RNA–Protein interactions for RNA: ENST00000366733.5

MRPL55-207, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-207ENST00000366733 SLIT1O75093 1534 aa19.02■□□□□ 0.64
MRPL55-207ENST00000366733 CHGAP10645 457 aaKnown RBP19.02■□□□□ 0.64
MRPL55-207ENST00000366733 DCAF11Q8TEB1 546 aa19.02■□□□□ 0.64
MRPL55-207ENST00000366733 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
MRPL55-207ENST00000366733 STAG3Q9UJ98 1225 aa19.01■□□□□ 0.63
MRPL55-207ENST00000366733 PRAG1Q86YV5 1406 aa19■□□□□ 0.63
MRPL55-207ENST00000366733 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
MRPL55-207ENST00000366733 THEMISQ8N1K5 641 aaPredicted RBP19■□□□□ 0.63
MRPL55-207ENST00000366733 SETD1BQ9UPS6 1966 aaKnown RBP19■□□□□ 0.63
MRPL55-207ENST00000366733 IFT172Q9UG01 1749 aa18.99■□□□□ 0.63
MRPL55-207ENST00000366733 RIMS2Q9UQ26 1411 aa18.99■□□□□ 0.63
MRPL55-207ENST00000366733 VGFO15240 615 aaPredicted RBP18.98■□□□□ 0.63
MRPL55-207ENST00000366733 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
MRPL55-207ENST00000366733 PIK3C2GO75747 1445 aa18.96■□□□□ 0.63
MRPL55-207ENST00000366733 PPLO60437 1756 aa18.96■□□□□ 0.63
MRPL55-207ENST00000366733 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
MRPL55-207ENST00000366733 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
MRPL55-207ENST00000366733 ADGRF5Q8IZF2 1346 aa18.95■□□□□ 0.62
MRPL55-207ENST00000366733 RALGAPBQ86X10 1494 aa18.93■□□□□ 0.62
MRPL55-207ENST00000366733 KDM2AQ9Y2K7 1162 aa18.93■□□□□ 0.62
MRPL55-207ENST00000366733 LMTK3Q96Q04 1460 aa18.91■□□□□ 0.62
MRPL55-207ENST00000366733 MYO5BQ9ULV0 1848 aa18.91■□□□□ 0.62
MRPL55-207ENST00000366733 GPRASP1Q5JY77 1395 aa18.91■□□□□ 0.62
MRPL55-207ENST00000366733 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
MRPL55-207ENST00000366733 LTKP29376 864 aa18.9■□□□□ 0.62
MRPL55-207ENST00000366733 PLEKHG1Q9ULL1 1385 aa18.9■□□□□ 0.62
MRPL55-207ENST00000366733 EID1Q9Y6B2 187 aa18.89■□□□□ 0.61
MRPL55-207ENST00000366733 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
MRPL55-207ENST00000366733 TXNDC2Q86VQ3 553 aa18.88■□□□□ 0.61
MRPL55-207ENST00000366733 C14orf93Q9H972 538 aaKnown RBP18.88■□□□□ 0.61
MRPL55-207ENST00000366733 KIAA1210Q9ULL0 1709 aa18.86■□□□□ 0.61
MRPL55-207ENST00000366733 MED14O60244 1454 aa18.86■□□□□ 0.61
MRPL55-207ENST00000366733 ANKLE2Q86XL3 938 aa18.86■□□□□ 0.61
MRPL55-207ENST00000366733 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
MRPL55-207ENST00000366733 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
MRPL55-207ENST00000366733 LAMC1P11047 1609 aa18.84■□□□□ 0.61
MRPL55-207ENST00000366733 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.61
MRPL55-207ENST00000366733 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
MRPL55-207ENST00000366733 NRXN3Q9Y4C0 1643 aa18.82■□□□□ 0.6
MRPL55-207ENST00000366733 ADGRB1O14514 1584 aa18.82■□□□□ 0.6
MRPL55-207ENST00000366733 CFAP70Q5T0N1 1121 aa18.82■□□□□ 0.6
MRPL55-207ENST00000366733 ALKQ9UM73 1620 aa18.81■□□□□ 0.6
MRPL55-207ENST00000366733 DIP2AQ14689 1571 aa18.81■□□□□ 0.6
MRPL55-207ENST00000366733 NBPF1Q3BBV0 1214 aa18.8■□□□□ 0.6
MRPL55-207ENST00000366733 TBX22Q9Y458 520 aa18.79■□□□□ 0.6
MRPL55-207ENST00000366733 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
MRPL55-207ENST00000366733 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
MRPL55-207ENST00000366733 CARD11Q9BXL7 1154 aa18.77■□□□□ 0.6
MRPL55-207ENST00000366733 HSPA2P54652 639 aa18.76■□□□□ 0.59
MRPL55-207ENST00000366733 SETD1AO15047 1707 aaKnown RBP18.76■□□□□ 0.59
MRPL55-207ENST00000366733 PIK3R4Q99570 1358 aa18.76■□□□□ 0.59
MRPL55-207ENST00000366733 IQGAP1P46940 1657 aa18.76■□□□□ 0.59
MRPL55-207ENST00000366733 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
MRPL55-207ENST00000366733 METP08581 1390 aa18.74■□□□□ 0.59
MRPL55-207ENST00000366733 LRPPRCP42704 1394 aaKnown RBP18.74■□□□□ 0.59
MRPL55-207ENST00000366733 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-207ENST00000366733 USP47Q96K76 1375 aa18.73■□□□□ 0.59
MRPL55-207ENST00000366733 TECPR2O15040 1411 aa18.73■□□□□ 0.59
MRPL55-207ENST00000366733 YTHDC2Q9H6S0 1430 aaKnown RBP18.73■□□□□ 0.59
MRPL55-207ENST00000366733 ABCC11Q96J66 1382 aa18.72■□□□□ 0.59
MRPL55-207ENST00000366733 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
MRPL55-207ENST00000366733 TMEM132EQ6IEE7 984 aa18.7■□□□□ 0.58
MRPL55-207ENST00000366733 SLC26A8Q96RN1 970 aa18.7■□□□□ 0.58
MRPL55-207ENST00000366733 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
MRPL55-207ENST00000366733 EIF3AQ14152 1382 aaKnown RBP18.69■□□□□ 0.58
MRPL55-207ENST00000366733 SIRT1Q96EB6 747 aa18.69■□□□□ 0.58
MRPL55-207ENST00000366733 BCANQ96GW7 911 aa18.69■□□□□ 0.58
MRPL55-207ENST00000366733 PTPRUQ92729 1446 aa18.67■□□□□ 0.58
MRPL55-207ENST00000366733 HSPA5P11021 654 aaKnown RBP18.67■□□□□ 0.58
MRPL55-207ENST00000366733 STRCQ7RTU9 1775 aa18.67■□□□□ 0.58
MRPL55-207ENST00000366733 SBNO2Q9Y2G9 1366 aa18.66■□□□□ 0.58
MRPL55-207ENST00000366733 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
MRPL55-207ENST00000366733 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
MRPL55-207ENST00000366733 CPS1P31327 1500 aa18.65■□□□□ 0.58
MRPL55-207ENST00000366733 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
MRPL55-207ENST00000366733 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
MRPL55-207ENST00000366733 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
MRPL55-207ENST00000366733 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
MRPL55-207ENST00000366733 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
MRPL55-207ENST00000366733 TESK2Q96S53 571 aa18.62■□□□□ 0.57
MRPL55-207ENST00000366733 TRAK1Q9UPV9 953 aa18.62■□□□□ 0.57
MRPL55-207ENST00000366733 CENPJQ9HC77 1338 aaPredicted RBP18.61■□□□□ 0.57
MRPL55-207ENST00000366733 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
MRPL55-207ENST00000366733 KCNA6P17658 529 aa18.61■□□□□ 0.57
MRPL55-207ENST00000366733 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
MRPL55-207ENST00000366733 ROBO2Q9HCK4 1378 aa18.6■□□□□ 0.57
MRPL55-207ENST00000366733 STK26Q9P289 416 aa18.6■□□□□ 0.57
MRPL55-207ENST00000366733 ARHGEF28Q8N1W1 1705 aaKnown RBP18.59■□□□□ 0.57
MRPL55-207ENST00000366733 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.57
MRPL55-207ENST00000366733 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
MRPL55-207ENST00000366733 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
MRPL55-207ENST00000366733 CHD2O14647 1828 aaKnown RBP18.56■□□□□ 0.56
MRPL55-207ENST00000366733 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
MRPL55-207ENST00000366733 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
MRPL55-207ENST00000366733 POGKQ9P215 609 aa18.53■□□□□ 0.56
MRPL55-207ENST00000366733 NCOA3Q9Y6Q9 1424 aa18.52■□□□□ 0.56
MRPL55-207ENST00000366733 WAPLQ7Z5K2 1190 aa18.52■□□□□ 0.56
MRPL55-207ENST00000366733 MSH5O43196 834 aa18.51■□□□□ 0.55
MRPL55-207ENST00000366733 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
MRPL55-207ENST00000366733 ADGRB2O60241 1585 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms