RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 SIGLEC1Q9BZZ2 1709 aa20.43■□□□□ 0.86
GABPB1-202ENST00000359031 MROH2AA6NES4 1674 aa20.42■□□□□ 0.86
GABPB1-202ENST00000359031 HNRNPUQ00839 825 aaKnown RBP eCLIP20.42■□□□□ 0.86
GABPB1-202ENST00000359031 ZC3H13Q5T200 1668 aaKnown RBP20.4■□□□□ 0.86
GABPB1-202ENST00000359031 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
GABPB1-202ENST00000359031 CAMSAP1Q5T5Y3 1602 aa20.4■□□□□ 0.86
GABPB1-202ENST00000359031 UGGT1Q9NYU2 1555 aa20.4■□□□□ 0.86
GABPB1-202ENST00000359031 ABCC3O15438 1527 aa20.39■□□□□ 0.86
GABPB1-202ENST00000359031 ADGRB3O60242 1522 aa20.39■□□□□ 0.86
GABPB1-202ENST00000359031 SCAF11Q99590 1463 aaKnown RBP20.37■□□□□ 0.85
GABPB1-202ENST00000359031 TESK2Q96S53 571 aa20.37■□□□□ 0.85
GABPB1-202ENST00000359031 NPATQ14207 1427 aa20.34■□□□□ 0.85
GABPB1-202ENST00000359031 DISP3Q9P2K9 1392 aa20.34■□□□□ 0.85
GABPB1-202ENST00000359031 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
GABPB1-202ENST00000359031 NRXN1Q9ULB1 1477 aa20.33■□□□□ 0.85
GABPB1-202ENST00000359031 TMF1P82094 1093 aa20.33■□□□□ 0.84
GABPB1-202ENST00000359031 PPLO60437 1756 aa20.32■□□□□ 0.84
GABPB1-202ENST00000359031 RALBP1Q15311 655 aa20.32■□□□□ 0.84
GABPB1-202ENST00000359031 PELP1Q8IZL8 1130 aaKnown RBP20.32■□□□□ 0.84
GABPB1-202ENST00000359031 EIF3AQ14152 1382 aaKnown RBP20.32■□□□□ 0.84
GABPB1-202ENST00000359031 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
GABPB1-202ENST00000359031 CEBPAP49715 358 aaPredicted RBP20.31■□□□□ 0.84
GABPB1-202ENST00000359031 NEFLP07196 543 aa20.31■□□□□ 0.84
GABPB1-202ENST00000359031 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
GABPB1-202ENST00000359031 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
GABPB1-202ENST00000359031 SYNMO15061 1565 aa20.29■□□□□ 0.84
GABPB1-202ENST00000359031 BRD4O60885 1362 aaPredicted RBP20.29■□□□□ 0.84
GABPB1-202ENST00000359031 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
GABPB1-202ENST00000359031 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
GABPB1-202ENST00000359031 MYBBP1AQ9BQG0 1328 aaKnown RBP20.29■□□□□ 0.84
GABPB1-202ENST00000359031 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
GABPB1-202ENST00000359031 WASHC2CQ9Y4E1 1318 aa20.28■□□□□ 0.84
GABPB1-202ENST00000359031 PARD3Q8TEW0 1356 aa20.28■□□□□ 0.84
GABPB1-202ENST00000359031 NOS1P29475 1434 aa20.27■□□□□ 0.84
GABPB1-202ENST00000359031 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
GABPB1-202ENST00000359031 KDM5AP29375 1690 aaKnown RBP20.26■□□□□ 0.83
GABPB1-202ENST00000359031 GGT6Q6P531 493 aa20.25■□□□□ 0.83
GABPB1-202ENST00000359031 REREQ9P2R6 1566 aa20.24■□□□□ 0.83
GABPB1-202ENST00000359031 MYOM1P52179 1685 aa20.24■□□□□ 0.83
GABPB1-202ENST00000359031 FKBP8Q14318 412 aa20.24■□□□□ 0.83
GABPB1-202ENST00000359031 CDCA8Q53HL2 280 aa20.24■□□□□ 0.83
GABPB1-202ENST00000359031 CFAP65Q6ZU64 1925 aaKnown RBP20.23■□□□□ 0.83
GABPB1-202ENST00000359031 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
GABPB1-202ENST00000359031 ESF1Q9H501 851 aaKnown RBP20.22■□□□□ 0.83
GABPB1-202ENST00000359031 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
GABPB1-202ENST00000359031 LRPPRCP42704 1394 aaKnown RBP20.21■□□□□ 0.83
GABPB1-202ENST00000359031 SLC24A1O60721 1099 aa20.2■□□□□ 0.82
GABPB1-202ENST00000359031 PIK3C2GO75747 1445 aa20.2■□□□□ 0.82
GABPB1-202ENST00000359031 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
GABPB1-202ENST00000359031 ADGRF5Q8IZF2 1346 aa20.2■□□□□ 0.82
GABPB1-202ENST00000359031 PNISRQ8TF01 805 aaKnown RBP20.2■□□□□ 0.82
GABPB1-202ENST00000359031 STRCQ7RTU9 1775 aa20.19■□□□□ 0.82
GABPB1-202ENST00000359031 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
GABPB1-202ENST00000359031 ILDR2Q71H61 639 aa20.18■□□□□ 0.82
GABPB1-202ENST00000359031 NLRP13Q86W25 1043 aa20.18■□□□□ 0.82
GABPB1-202ENST00000359031 SBNO2Q9Y2G9 1366 aa20.17■□□□□ 0.82
GABPB1-202ENST00000359031 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
GABPB1-202ENST00000359031 PANK3Q9H999 370 aa20.16■□□□□ 0.82
GABPB1-202ENST00000359031 AGLP35573 1532 aa20.16■□□□□ 0.82
GABPB1-202ENST00000359031 CFAP70Q5T0N1 1121 aa20.16■□□□□ 0.82
GABPB1-202ENST00000359031 SOCS7O14512 581 aa20.15■□□□□ 0.82
GABPB1-202ENST00000359031 ADGRB1O14514 1584 aa20.15■□□□□ 0.82
GABPB1-202ENST00000359031 ERVK-7P63135 1459 aa20.14■□□□□ 0.81
GABPB1-202ENST00000359031 SPATA31D1Q6ZQQ2 1576 aa20.13■□□□□ 0.81
GABPB1-202ENST00000359031 SMG6Q86US8 1419 aaKnown RBP20.13■□□□□ 0.81
GABPB1-202ENST00000359031 C3P01024 1663 aa20.13■□□□□ 0.81
GABPB1-202ENST00000359031 INSRP06213 1382 aa20.13■□□□□ 0.81
GABPB1-202ENST00000359031 QRICH2Q9H0J4 1663 aa20.13■□□□□ 0.81
GABPB1-202ENST00000359031 CHGAP10645 457 aaKnown RBP20.12■□□□□ 0.81
GABPB1-202ENST00000359031 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
GABPB1-202ENST00000359031 SETD1BQ9UPS6 1966 aaKnown RBP20.09■□□□□ 0.81
GABPB1-202ENST00000359031 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
GABPB1-202ENST00000359031 NPC1L1Q9UHC9 1359 aa20.09■□□□□ 0.81
GABPB1-202ENST00000359031 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
GABPB1-202ENST00000359031 C14orf93Q9H972 538 aaKnown RBP20.09■□□□□ 0.81
GABPB1-202ENST00000359031 MYO5BQ9ULV0 1848 aa20.08■□□□□ 0.81
GABPB1-202ENST00000359031 BCANQ96GW7 911 aa20.08■□□□□ 0.8
GABPB1-202ENST00000359031 ZFYVE9O95405 1425 aa20.08■□□□□ 0.8
GABPB1-202ENST00000359031 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
GABPB1-202ENST00000359031 SLC52A1Q9NWF4 448 aa20.07■□□□□ 0.8
GABPB1-202ENST00000359031 CC2D1BQ5T0F9 858 aaKnown RBP20.06■□□□□ 0.8
GABPB1-202ENST00000359031 KNSTRNQ9Y448 316 aa20.05■□□□□ 0.8
GABPB1-202ENST00000359031 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
GABPB1-202ENST00000359031 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
GABPB1-202ENST00000359031 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
GABPB1-202ENST00000359031 NUDCQ9Y266 331 aa20.04■□□□□ 0.8
GABPB1-202ENST00000359031 CLTCQ00610 1675 aaKnown RBP20.04■□□□□ 0.8
GABPB1-202ENST00000359031 LTBP4Q8N2S1 1624 aa20.03■□□□□ 0.8
GABPB1-202ENST00000359031 VGFO15240 615 aaPredicted RBP20.03■□□□□ 0.8
GABPB1-202ENST00000359031 AMER1Q5JTC6 1135 aaPredicted RBP20.02■□□□□ 0.8
GABPB1-202ENST00000359031 IQSEC2Q5JU85 1478 aa20.02■□□□□ 0.8
GABPB1-202ENST00000359031 IDI1Q13907 227 aa19.99■□□□□ 0.79
GABPB1-202ENST00000359031 USP32Q8NFA0 1604 aa19.98■□□□□ 0.79
GABPB1-202ENST00000359031 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
GABPB1-202ENST00000359031 TRAK1Q9UPV9 953 aa19.95■□□□□ 0.78
GABPB1-202ENST00000359031 ZMYM3Q14202 1370 aa19.95■□□□□ 0.78
GABPB1-202ENST00000359031 NCKAP5LQ9HCH0 1330 aa19.95■□□□□ 0.78
GABPB1-202ENST00000359031 UBAP1LF5GYI3 381 aa19.94■□□□□ 0.78
GABPB1-202ENST00000359031 RNF123Q5XPI4 1314 aa19.93■□□□□ 0.78
GABPB1-202ENST00000359031 ZNF335Q9H4Z2 1342 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms