RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ATP6V1DQ9Y5K8 247 aa17.16■□□□□ 0.34
SMC5-201ENST00000361138 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
SMC5-201ENST00000361138 GPATCH3Q96I76 525 aa17.15■□□□□ 0.34
SMC5-201ENST00000361138 SOX12O15370 315 aa17.15■□□□□ 0.34
SMC5-201ENST00000361138 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
SMC5-201ENST00000361138 REC8O95072 547 aa17.15■□□□□ 0.34
SMC5-201ENST00000361138 GNL2Q13823 731 aaKnown RBP17.15■□□□□ 0.34
SMC5-201ENST00000361138 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
SMC5-201ENST00000361138 EFCAB2Q5VUJ9 269 aa17.15■□□□□ 0.34
SMC5-201ENST00000361138 OSCARQ8IYS5 282 aa17.15■□□□□ 0.34
SMC5-201ENST00000361138 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
SMC5-201ENST00000361138 GRPEL1Q9HAV7 217 aa17.14■□□□□ 0.33
SMC5-201ENST00000361138 EHBP1L1Q8N3D4 1523 aa17.14■□□□□ 0.33
SMC5-201ENST00000361138 HSP90B1P14625 803 aaKnown RBP17.14■□□□□ 0.33
SMC5-201ENST00000361138 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
SMC5-201ENST00000361138 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
SMC5-201ENST00000361138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMC5-201ENST00000361138 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■□□ 19.1
SMC5-201ENST00000361138 EFCAB5A4FU69 1503 aa17.13■□□□□ 0.33
SMC5-201ENST00000361138 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
SMC5-201ENST00000361138 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
SMC5-201ENST00000361138 CFTRP13569 1480 aa17.12■□□□□ 0.33
SMC5-201ENST00000361138 ZNF644Q9H582 1327 aaPredicted RBP17.12■□□□□ 0.33
SMC5-201ENST00000361138 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
SMC5-201ENST00000361138 PDE3AQ14432 1141 aa17.11■□□□□ 0.33
SMC5-201ENST00000361138 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
SMC5-201ENST00000361138 GGT6Q6P531 493 aa17.11■□□□□ 0.33
SMC5-201ENST00000361138 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
SMC5-201ENST00000361138 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
SMC5-201ENST00000361138 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
SMC5-201ENST00000361138 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
SMC5-201ENST00000361138 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
SMC5-201ENST00000361138 CYB5RLQ6IPT4 315 aa17.1■□□□□ 0.33
SMC5-201ENST00000361138 KIF3BO15066 747 aa17.09■□□□□ 0.33
SMC5-201ENST00000361138 GOLGA6L1Q8N7Z2 621 aa17.09■□□□□ 0.33
SMC5-201ENST00000361138 RBM10P98175 930 aaKnown RBP17.09■□□□□ 0.33
SMC5-201ENST00000361138 ELL2O00472 640 aaPredicted RBP17.08■□□□□ 0.33
SMC5-201ENST00000361138 CDC45O75419 566 aa17.08■□□□□ 0.33
SMC5-201ENST00000361138 ANKRD50Q9ULJ7 1429 aa17.08■□□□□ 0.33
SMC5-201ENST00000361138 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.33
SMC5-201ENST00000361138 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.32
SMC5-201ENST00000361138 BCAR3O75815 825 aa17.08■□□□□ 0.32
SMC5-201ENST00000361138 CAVIN1Q6NZI2 390 aaKnown RBP17.08■□□□□ 0.32
SMC5-201ENST00000361138 ZNF592Q92610 1267 aa17.08■□□□□ 0.32
SMC5-201ENST00000361138 MCM4P33991 863 aa17.06■□□□□ 0.32
SMC5-201ENST00000361138 KIAA1107Q9UPP5 1409 aa17.06■□□□□ 0.32
SMC5-201ENST00000361138 RIPK4P57078 832 aa17.05■□□□□ 0.32
SMC5-201ENST00000361138 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
SMC5-201ENST00000361138 UNC13AQ9UPW8 1703 aa17.05■□□□□ 0.32
SMC5-201ENST00000361138 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
SMC5-201ENST00000361138 UBE2Q2Q8WVN8 375 aa17.05■□□□□ 0.32
SMC5-201ENST00000361138 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
SMC5-201ENST00000361138 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
SMC5-201ENST00000361138 ESPNB1AK53 854 aa17.04■□□□□ 0.32
SMC5-201ENST00000361138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMC5-201ENST00000361138 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
SMC5-201ENST00000361138 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
SMC5-201ENST00000361138 NAIPQ13075 1403 aa17.03■□□□□ 0.32
SMC5-201ENST00000361138 H3BQV1 296 aa17.03■□□□□ 0.32
SMC5-201ENST00000361138 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
SMC5-201ENST00000361138 NUTM2DQ5VT03 806 aaPredicted RBP17.02■□□□□ 0.32
SMC5-201ENST00000361138 BECN2A8MW95 431 aa17.02■□□□□ 0.32
SMC5-201ENST00000361138 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.32
SMC5-201ENST00000361138 TSPY26PQ9H489 355 aa17.02■□□□□ 0.31
SMC5-201ENST00000361138 C11orf95C9JLR9 678 aaPredicted RBP17.02■□□□□ 0.31
SMC5-201ENST00000361138 RNF214Q8ND24 703 aa17.02■□□□□ 0.31
SMC5-201ENST00000361138 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
SMC5-201ENST00000361138 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
SMC5-201ENST00000361138 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
SMC5-201ENST00000361138 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
SMC5-201ENST00000361138 PTPRGP23470 1445 aa17■□□□□ 0.31
SMC5-201ENST00000361138 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
SMC5-201ENST00000361138 PRPF40AO75400 957 aaKnown RBP17■□□□□ 0.31
SMC5-201ENST00000361138 KIF3AQ9Y496 699 aa17■□□□□ 0.31
SMC5-201ENST00000361138 MAP3K1Q13233 1512 aa17■□□□□ 0.31
SMC5-201ENST00000361138 TPM3P06753 285 aa17■□□□□ 0.31
SMC5-201ENST00000361138 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
SMC5-201ENST00000361138 UQCRHLA0A096LP55 91 aa16.99■□□□□ 0.31
SMC5-201ENST00000361138 UQCRHP07919 91 aa16.99■□□□□ 0.31
SMC5-201ENST00000361138 MBD3O95983 291 aa16.99■□□□□ 0.31
SMC5-201ENST00000361138 TEX35Q5T0J7 233 aa16.99■□□□□ 0.31
SMC5-201ENST00000361138 SKAP1Q86WV1 359 aa16.99■□□□□ 0.31
SMC5-201ENST00000361138 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
SMC5-201ENST00000361138 A0A0G2JS52 829 aa16.99■□□□□ 0.31
SMC5-201ENST00000361138 LETM1O95202 739 aaPredicted RBP16.99■□□□□ 0.31
SMC5-201ENST00000361138 IFT57Q9NWB7 429 aa16.99■□□□□ 0.31
SMC5-201ENST00000361138 RABEP1Q15276 862 aa16.98■□□□□ 0.31
SMC5-201ENST00000361138 K7ELQ4 463 aaPredicted RBP16.98■□□□□ 0.31
SMC5-201ENST00000361138 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
SMC5-201ENST00000361138 SF3A1Q15459 793 aaKnown RBP16.97■□□□□ 0.31
SMC5-201ENST00000361138 TCP11L2Q8N4U5 519 aa16.97■□□□□ 0.31
SMC5-201ENST00000361138 HMGN5P82970 282 aaKnown RBP16.97■□□□□ 0.31
SMC5-201ENST00000361138 FAM184AQ8NB25 1140 aa16.97■□□□□ 0.31
SMC5-201ENST00000361138 CIZ1Q9ULV3 898 aaPredicted RBP16.97■□□□□ 0.31
SMC5-201ENST00000361138 LMOD2Q6P5Q4 547 aa16.96■□□□□ 0.31
SMC5-201ENST00000361138 ERBINQ96RT1 1412 aa16.96■□□□□ 0.31
SMC5-201ENST00000361138 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
SMC5-201ENST00000361138 SMC3Q9UQE7 1217 aa16.96■□□□□ 0.31
SMC5-201ENST00000361138 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.31
SMC5-201ENST00000361138 DAPK1P53355 1430 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms