RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 SLC52A1Q9NWF4 448 aa17.9■□□□□ 0.46
MRPL55-212ENST00000366739 MSH6P52701 1360 aa17.89■□□□□ 0.45
MRPL55-212ENST00000366739 ZFYVE9O95405 1425 aa17.87■□□□□ 0.45
MRPL55-212ENST00000366739 ADGRL2O95490 1459 aa17.87■□□□□ 0.45
MRPL55-212ENST00000366739 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
MRPL55-212ENST00000366739 PLEKHG1Q9ULL1 1385 aa17.85■□□□□ 0.45
MRPL55-212ENST00000366739 RPRD2Q5VT52 1461 aaKnown RBP17.84■□□□□ 0.45
MRPL55-212ENST00000366739 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
MRPL55-212ENST00000366739 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.45
MRPL55-212ENST00000366739 JCADQ9P266 1359 aa17.83■□□□□ 0.45
MRPL55-212ENST00000366739 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.44
MRPL55-212ENST00000366739 PHLPP1O60346 1717 aa17.83■□□□□ 0.44
MRPL55-212ENST00000366739 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
MRPL55-212ENST00000366739 MYO5BQ9ULV0 1848 aa17.81■□□□□ 0.44
MRPL55-212ENST00000366739 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
MRPL55-212ENST00000366739 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
MRPL55-212ENST00000366739 CHD2O14647 1828 aaKnown RBP17.8■□□□□ 0.44
MRPL55-212ENST00000366739 SETD1AO15047 1707 aaKnown RBP17.8■□□□□ 0.44
MRPL55-212ENST00000366739 COL16A1Q07092 1604 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-212ENST00000366739 HDGFP51858 240 aaKnown RBP17.78■□□□□ 0.44
MRPL55-212ENST00000366739 TBX22Q9Y458 520 aa17.78■□□□□ 0.44
MRPL55-212ENST00000366739 CHGAP10645 457 aaKnown RBP17.77■□□□□ 0.44
MRPL55-212ENST00000366739 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
MRPL55-212ENST00000366739 C14orf37Q86TY3 774 aa17.77■□□□□ 0.44
MRPL55-212ENST00000366739 LRP6O75581 1613 aa17.76■□□□□ 0.43
MRPL55-212ENST00000366739 ADAMTS13Q76LX8 1427 aa17.76■□□□□ 0.43
MRPL55-212ENST00000366739 NCOA3Q9Y6Q9 1424 aa17.75■□□□□ 0.43
MRPL55-212ENST00000366739 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
MRPL55-212ENST00000366739 UNC13BO14795 1591 aa17.74■□□□□ 0.43
MRPL55-212ENST00000366739 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
MRPL55-212ENST00000366739 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
MRPL55-212ENST00000366739 CADPS2Q86UW7 1296 aa17.72■□□□□ 0.43
MRPL55-212ENST00000366739 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-212ENST00000366739 E9PCH4 1651 aa17.71■□□□□ 0.43
MRPL55-212ENST00000366739 DIP2AQ14689 1571 aa17.71■□□□□ 0.43
MRPL55-212ENST00000366739 ATF3P18847 181 aa17.71■□□□□ 0.43
MRPL55-212ENST00000366739 C19orf44Q9H6X5 657 aa17.71■□□□□ 0.43
MRPL55-212ENST00000366739 AHDC1Q5TGY3 1603 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-212ENST00000366739 PIK3R4Q99570 1358 aa17.7■□□□□ 0.42
MRPL55-212ENST00000366739 PTPRUQ92729 1446 aa17.69■□□□□ 0.42
MRPL55-212ENST00000366739 ZNF772Q68DY9 489 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-212ENST00000366739 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
MRPL55-212ENST00000366739 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
MRPL55-212ENST00000366739 AMOTL2Q9Y2J4 779 aa17.67■□□□□ 0.42
MRPL55-212ENST00000366739 IQGAP3Q86VI3 1631 aa17.67■□□□□ 0.42
MRPL55-212ENST00000366739 SHPRHQ149N8 1683 aa17.67■□□□□ 0.42
MRPL55-212ENST00000366739 TRPM2O94759 1503 aa17.67■□□□□ 0.42
MRPL55-212ENST00000366739 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
MRPL55-212ENST00000366739 ROCK1Q13464 1354 aa17.65■□□□□ 0.42
MRPL55-212ENST00000366739 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-212ENST00000366739 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-212ENST00000366739 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-212ENST00000366739 NUP155O75694 1391 aa17.64■□□□□ 0.41
MRPL55-212ENST00000366739 DCCP43146 1447 aa17.62■□□□□ 0.41
MRPL55-212ENST00000366739 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
MRPL55-212ENST00000366739 RXRBP28702 533 aa17.61■□□□□ 0.41
MRPL55-212ENST00000366739 NRXN3Q9Y4C0 1643 aa17.61■□□□□ 0.41
MRPL55-212ENST00000366739 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
MRPL55-212ENST00000366739 MST1RQ04912 1400 aa17.59■□□□□ 0.41
MRPL55-212ENST00000366739 SETBP1Q9Y6X0 1596 aa17.58■□□□□ 0.41
MRPL55-212ENST00000366739 SETD5Q9C0A6 1442 aa17.58■□□□□ 0.41
MRPL55-212ENST00000366739 AFF2P51816 1311 aa17.58■□□□□ 0.4
MRPL55-212ENST00000366739 ITGAEP38570 1179 aa17.58■□□□□ 0.4
MRPL55-212ENST00000366739 METP08581 1390 aa17.57■□□□□ 0.4
MRPL55-212ENST00000366739 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
MRPL55-212ENST00000366739 DDX17Q92841 729 aaKnown RBP17.56■□□□□ 0.4
MRPL55-212ENST00000366739 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
MRPL55-212ENST00000366739 NHSL1Q5SYE7 1610 aa17.55■□□□□ 0.4
MRPL55-212ENST00000366739 LRRC59Q96AG4 307 aaKnown RBP17.54■□□□□ 0.4
MRPL55-212ENST00000366739 ADGRL3Q9HAR2 1447 aa17.54■□□□□ 0.4
MRPL55-212ENST00000366739 SPHKAPQ2M3C7 1700 aa17.53■□□□□ 0.4
MRPL55-212ENST00000366739 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
MRPL55-212ENST00000366739 PNPLA6Q8IY17 1366 aa17.53■□□□□ 0.4
MRPL55-212ENST00000366739 RGS12O14924 1447 aa17.51■□□□□ 0.39
MRPL55-212ENST00000366739 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
MRPL55-212ENST00000366739 NEXMIFQ5QGS0 1516 aa17.5■□□□□ 0.39
MRPL55-212ENST00000366739 NALCNQ8IZF0 1738 aa17.5■□□□□ 0.39
MRPL55-212ENST00000366739 CLTCL1P53675 1640 aa17.48■□□□□ 0.39
MRPL55-212ENST00000366739 RBM6P78332 1123 aaKnown RBP17.48■□□□□ 0.39
MRPL55-212ENST00000366739 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
MRPL55-212ENST00000366739 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
MRPL55-212ENST00000366739 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
MRPL55-212ENST00000366739 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
MRPL55-212ENST00000366739 ROBO2Q9HCK4 1378 aa17.43■□□□□ 0.38
MRPL55-212ENST00000366739 ORAI2Q96SN7 254 aa17.43■□□□□ 0.38
MRPL55-212ENST00000366739 PTCH1Q13635 1447 aa17.43■□□□□ 0.38
MRPL55-212ENST00000366739 SOS2Q07890 1332 aaPredicted RBP17.42■□□□□ 0.38
MRPL55-212ENST00000366739 LAMC1P11047 1609 aa17.41■□□□□ 0.38
MRPL55-212ENST00000366739 USP21Q9UK80 565 aa17.39■□□□□ 0.37
MRPL55-212ENST00000366739 KIF1BO60333 1816 aa17.38■□□□□ 0.37
MRPL55-212ENST00000366739 VGFO15240 615 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-212ENST00000366739 ATAD2Q6PL18 1390 aa17.37■□□□□ 0.37
MRPL55-212ENST00000366739 NAIPQ13075 1403 aa17.37■□□□□ 0.37
MRPL55-212ENST00000366739 PRAG1Q86YV5 1406 aa17.37■□□□□ 0.37
MRPL55-212ENST00000366739 FNBP4Q8N3X1 1017 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-212ENST00000366739 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-212ENST00000366739 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
MRPL55-212ENST00000366739 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
MRPL55-212ENST00000366739 ATRNO75882 1429 aa17.34■□□□□ 0.37
MRPL55-212ENST00000366739 COL22A1Q8NFW1 1626 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms