RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 NRKQ7Z2Y5 1582 aa13.5□□□□□ -0.25
CNIH4-202ENST00000366857 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
CNIH4-202ENST00000366857 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
CNIH4-202ENST00000366857 ARID4BQ4LE39 1312 aaPredicted RBP13.49□□□□□ -0.25
CNIH4-202ENST00000366857 TESK2Q96S53 571 aa13.49□□□□□ -0.25
CNIH4-202ENST00000366857 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
CNIH4-202ENST00000366857 SLIT1O75093 1534 aa13.48□□□□□ -0.25
CNIH4-202ENST00000366857 ALKQ9UM73 1620 aa13.48□□□□□ -0.25
CNIH4-202ENST00000366857 CPS1P31327 1500 aa13.48□□□□□ -0.25
CNIH4-202ENST00000366857 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
CNIH4-202ENST00000366857 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
CNIH4-202ENST00000366857 TULP4Q9NRJ4 1543 aa13.47□□□□□ -0.25
CNIH4-202ENST00000366857 ARHGAP23Q9P227 1491 aa13.46□□□□□ -0.25
CNIH4-202ENST00000366857 MIER1Q8N108 512 aa13.46□□□□□ -0.25
CNIH4-202ENST00000366857 RAPGEF3O95398 923 aa13.46□□□□□ -0.25
CNIH4-202ENST00000366857 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.25
CNIH4-202ENST00000366857 MON2Q7Z3U7 1717 aa13.45□□□□□ -0.26
CNIH4-202ENST00000366857 USP47Q96K76 1375 aa13.45□□□□□ -0.26
CNIH4-202ENST00000366857 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
CNIH4-202ENST00000366857 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
CNIH4-202ENST00000366857 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
CNIH4-202ENST00000366857 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
CNIH4-202ENST00000366857 KIF7Q2M1P5 1343 aa13.43□□□□□ -0.26
CNIH4-202ENST00000366857 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
CNIH4-202ENST00000366857 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
CNIH4-202ENST00000366857 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.41□□□□□ -0.26
CNIH4-202ENST00000366857 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
CNIH4-202ENST00000366857 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
CNIH4-202ENST00000366857 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
CNIH4-202ENST00000366857 CD163L1Q9NR16 1453 aa13.39□□□□□ -0.27
CNIH4-202ENST00000366857 DISP3Q9P2K9 1392 aa13.39□□□□□ -0.27
CNIH4-202ENST00000366857 TECPR2O15040 1411 aa13.38□□□□□ -0.27
CNIH4-202ENST00000366857 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
CNIH4-202ENST00000366857 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
CNIH4-202ENST00000366857 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
CNIH4-202ENST00000366857 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
CNIH4-202ENST00000366857 KANK1Q14678 1352 aa13.36□□□□□ -0.27
CNIH4-202ENST00000366857 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
CNIH4-202ENST00000366857 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
CNIH4-202ENST00000366857 PARD3Q8TEW0 1356 aa13.33□□□□□ -0.27
CNIH4-202ENST00000366857 KIF3BO15066 747 aa13.33□□□□□ -0.28
CNIH4-202ENST00000366857 INSRP06213 1382 aa13.32□□□□□ -0.28
CNIH4-202ENST00000366857 RPGRIP1LQ68CZ1 1315 aa13.32□□□□□ -0.28
CNIH4-202ENST00000366857 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
CNIH4-202ENST00000366857 NWD1Q149M9 1564 aa13.32□□□□□ -0.28
CNIH4-202ENST00000366857 ADGRF5Q8IZF2 1346 aa13.32□□□□□ -0.28
CNIH4-202ENST00000366857 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
CNIH4-202ENST00000366857 LRPPRCP42704 1394 aaKnown RBP13.31□□□□□ -0.28
CNIH4-202ENST00000366857 CCER2I3L3R5 266 aa13.31□□□□□ -0.28
CNIH4-202ENST00000366857 NPC1L1Q9UHC9 1359 aa13.3□□□□□ -0.28
CNIH4-202ENST00000366857 RGPD8O14715 1765 aaPredicted RBP13.3□□□□□ -0.28
CNIH4-202ENST00000366857 EIF4G2P78344 907 aaKnown RBP eCLIP13.29□□□□□ -0.28
CNIH4-202ENST00000366857 CEP170BQ9Y4F5 1589 aaPredicted RBP13.29□□□□□ -0.28
CNIH4-202ENST00000366857 C14orf93Q9H972 538 aaKnown RBP13.29□□□□□ -0.28
CNIH4-202ENST00000366857 ADAMTS13Q76LX8 1427 aa13.29□□□□□ -0.28
CNIH4-202ENST00000366857 CDC42BPGQ6DT37 1551 aa13.28□□□□□ -0.28
CNIH4-202ENST00000366857 RGPD1P0DJD0 1748 aa13.28□□□□□ -0.28
CNIH4-202ENST00000366857 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
CNIH4-202ENST00000366857 ROCK2O75116 1388 aaKnown RBP13.27□□□□□ -0.28
CNIH4-202ENST00000366857 STRCQ7RTU9 1775 aa13.27□□□□□ -0.28
CNIH4-202ENST00000366857 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.28
CNIH4-202ENST00000366857 ITSN1Q15811 1721 aa13.27□□□□□ -0.29
CNIH4-202ENST00000366857 DCAF11Q8TEB1 546 aa13.26□□□□□ -0.29
CNIH4-202ENST00000366857 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
CNIH4-202ENST00000366857 PHRF1Q9P1Y6 1649 aaKnown RBP13.25□□□□□ -0.29
CNIH4-202ENST00000366857 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
CNIH4-202ENST00000366857 HIRIP3Q9BW71 556 aaPredicted RBP13.25□□□□□ -0.29
CNIH4-202ENST00000366857 LRRC7Q96NW7 1537 aa13.24□□□□□ -0.29
CNIH4-202ENST00000366857 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
CNIH4-202ENST00000366857 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
CNIH4-202ENST00000366857 IDI1Q13907 227 aa13.22□□□□□ -0.29
CNIH4-202ENST00000366857 ST20-MTHFSA0A0A6YYL1 179 aa13.22□□□□□ -0.29
CNIH4-202ENST00000366857 PUS7Q96PZ0 661 aaKnown RBP13.21□□□□□ -0.29
CNIH4-202ENST00000366857 CCDC184Q52MB2 194 aa13.21□□□□□ -0.3
CNIH4-202ENST00000366857 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
CNIH4-202ENST00000366857 SLC52A1Q9NWF4 448 aa13.2□□□□□ -0.3
CNIH4-202ENST00000366857 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
CNIH4-202ENST00000366857 FAM135BQ49AJ0 1406 aa13.18□□□□□ -0.3
CNIH4-202ENST00000366857 TRPM3Q9HCF6 1732 aaPredicted RBP13.18□□□□□ -0.3
CNIH4-202ENST00000366857 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
CNIH4-202ENST00000366857 WASHC2CQ9Y4E1 1318 aa13.18□□□□□ -0.3
CNIH4-202ENST00000366857 DDX10Q13206 875 aaKnown RBP13.17□□□□□ -0.3
CNIH4-202ENST00000366857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
CNIH4-202ENST00000366857 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
CNIH4-202ENST00000366857 RIMS2Q9UQ26 1411 aa13.16□□□□□ -0.3
CNIH4-202ENST00000366857 PEAK1Q9H792 1746 aa13.16□□□□□ -0.3
CNIH4-202ENST00000366857 CAMTA1Q9Y6Y1 1673 aa13.15□□□□□ -0.3
CNIH4-202ENST00000366857 SMG6Q86US8 1419 aaKnown RBP13.15□□□□□ -0.3
CNIH4-202ENST00000366857 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
CNIH4-202ENST00000366857 PIK3C2AO00443 1686 aa13.15□□□□□ -0.31
CNIH4-202ENST00000366857 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
CNIH4-202ENST00000366857 CPSF1Q10570 1443 aaKnown RBP13.14□□□□□ -0.31
CNIH4-202ENST00000366857 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
CNIH4-202ENST00000366857 MAP2P11137 1827 aaKnown RBP13.14□□□□□ -0.31
CNIH4-202ENST00000366857 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
CNIH4-202ENST00000366857 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
CNIH4-202ENST00000366857 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
CNIH4-202ENST00000366857 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
CNIH4-202ENST00000366857 TMEM2Q9UHN6 1383 aa13.13□□□□□ -0.31
CNIH4-202ENST00000366857 SETD1BQ9UPS6 1966 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms