RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 KIAA1210Q9ULL0 1709 aa35.38■■■■□ 3.25
SHARPIN-201ENST00000359551 MYO3AQ8NEV4 1616 aa35.35■■■■□ 3.25
SHARPIN-201ENST00000359551 ZFYVE9O95405 1425 aa35.34■■■■□ 3.25
SHARPIN-201ENST00000359551 LAMC1P11047 1609 aa35.33■■■■□ 3.25
SHARPIN-201ENST00000359551 ZNF316A6NFI3 1004 aaPredicted RBP35.32■■■■□ 3.24
SHARPIN-201ENST00000359551 SETD1BQ9UPS6 1966 aaKnown RBP35.31■■■■□ 3.24
SHARPIN-201ENST00000359551 STAG3Q9UJ98 1225 aa35.31■■■■□ 3.24
SHARPIN-201ENST00000359551 ADGRF5Q8IZF2 1346 aa35.31■■■■□ 3.24
SHARPIN-201ENST00000359551 PTPRMP28827 1452 aa35.3■■■■□ 3.24
SHARPIN-201ENST00000359551 GPRASP1Q5JY77 1395 aa35.3■■■■□ 3.24
SHARPIN-201ENST00000359551 PIK3C2GO75747 1445 aa35.27■■■■□ 3.24
SHARPIN-201ENST00000359551 VGFO15240 615 aaPredicted RBP35.26■■■■□ 3.23
SHARPIN-201ENST00000359551 ROCK2O75116 1388 aaKnown RBP35.24■■■■□ 3.23
SHARPIN-201ENST00000359551 ZNF142P52746 1687 aaPredicted RBP35.24■■■■□ 3.23
SHARPIN-201ENST00000359551 PLPPR3Q6T4P5 718 aa35.24■■■■□ 3.23
SHARPIN-201ENST00000359551 RIMS2Q9UQ26 1411 aa35.22■■■■□ 3.23
SHARPIN-201ENST00000359551 CEP170BQ9Y4F5 1589 aaPredicted RBP35.21■■■■□ 3.23
SHARPIN-201ENST00000359551 EIF4G2P78344 907 aaKnown RBP eCLIP35.21■■■■□ 3.23
SHARPIN-201ENST00000359551 NBPF1Q3BBV0 1214 aa35.2■■■■□ 3.23
SHARPIN-201ENST00000359551 CARD11Q9BXL7 1154 aa35.18■■■■□ 3.22
SHARPIN-201ENST00000359551 SETBP1Q9Y6X0 1596 aa35.17■■■■□ 3.22
SHARPIN-201ENST00000359551 TMEM2Q9UHN6 1383 aa35.17■■■■□ 3.22
SHARPIN-201ENST00000359551 SLIT1O75093 1534 aa35.16■■■■□ 3.22
SHARPIN-201ENST00000359551 HSPA5P11021 654 aaKnown RBP35.15■■■■□ 3.22
SHARPIN-201ENST00000359551 USP47Q96K76 1375 aa35.15■■■■□ 3.22
SHARPIN-201ENST00000359551 IQGAP1P46940 1657 aa35.15■■■■□ 3.22
SHARPIN-201ENST00000359551 ARHGAP23Q9P227 1491 aa35.14■■■■□ 3.22
SHARPIN-201ENST00000359551 NUTM2DQ5VT03 806 aaPredicted RBP35.13■■■■□ 3.21
SHARPIN-201ENST00000359551 C14orf93Q9H972 538 aaKnown RBP35.13■■■■□ 3.21
SHARPIN-201ENST00000359551 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.12■■■■□ 3.21
SHARPIN-201ENST00000359551 CFAP70Q5T0N1 1121 aa35.11■■■■□ 3.21
SHARPIN-201ENST00000359551 HDGFP51858 240 aaKnown RBP35.09■■■■□ 3.21
SHARPIN-201ENST00000359551 ADGRB1O14514 1584 aa35.09■■■■□ 3.21
SHARPIN-201ENST00000359551 THEMISQ8N1K5 641 aaPredicted RBP35.07■■■■□ 3.2
SHARPIN-201ENST00000359551 KDM4FA0A1W2PPD8 638 aa35.06■■■■□ 3.2
SHARPIN-201ENST00000359551 NRXN3Q9Y4C0 1643 aa35.06■■■■□ 3.2
SHARPIN-201ENST00000359551 HIRIP3Q9BW71 556 aaPredicted RBP35.05■■■■□ 3.2
SHARPIN-201ENST00000359551 SETD1AO15047 1707 aaKnown RBP35.05■■■■□ 3.2
SHARPIN-201ENST00000359551 ALKQ9UM73 1620 aa35.04■■■■□ 3.2
SHARPIN-201ENST00000359551 SCAF11Q99590 1463 aaKnown RBP35.04■■■■□ 3.2
SHARPIN-201ENST00000359551 POLR1AO95602 1720 aaPredicted RBP35.01■■■■□ 3.2
SHARPIN-201ENST00000359551 ASXL1Q8IXJ9 1541 aa35■■■■□ 3.19
SHARPIN-201ENST00000359551 LTKP29376 864 aa34.96■■■■□ 3.19
SHARPIN-201ENST00000359551 PLEKHG1Q9ULL1 1385 aa34.96■■■■□ 3.19
SHARPIN-201ENST00000359551 EID1Q9Y6B2 187 aa34.94■■■■□ 3.18
SHARPIN-201ENST00000359551 ST20-MTHFSA0A0A6YYL1 179 aa34.93■■■■□ 3.18
SHARPIN-201ENST00000359551 TXNDC2Q86VQ3 553 aa34.93■■■■□ 3.18
SHARPIN-201ENST00000359551 EIF3AQ14152 1382 aaKnown RBP34.9■■■■□ 3.18
SHARPIN-201ENST00000359551 AEBP2Q6ZN18 517 aaPredicted RBP34.9■■■■□ 3.18
SHARPIN-201ENST00000359551 TMEM132EQ6IEE7 984 aa34.89■■■■□ 3.18
SHARPIN-201ENST00000359551 ARHGEF28Q8N1W1 1705 aaKnown RBP34.88■■■■□ 3.17
SHARPIN-201ENST00000359551 ADAMTS13Q76LX8 1427 aa34.88■■■■□ 3.17
SHARPIN-201ENST00000359551 MED14O60244 1454 aa34.87■■■■□ 3.17
SHARPIN-201ENST00000359551 YTHDC2Q9H6S0 1430 aaKnown RBP34.83■■■■□ 3.17
SHARPIN-201ENST00000359551 DIP2AQ14689 1571 aa34.83■■■■□ 3.17
SHARPIN-201ENST00000359551 TESK2Q96S53 571 aa34.82■■■■□ 3.17
SHARPIN-201ENST00000359551 C11orf95C9JLR9 678 aaPredicted RBP34.82■■■■□ 3.16
SHARPIN-201ENST00000359551 SENP3Q9H4L4 574 aaPredicted RBP34.82■■■■□ 3.16
SHARPIN-201ENST00000359551 WASHC2AQ641Q2 1341 aa34.81■■■■□ 3.16
SHARPIN-201ENST00000359551 CCDC7Q96M83 1385 aa34.8■■■■□ 3.16
SHARPIN-201ENST00000359551 KNDC1Q76NI1 1749 aa34.79■■■■□ 3.16
SHARPIN-201ENST00000359551 ANKLE2Q86XL3 938 aa34.79■■■■□ 3.16
SHARPIN-201ENST00000359551 TRAK1Q9UPV9 953 aa34.77■■■■□ 3.16
SHARPIN-201ENST00000359551 QRICH2Q9H0J4 1663 aa34.77■■■■□ 3.16
SHARPIN-201ENST00000359551 METP08581 1390 aa34.77■■■■□ 3.16
SHARPIN-201ENST00000359551 LRPPRCP42704 1394 aaKnown RBP34.77■■■■□ 3.16
SHARPIN-201ENST00000359551 DLC1Q96QB1 1528 aa34.77■■■■□ 3.16
SHARPIN-201ENST00000359551 SBNO2Q9Y2G9 1366 aa34.76■■■■□ 3.16
SHARPIN-201ENST00000359551 KIF7Q2M1P5 1343 aa34.75■■■■□ 3.15
SHARPIN-201ENST00000359551 BCANQ96GW7 911 aa34.74■■■■□ 3.15
SHARPIN-201ENST00000359551 DIEXFQ68CQ4 756 aaKnown RBP34.73■■■■□ 3.15
SHARPIN-201ENST00000359551 TBX22Q9Y458 520 aa34.73■■■■□ 3.15
SHARPIN-201ENST00000359551 ABCC11Q96J66 1382 aa34.72■■■■□ 3.15
SHARPIN-201ENST00000359551 CENPJQ9HC77 1338 aaPredicted RBP34.72■■■■□ 3.15
SHARPIN-201ENST00000359551 TECPR2O15040 1411 aa34.71■■■■□ 3.15
SHARPIN-201ENST00000359551 LMTK3Q96Q04 1460 aa34.7■■■■□ 3.14
SHARPIN-201ENST00000359551 SLC24A1O60721 1099 aa34.69■■■■□ 3.14
SHARPIN-201ENST00000359551 CPS1P31327 1500 aa34.68■■■■□ 3.14
SHARPIN-201ENST00000359551 STK26Q9P289 416 aa34.67■■■■□ 3.14
SHARPIN-201ENST00000359551 DISP3Q9P2K9 1392 aa34.67■■■■□ 3.14
SHARPIN-201ENST00000359551 TMF1P82094 1093 aa34.66■■■■□ 3.14
SHARPIN-201ENST00000359551 SLC26A8Q96RN1 970 aa34.66■■■■□ 3.14
SHARPIN-201ENST00000359551 NPHP4O75161 1426 aaPredicted RBP34.65■■■■□ 3.14
SHARPIN-201ENST00000359551 DDX10Q13206 875 aaKnown RBP34.64■■■■□ 3.14
SHARPIN-201ENST00000359551 PIK3R4Q99570 1358 aa34.63■■■■□ 3.13
SHARPIN-201ENST00000359551 SIRT1Q96EB6 747 aa34.62■■■■□ 3.13
SHARPIN-201ENST00000359551 PTPRUQ92729 1446 aa34.61■■■■□ 3.13
SHARPIN-201ENST00000359551 XRN1Q8IZH2 1706 aaKnown RBP34.61■■■■□ 3.13
SHARPIN-201ENST00000359551 FAM135BQ49AJ0 1406 aa34.61■■■■□ 3.13
SHARPIN-201ENST00000359551 CHD2O14647 1828 aaKnown RBP34.58■■■■□ 3.13
SHARPIN-201ENST00000359551 PRAM1Q96QH2 718 aa34.57■■■■□ 3.13
SHARPIN-201ENST00000359551 NCKAP5LQ9HCH0 1330 aa34.57■■■■□ 3.13
SHARPIN-201ENST00000359551 CDCA8Q53HL2 280 aa34.55■■■■□ 3.12
SHARPIN-201ENST00000359551 TULP4Q9NRJ4 1543 aa34.53■■■■□ 3.12
SHARPIN-201ENST00000359551 PTCH1Q13635 1447 aa34.52■■■■□ 3.12
SHARPIN-201ENST00000359551 POGKQ9P215 609 aa34.52■■■■□ 3.12
SHARPIN-201ENST00000359551 STRCQ7RTU9 1775 aa34.51■■■■□ 3.11
SHARPIN-201ENST00000359551 HSPA2P54652 639 aa34.5■■■■□ 3.11
SHARPIN-201ENST00000359551 ROBO2Q9HCK4 1378 aa34.5■■■■□ 3.11
SHARPIN-201ENST00000359551 PLEKHH1Q9ULM0 1364 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms