RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 MYO5BQ9ULV0 1848 aa32.65■■■□□ 2.82
SDF4-202ENST00000360001 ADGRF5Q8IZF2 1346 aa32.64■■■□□ 2.82
SDF4-202ENST00000360001 NEXMIFQ5QGS0 1516 aa32.63■■■□□ 2.81
SDF4-202ENST00000360001 KIAA1210Q9ULL0 1709 aa32.62■■■□□ 2.81
SDF4-202ENST00000360001 C3P01024 1663 aa32.57■■■□□ 2.8
SDF4-202ENST00000360001 TNRQ92752 1358 aa32.56■■■□□ 2.8
SDF4-202ENST00000360001 PIK3C2GO75747 1445 aa32.54■■■□□ 2.8
SDF4-202ENST00000360001 WASHC2AQ641Q2 1341 aa32.53■■■□□ 2.8
SDF4-202ENST00000360001 A2ML1A8K2U0 1454 aa32.52■■■□□ 2.8
SDF4-202ENST00000360001 C11orf95C9JLR9 678 aaPredicted RBP32.52■■■□□ 2.8
SDF4-202ENST00000360001 ZFYVE9O95405 1425 aa32.51■■■□□ 2.79
SDF4-202ENST00000360001 CEBPAP49715 358 aaPredicted RBP32.5■■■□□ 2.79
SDF4-202ENST00000360001 DDX10Q13206 875 aaKnown RBP32.5■■■□□ 2.79
SDF4-202ENST00000360001 POLR1AO95602 1720 aaPredicted RBP32.5■■■□□ 2.79
SDF4-202ENST00000360001 CFAP70Q5T0N1 1121 aa32.5■■■□□ 2.79
SDF4-202ENST00000360001 STAG3Q9UJ98 1225 aa32.5■■■□□ 2.79
SDF4-202ENST00000360001 ST20-MTHFSA0A0A6YYL1 179 aa32.49■■■□□ 2.79
SDF4-202ENST00000360001 VGFO15240 615 aaPredicted RBP32.49■■■□□ 2.79
SDF4-202ENST00000360001 IQGAP1P46940 1657 aa32.49■■■□□ 2.79
SDF4-202ENST00000360001 CCDC7Q96M83 1385 aa32.46■■■□□ 2.79
SDF4-202ENST00000360001 NUTM2DQ5VT03 806 aaPredicted RBP32.46■■■□□ 2.79
SDF4-202ENST00000360001 ADAMTSL3P82987 1691 aa32.46■■■□□ 2.79
SDF4-202ENST00000360001 KDM5AP29375 1690 aaKnown RBP32.44■■■□□ 2.78
SDF4-202ENST00000360001 C14orf93Q9H972 538 aaKnown RBP32.43■■■□□ 2.78
SDF4-202ENST00000360001 RIMS1Q86UR5 1692 aaKnown RBP32.43■■■□□ 2.78
SDF4-202ENST00000360001 SETBP1Q9Y6X0 1596 aa32.43■■■□□ 2.78
SDF4-202ENST00000360001 SCAF11Q99590 1463 aaKnown RBP32.43■■■□□ 2.78
SDF4-202ENST00000360001 NLRP1Q9C000 1473 aa32.42■■■□□ 2.78
SDF4-202ENST00000360001 KIF7Q2M1P5 1343 aa32.41■■■□□ 2.78
SDF4-202ENST00000360001 UBR1Q8IWV7 1749 aa32.4■■■□□ 2.78
SDF4-202ENST00000360001 RIMS2Q9UQ26 1411 aa32.38■■■□□ 2.77
SDF4-202ENST00000360001 ADGRB1O14514 1584 aa32.38■■■□□ 2.77
SDF4-202ENST00000360001 MIER1Q8N108 512 aa32.37■■■□□ 2.77
SDF4-202ENST00000360001 PLPPR3Q6T4P5 718 aa32.34■■■□□ 2.77
SDF4-202ENST00000360001 TESK2Q96S53 571 aa32.34■■■□□ 2.77
SDF4-202ENST00000360001 EIF3AQ14152 1382 aaKnown RBP32.3■■■□□ 2.76
SDF4-202ENST00000360001 MYO3AQ8NEV4 1616 aa32.29■■■□□ 2.76
SDF4-202ENST00000360001 TMEM2Q9UHN6 1383 aa32.28■■■□□ 2.76
SDF4-202ENST00000360001 TMEM132EQ6IEE7 984 aa32.27■■■□□ 2.76
SDF4-202ENST00000360001 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.27■■■□□ 2.76
SDF4-202ENST00000360001 ASXL1Q8IXJ9 1541 aa32.25■■■□□ 2.75
SDF4-202ENST00000360001 ALKQ9UM73 1620 aa32.25■■■□□ 2.75
SDF4-202ENST00000360001 SENP3Q9H4L4 574 aaPredicted RBP32.22■■■□□ 2.75
SDF4-202ENST00000360001 DISP3Q9P2K9 1392 aa32.22■■■□□ 2.75
SDF4-202ENST00000360001 HDGFP51858 240 aaKnown RBP32.21■■■□□ 2.75
SDF4-202ENST00000360001 NRXN3Q9Y4C0 1643 aa32.2■■■□□ 2.75
SDF4-202ENST00000360001 POLR3GLQ9BT43 218 aa32.19■■■□□ 2.74
SDF4-202ENST00000360001 TRAK1Q9UPV9 953 aa32.19■■■□□ 2.74
SDF4-202ENST00000360001 SETD1AO15047 1707 aaKnown RBP32.18■■■□□ 2.74
SDF4-202ENST00000360001 TMF1P82094 1093 aa32.18■■■□□ 2.74
SDF4-202ENST00000360001 SLIT1O75093 1534 aa32.17■■■□□ 2.74
SDF4-202ENST00000360001 PTPRMP28827 1452 aa32.17■■■□□ 2.74
SDF4-202ENST00000360001 ARHGAP23Q9P227 1491 aa32.17■■■□□ 2.74
SDF4-202ENST00000360001 CEP170BQ9Y4F5 1589 aaPredicted RBP32.16■■■□□ 2.74
SDF4-202ENST00000360001 ARHGEF28Q8N1W1 1705 aaKnown RBP32.15■■■□□ 2.74
SDF4-202ENST00000360001 SBNO2Q9Y2G9 1366 aa32.13■■■□□ 2.73
SDF4-202ENST00000360001 THEMISQ8N1K5 641 aaPredicted RBP32.12■■■□□ 2.73
SDF4-202ENST00000360001 CENPJQ9HC77 1338 aaPredicted RBP32.12■■■□□ 2.73
SDF4-202ENST00000360001 LTKP29376 864 aa32.12■■■□□ 2.73
SDF4-202ENST00000360001 SETD1BQ9UPS6 1966 aaKnown RBP32.12■■■□□ 2.73
SDF4-202ENST00000360001 YTHDC2Q9H6S0 1430 aaKnown RBP32.11■■■□□ 2.73
SDF4-202ENST00000360001 ZNF142P52746 1687 aaPredicted RBP32.11■■■□□ 2.73
SDF4-202ENST00000360001 QRICH2Q9H0J4 1663 aa32.1■■■□□ 2.73
SDF4-202ENST00000360001 PLEKHG1Q9ULL1 1385 aa32.08■■■□□ 2.73
SDF4-202ENST00000360001 ANP32CO43423 234 aa32.07■■■□□ 2.72
SDF4-202ENST00000360001 SLC24A1O60721 1099 aa32.07■■■□□ 2.72
SDF4-202ENST00000360001 TXNDC2Q86VQ3 553 aa32.07■■■□□ 2.72
SDF4-202ENST00000360001 EID1Q9Y6B2 187 aa32.06■■■□□ 2.72
SDF4-202ENST00000360001 STK26Q9P289 416 aa32.05■■■□□ 2.72
SDF4-202ENST00000360001 ADAMTS13Q76LX8 1427 aa32.03■■■□□ 2.72
SDF4-202ENST00000360001 CDCA8Q53HL2 280 aa32.03■■■□□ 2.72
SDF4-202ENST00000360001 METP08581 1390 aa32.02■■■□□ 2.72
SDF4-202ENST00000360001 LRPPRCP42704 1394 aaKnown RBP32.01■■■□□ 2.72
SDF4-202ENST00000360001 BCANQ96GW7 911 aa31.99■■■□□ 2.71
SDF4-202ENST00000360001 DLC1Q96QB1 1528 aa31.98■■■□□ 2.71
SDF4-202ENST00000360001 MED14O60244 1454 aa31.98■■■□□ 2.71
SDF4-202ENST00000360001 ABCC11Q96J66 1382 aa31.97■■■□□ 2.71
SDF4-202ENST00000360001 MYOM1P52179 1685 aa31.94■■■□□ 2.7
SDF4-202ENST00000360001 PRAM1Q96QH2 718 aa31.94■■■□□ 2.7
SDF4-202ENST00000360001 KNDC1Q76NI1 1749 aa31.92■■■□□ 2.7
SDF4-202ENST00000360001 TULP4Q9NRJ4 1543 aa31.91■■■□□ 2.7
SDF4-202ENST00000360001 TECPR2O15040 1411 aa31.9■■■□□ 2.7
SDF4-202ENST00000360001 SAFB2Q14151 953 aaKnown RBP eCLIP31.9■■■□□ 2.7
SDF4-202ENST00000360001 POGKQ9P215 609 aa31.89■■■□□ 2.7
SDF4-202ENST00000360001 PRKRIP1Q9H875 184 aaPredicted RBP31.88■■■□□ 2.69
SDF4-202ENST00000360001 DIP2AQ14689 1571 aa31.88■■■□□ 2.69
SDF4-202ENST00000360001 SLC26A8Q96RN1 970 aa31.88■■■□□ 2.69
SDF4-202ENST00000360001 CCER2I3L3R5 266 aa31.87■■■□□ 2.69
SDF4-202ENST00000360001 PANK3Q9H999 370 aa31.87■■■□□ 2.69
SDF4-202ENST00000360001 TBX22Q9Y458 520 aa31.87■■■□□ 2.69
SDF4-202ENST00000360001 CPS1P31327 1500 aa31.86■■■□□ 2.69
SDF4-202ENST00000360001 EVC2Q86UK5 1308 aa31.86■■■□□ 2.69
SDF4-202ENST00000360001 PER1O15534 1290 aaPredicted RBP31.85■■■□□ 2.69
SDF4-202ENST00000360001 ANKLE2Q86XL3 938 aa31.85■■■□□ 2.69
SDF4-202ENST00000360001 PLEKHH1Q9ULM0 1364 aa31.84■■■□□ 2.69
SDF4-202ENST00000360001 WAPLQ7Z5K2 1190 aa31.83■■■□□ 2.69
SDF4-202ENST00000360001 SIRT1Q96EB6 747 aa31.83■■■□□ 2.69
SDF4-202ENST00000360001 KDM4FA0A1W2PPD8 638 aa31.83■■■□□ 2.69
SDF4-202ENST00000360001 FAM135BQ49AJ0 1406 aa31.83■■■□□ 2.69
SDF4-202ENST00000360001 PUS7Q96PZ0 661 aaKnown RBP31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms