RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
ZNF548-202ENST00000366197 TPM4P67936 248 aa12.74□□□□□ -0.37
ZNF548-202ENST00000366197 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
ZNF548-202ENST00000366197 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
ZNF548-202ENST00000366197 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
ZNF548-202ENST00000366197 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
ZNF548-202ENST00000366197 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
ZNF548-202ENST00000366197 FKBP5Q13451 457 aaPredicted RBP12.73□□□□□ -0.37
ZNF548-202ENST00000366197 SF3A1Q15459 793 aaKnown RBP12.73□□□□□ -0.37
ZNF548-202ENST00000366197 IPO9Q96P70 1041 aaKnown RBP12.73□□□□□ -0.37
ZNF548-202ENST00000366197 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
ZNF548-202ENST00000366197 NLRP6P59044 892 aa12.73□□□□□ -0.37
ZNF548-202ENST00000366197 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
ZNF548-202ENST00000366197 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
ZNF548-202ENST00000366197 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
ZNF548-202ENST00000366197 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
ZNF548-202ENST00000366197 MARCH6O60337 910 aa12.72□□□□□ -0.37
ZNF548-202ENST00000366197 GNAI1P63096 354 aa12.72□□□□□ -0.37
ZNF548-202ENST00000366197 DIAPH3Q9NSV4 1193 aa12.72□□□□□ -0.37
ZNF548-202ENST00000366197 NLRP2Q9NX02 1062 aa12.71□□□□□ -0.37
ZNF548-202ENST00000366197 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.37
ZNF548-202ENST00000366197 EXOC6Q8TAG9 804 aa12.71□□□□□ -0.37
ZNF548-202ENST00000366197 DEKP35659 375 aaKnown RBP12.71□□□□□ -0.37
ZNF548-202ENST00000366197 CUX1P39880 1505 aa12.71□□□□□ -0.38
ZNF548-202ENST00000366197 RUFY2Q8WXA3 655 aa12.7□□□□□ -0.38
ZNF548-202ENST00000366197 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
ZNF548-202ENST00000366197 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
ZNF548-202ENST00000366197 CRBNQ96SW2 442 aa12.7□□□□□ -0.38
ZNF548-202ENST00000366197 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
ZNF548-202ENST00000366197 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
ZNF548-202ENST00000366197 HMOX1P09601 288 aa12.7□□□□□ -0.38
ZNF548-202ENST00000366197 TSPYL4Q9UJ04 414 aa12.7□□□□□ -0.38
ZNF548-202ENST00000366197 CFAP70Q5T0N1 1121 aa12.7□□□□□ -0.38
ZNF548-202ENST00000366197 FAM161AQ3B820 660 aa12.69□□□□□ -0.38
ZNF548-202ENST00000366197 AKAP17AQ02040 695 aaKnown RBP12.69□□□□□ -0.38
ZNF548-202ENST00000366197 FAM184AQ8NB25 1140 aa12.69□□□□□ -0.38
ZNF548-202ENST00000366197 KIF7Q2M1P5 1343 aa12.69□□□□□ -0.38
ZNF548-202ENST00000366197 IFIT2P09913 472 aaKnown RBP12.69□□□□□ -0.38
ZNF548-202ENST00000366197 CASKIN1Q8WXD9 1431 aa12.69□□□□□ -0.38
ZNF548-202ENST00000366197 LRRC9Q6ZRR7 1453 aa12.68□□□□□ -0.38
ZNF548-202ENST00000366197 G3BP1Q13283 466 aaKnown RBP eCLIP12.68□□□□□ -0.38
ZNF548-202ENST00000366197 SYNE3Q6ZMZ3 975 aa12.68□□□□□ -0.38
ZNF548-202ENST00000366197 NOL10Q9BSC4 688 aaKnown RBP12.68□□□□□ -0.38
ZNF548-202ENST00000366197 PHF23Q9BUL5 403 aaPredicted RBP12.68□□□□□ -0.38
ZNF548-202ENST00000366197 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
ZNF548-202ENST00000366197 ZKSCAN1P17029 563 aaPredicted RBP12.68□□□□□ -0.38
ZNF548-202ENST00000366197 H3BQV1 296 aa12.68□□□□□ -0.38
ZNF548-202ENST00000366197 REC8O95072 547 aa12.68□□□□□ -0.38
ZNF548-202ENST00000366197 IFFO2Q5TF58 517 aa12.68□□□□□ -0.38
ZNF548-202ENST00000366197 NUTM2GQ5VZR2 741 aa12.68□□□□□ -0.38
ZNF548-202ENST00000366197 NCOA2Q15596 1464 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 CCDC7Q96M83 1385 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 VPS53Q5VIR6 699 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 ATP6V1DQ9Y5K8 247 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 FYCO1Q9BQS8 1478 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 PRDM2Q13029 1718 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 GOLGA6L3A6NEY3 463 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 PDE4AP27815 886 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 VPS37DQ86XT2 251 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 AMOTL1Q8IY63 956 aa12.67□□□□□ -0.38
ZNF548-202ENST00000366197 ROCK1Q13464 1354 aa12.66□□□□□ -0.38
ZNF548-202ENST00000366197 MTHFSP49914 203 aa12.66□□□□□ -0.38
ZNF548-202ENST00000366197 CREBRFQ8IUR6 639 aa12.66□□□□□ -0.38
ZNF548-202ENST00000366197 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
ZNF548-202ENST00000366197 FOXD4L5Q5VV16 416 aaPredicted RBP12.66□□□□□ -0.38
ZNF548-202ENST00000366197 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
ZNF548-202ENST00000366197 FOXD4L4Q8WXT5 416 aaPredicted RBP12.66□□□□□ -0.38
ZNF548-202ENST00000366197 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
ZNF548-202ENST00000366197 ARHGAP5Q13017 1502 aa12.65□□□□□ -0.38
ZNF548-202ENST00000366197 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.38
ZNF548-202ENST00000366197 PHF14O94880 888 aa12.65□□□□□ -0.38
ZNF548-202ENST00000366197 APPP05067 770 aa12.65□□□□□ -0.38
ZNF548-202ENST00000366197 THEMISQ8N1K5 641 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-202ENST00000366197 ABTB2Q8N961 1025 aa12.65□□□□□ -0.38
ZNF548-202ENST00000366197 POGZQ7Z3K3 1410 aa12.64□□□□□ -0.39
ZNF548-202ENST00000366197 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
ZNF548-202ENST00000366197 SLC52A1Q9NWF4 448 aa12.63□□□□□ -0.39
ZNF548-202ENST00000366197 KIF21BO75037 1637 aa12.63□□□□□ -0.39
ZNF548-202ENST00000366197 RRBP1Q9P2E9 1410 aaKnown RBP12.63□□□□□ -0.39
ZNF548-202ENST00000366197 TRDNQ13061 729 aa12.63□□□□□ -0.39
ZNF548-202ENST00000366197 ESCO1Q5FWF5 840 aa12.63□□□□□ -0.39
ZNF548-202ENST00000366197 SCAPERQ9BY12 1400 aa12.63□□□□□ -0.39
ZNF548-202ENST00000366197 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
ZNF548-202ENST00000366197 RNF20Q5VTR2 975 aa12.62□□□□□ -0.39
ZNF548-202ENST00000366197 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
ZNF548-202ENST00000366197 CPLX1O14810 134 aa12.62□□□□□ -0.39
ZNF548-202ENST00000366197 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
ZNF548-202ENST00000366197 PRAM1Q96QH2 718 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 KIAA0586Q9BVV6 1533 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 ANO2Q9NQ90 1003 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 HFM1A2PYH4 1435 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 MCTP1Q6DN14 999 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
ZNF548-202ENST00000366197 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
ZNF548-202ENST00000366197 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
ZNF548-202ENST00000366197 RAD21O60216 631 aa12.6□□□□□ -0.39
ZNF548-202ENST00000366197 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms