RNA–Protein interactions for RNA: ENST00000366997.8

LPGAT1-202, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPGAT1, Length 7,782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-202ENST00000366997 AMPHP49418 695 aa14.43□□□□□ -0.1
LPGAT1-202ENST00000366997 PDE4CQ08493 712 aa14.42□□□□□ -0.1
LPGAT1-202ENST00000366997 NCBP3Q53F19 620 aaKnown RBP14.42□□□□□ -0.1
LPGAT1-202ENST00000366997 KIF3AQ9Y496 699 aa14.42□□□□□ -0.1
LPGAT1-202ENST00000366997 RIPK4P57078 832 aa14.41□□□□□ -0.1
LPGAT1-202ENST00000366997 NUCB2P80303 420 aa14.41□□□□□ -0.1
LPGAT1-202ENST00000366997 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
LPGAT1-202ENST00000366997 CSB-PGBD3P0DP91 1061 aa14.41□□□□□ -0.1
LPGAT1-202ENST00000366997 TPD52L1Q16890 204 aaPredicted RBP14.41□□□□□ -0.1
LPGAT1-202ENST00000366997 NECTIN2Q92692 538 aa14.41□□□□□ -0.1
LPGAT1-202ENST00000366997 FBXW7Q969H0 707 aa14.41□□□□□ -0.1
LPGAT1-202ENST00000366997 FGD6Q6ZV73 1430 aa14.41□□□□□ -0.1
LPGAT1-202ENST00000366997 LRRC9Q6ZRR7 1453 aa14.4□□□□□ -0.1
LPGAT1-202ENST00000366997 RUNDC1Q96C34 613 aa14.4□□□□□ -0.1
LPGAT1-202ENST00000366997 ANO2Q9NQ90 1003 aa14.4□□□□□ -0.1
LPGAT1-202ENST00000366997 DIAPH3Q9NSV4 1193 aa14.4□□□□□ -0.1
LPGAT1-202ENST00000366997 ADAMTS8Q9UP79 889 aa14.4□□□□□ -0.1
LPGAT1-202ENST00000366997 HDAC5Q9UQL6 1122 aa14.4□□□□□ -0.1
LPGAT1-202ENST00000366997 RNF214Q8ND24 703 aa14.4□□□□□ -0.1
LPGAT1-202ENST00000366997 MSH5O43196 834 aa14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 INTS3Q68E01 1043 aaKnown RBP14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 TOMM22Q9NS69 142 aa14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 RSPH4AQ5TD94 716 aa14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 CHMP4AQ9BY43 222 aa14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 WASHC2CQ9Y4E1 1318 aa14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 BRD4O60885 1362 aaPredicted RBP14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 RBM10P98175 930 aaKnown RBP14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 CUX1P39880 1505 aa14.39□□□□□ -0.11
LPGAT1-202ENST00000366997 CAVIN1Q6NZI2 390 aaKnown RBP14.38□□□□□ -0.11
LPGAT1-202ENST00000366997 BACH2Q9BYV9 841 aa14.38□□□□□ -0.11
LPGAT1-202ENST00000366997 BICD2Q8TD16 824 aa14.38□□□□□ -0.11
LPGAT1-202ENST00000366997 HOMER1Q86YM7 354 aa14.38□□□□□ -0.11
LPGAT1-202ENST00000366997 NGDNQ8NEJ9 315 aaKnown RBP14.38□□□□□ -0.11
LPGAT1-202ENST00000366997 IFT57Q9NWB7 429 aa14.38□□□□□ -0.11
LPGAT1-202ENST00000366997 EVC2Q86UK5 1308 aa14.38□□□□□ -0.11
LPGAT1-202ENST00000366997 VPS37CA5D8V6 355 aaPredicted RBP14.37□□□□□ -0.11
LPGAT1-202ENST00000366997 SETQ01105 290 aaPredicted RBP14.37□□□□□ -0.11
LPGAT1-202ENST00000366997 CCDC39Q9UFE4 941 aa14.36□□□□□ -0.11
LPGAT1-202ENST00000366997 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
LPGAT1-202ENST00000366997 FOSBP53539 338 aa14.36□□□□□ -0.11
LPGAT1-202ENST00000366997 SMC3Q9UQE7 1217 aa14.36□□□□□ -0.11
LPGAT1-202ENST00000366997 GPS2Q13227 327 aa14.35□□□□□ -0.11
LPGAT1-202ENST00000366997 CCDC184Q52MB2 194 aa14.35□□□□□ -0.11
LPGAT1-202ENST00000366997 TEX35Q5T0J7 233 aa14.35□□□□□ -0.11
LPGAT1-202ENST00000366997 SASS6Q6UVJ0 657 aa14.35□□□□□ -0.11
LPGAT1-202ENST00000366997 TSR1Q2NL82 804 aaKnown RBP14.35□□□□□ -0.11
LPGAT1-202ENST00000366997 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
LPGAT1-202ENST00000366997 PKNOX2Q96KN3 472 aa14.35□□□□□ -0.11
LPGAT1-202ENST00000366997 RUFY2Q8WXA3 655 aa14.34□□□□□ -0.11
LPGAT1-202ENST00000366997 ZNF644Q9H582 1327 aaPredicted RBP14.34□□□□□ -0.11
LPGAT1-202ENST00000366997 TPM2P07951 284 aa14.34□□□□□ -0.11
LPGAT1-202ENST00000366997 MINK1Q8N4C8 1332 aaPredicted RBP14.34□□□□□ -0.11
LPGAT1-202ENST00000366997 COG3Q96JB2 828 aa14.34□□□□□ -0.11
LPGAT1-202ENST00000366997 ZKSCAN1P17029 563 aaPredicted RBP14.34□□□□□ -0.11
LPGAT1-202ENST00000366997 EIF2S2P20042 333 aaKnown RBP14.34□□□□□ -0.11
LPGAT1-202ENST00000366997 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.11
LPGAT1-202ENST00000366997 PDZRN3Q9UPQ7 1066 aa14.33□□□□□ -0.12
LPGAT1-202ENST00000366997 ROCK1Q13464 1354 aa14.32□□□□□ -0.12
LPGAT1-202ENST00000366997 HMOX1P09601 288 aa14.32□□□□□ -0.12
LPGAT1-202ENST00000366997 NGEFQ8N5V2 710 aa14.32□□□□□ -0.12
LPGAT1-202ENST00000366997 API5Q9BZZ5 524 aaKnown RBP14.32□□□□□ -0.12
LPGAT1-202ENST00000366997 TPM1P09493 284 aa14.31□□□□□ -0.12
LPGAT1-202ENST00000366997 BCAR3O75815 825 aa14.31□□□□□ -0.12
LPGAT1-202ENST00000366997 C9orf78Q9NZ63 289 aaPredicted RBP14.31□□□□□ -0.12
LPGAT1-202ENST00000366997 PRPF40AO75400 957 aaKnown RBP14.31□□□□□ -0.12
LPGAT1-202ENST00000366997 CDC45O75419 566 aa14.31□□□□□ -0.12
LPGAT1-202ENST00000366997 CCDC27Q2M243 656 aa14.31□□□□□ -0.12
LPGAT1-202ENST00000366997 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
LPGAT1-202ENST00000366997 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
LPGAT1-202ENST00000366997 CCDC173Q0VFZ6 552 aa14.3□□□□□ -0.12
LPGAT1-202ENST00000366997 IFIT2P09913 472 aaKnown RBP14.3□□□□□ -0.12
LPGAT1-202ENST00000366997 SMG6Q86US8 1419 aaKnown RBP14.3□□□□□ -0.12
LPGAT1-202ENST00000366997 MAP7D2Q96T17 732 aa14.3□□□□□ -0.12
LPGAT1-202ENST00000366997 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
LPGAT1-202ENST00000366997 CADPSQ9ULU8 1353 aa14.3□□□□□ -0.12
LPGAT1-202ENST00000366997 JPH4Q96JJ6 628 aa14.29□□□□□ -0.12
LPGAT1-202ENST00000366997 MIA2Q96PC5 1412 aa14.29□□□□□ -0.12
LPGAT1-202ENST00000366997 MTERF4Q7Z6M4 381 aaKnown RBP14.29□□□□□ -0.12
LPGAT1-202ENST00000366997 GRPEL1Q9HAV7 217 aa14.28□□□□□ -0.12
LPGAT1-202ENST00000366997 FKBP5Q13451 457 aaPredicted RBP14.28□□□□□ -0.12
LPGAT1-202ENST00000366997 CCDC70Q6NSX1 233 aa14.28□□□□□ -0.12
LPGAT1-202ENST00000366997 C1orf115Q9H7X2 142 aa14.28□□□□□ -0.12
LPGAT1-202ENST00000366997 TSPY26PQ9H489 355 aa14.28□□□□□ -0.12
LPGAT1-202ENST00000366997 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.12
LPGAT1-202ENST00000366997 AAMPQ13685 434 aa14.27□□□□□ -0.12
LPGAT1-202ENST00000366997 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.13
LPGAT1-202ENST00000366997 NCOA2Q15596 1464 aa14.27□□□□□ -0.13
LPGAT1-202ENST00000366997 MPNDQ8N594 471 aa14.27□□□□□ -0.13
LPGAT1-202ENST00000366997 PPP2R1AP30153 589 aa14.26□□□□□ -0.13
LPGAT1-202ENST00000366997 SPC24Q8NBT2 197 aa14.26□□□□□ -0.13
LPGAT1-202ENST00000366997 PCMTD1Q96MG8 357 aaPredicted RBP14.26□□□□□ -0.13
LPGAT1-202ENST00000366997 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
LPGAT1-202ENST00000366997 RNF20Q5VTR2 975 aa14.26□□□□□ -0.13
LPGAT1-202ENST00000366997 TRIM29Q14134 588 aa14.26□□□□□ -0.13
LPGAT1-202ENST00000366997 MNS1Q8NEH6 495 aa14.26□□□□□ -0.13
LPGAT1-202ENST00000366997 PNISRQ8TF01 805 aaKnown RBP14.26□□□□□ -0.13
LPGAT1-202ENST00000366997 MARCH6O60337 910 aa14.25□□□□□ -0.13
LPGAT1-202ENST00000366997 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
LPGAT1-202ENST00000366997 C1orf141Q5JVX7 400 aa14.25□□□□□ -0.13
LPGAT1-202ENST00000366997 MTHFSP49914 203 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms