH-202ENST00000367503 ZHX1Q9UKY1 873 aaPredicted RBP14.92□□□□□ -0.02
SHPRH-202ENST00000367503 FGD5Q6ZNL6 1462 aa14.91□□□□□ -0.02
SHPRH-202ENST00000367503 PANK1Q8TE04 598 aa14.91□□□□□ -0.02
SHPRH-202ENST00000367503 ARAP1Q96P48 1450 aa14.91□□□□□ -0.02
SHPRH-202ENST00000367503 MNS1Q8NEH6 495 aa14.91□□□□□ -0.02
SHPRH-202ENST00000367503 CCDC184Q52MB2 194 aa14.91□□□□□ -0.02
SHPRH-202ENST00000367503 PRPF40AO75400 957 aaKnown RBP14.9□□□□□ -0.02
SHPRH-202ENST00000367503 FYCO1Q9BQS8 1478 aa14.9□□□□□ -0.02
SHPRH-202ENST00000367503 API5Q9BZZ5 524 aaKnown RBP14.9□□□□□ -0.02
SHPRH-202ENST00000367503 TPD52L1Q16890 204 aaPredicted RBP14.89□□□□□ -0.03
SHPRH-202ENST00000367503 SASS6Q6UVJ0 657 aa14.89□□□□□ -0.03
SHPRH-202ENST00000367503 ELL2O00472 640 aaPredicted RBP14.89□□□□□ -0.03
SHPRH-202ENST00000367503 PDCL2Q8N4E4 241 aa14.89□□□□□ -0.03
SHPRH-202ENST00000367503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHPRH-202ENST00000367503 BCL11BQ9C0K0 894 aaPredicted RBP14.89□□□□□ -0.03
SHPRH-202ENST00000367503 CBX1P83916 185 aa14.89□□□□□ -0.03
SHPRH-202ENST00000367503 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
SHPRH-202ENST00000367503 CALRP27797 417 aaKnown RBP14.88□□□□□ -0.03
SHPRH-202ENST00000367503 CIZ1Q9ULV3 898 aaPredicted RBP14.88□□□□□ -0.03
SHPRH-202ENST00000367503 PDZRN3Q9UPQ7 1066 aa14.88□□□□□ -0.03
SHPRH-202ENST00000367503 LETM1O95202 739 aaPredicted RBP14.88□□□□□ -0.03
SHPRH-202ENST00000367503 MAPK8IP2Q13387 824 aaPredicted RBP14.88□□□□□ -0.03
SHPRH-202ENST00000367503 LNPKQ9C0E8 428 aa14.88□□□□□ -0.03
SHPRH-202ENST00000367503 PTPRGP23470 1445 aa14.87□□□□□ -0.03
SHPRH-202ENST00000367503 ANKRD50Q9ULJ7 1429 aa14.87□□□□□ -0.03
SHPRH-202ENST00000367503 INTS3Q68E01 1043 aaKnown RBP14.87□□□□□ -0.03
SHPRH-202ENST00000367503 CHMP4CQ96CF2 233 aa14.87□□□□□ -0.03
SHPRH-202ENST00000367503 GAPVD1Q14C86 1478 aa14.86□□□□□ -0.03
SHPRH-202ENST00000367503 ZNF644Q9H582 1327 aaPredicted RBP14.86□□□□□ -0.03
SHPRH-202ENST00000367503 AMPHP49418 695 aa14.86□□□□□ -0.03
SHPRH-202ENST00000367503 DIAPH1O60610 1272 aaKnown RBP14.86□□□□□ -0.03
SHPRH-202ENST00000367503 SF3A1Q15459 793 aaKnown RBP14.86□□□□□ -0.03
SHPRH-202ENST00000367503 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
SHPRH-202ENST00000367503 CHMP3Q9Y3E7 222 aa14.86□□□□□ -0.03
SHPRH-202ENST00000367503 NUTM2DQ5VT03 806 aaPredicted RBP14.86□□□□□ -0.03
SHPRH-202ENST00000367503 ADAMTS8Q9UP79 889 aa14.86□□□□□ -0.03
SHPRH-202ENST00000367503 RILPL2Q969X0 211 aa14.86□□□□□ -0.03
SHPRH-202ENST00000367503 HSP90B2PQ58FF3 399 aa14.85□□□□□ -0.03
SHPRH-202ENST00000367503 WDR97A6NE52 1622 aa14.85□□□□□ -0.03
SHPRH-202ENST00000367503 H3BQV1 296 aa14.85□□□□□ -0.03
SHPRH-202ENST00000367503 GORABQ5T7V8 394 aa14.85□□□□□ -0.03
SHPRH-202ENST00000367503 IFFO2Q5TF58 517 aa14.85□□□□□ -0.03
SHPRH-202ENST00000367503 ACBD3Q9H3P7 528 aa14.85□□□□□ -0.03
SHPRH-202ENST00000367503 NPHP1O15259 732 aa14.85□□□□□ -0.03
SHPRH-202ENST00000367503 CDC45O75419 566 aa14.85□□□□□ -0.03
SHPRH-202ENST00000367503 RIPK4P57078 832 aa14.84□□□□□ -0.03
SHPRH-202ENST00000367503 COG3Q96JB2 828 aa14.84□□□□□ -0.03
SHPRH-202ENST00000367503 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
SHPRH-202ENST00000367503 CCDC112Q8NEF3 446 aa14.84□□□□□ -0.03
SHPRH-202ENST00000367503 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
SHPRH-202ENST00000367503 CGNQ9P2M7 1197 aaKnown RBP14.84□□□□□ -0.03
SHPRH-202ENST00000367503 PDE3AQ14432 1141 aa14.83□□□□□ -0.04
SHPRH-202ENST00000367503 TSPYL1Q9H0U9 437 aa14.83□□□□□ -0.04
SHPRH-202ENST00000367503 ROCK1Q13464 1354 aa14.83□□□□□ -0.04
SHPRH-202ENST00000367503 BICD2Q8TD16 824 aa14.83□□□□□ -0.04
SHPRH-202ENST00000367503 XPCQ01831 940 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms