RNA–Protein interactions for RNA: ENST00000358907.6

R3HDM2-202, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene R3HDM2, Length 3,974 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-202ENST00000358907 UBE2Q2Q8WVN8 375 aa13.27□□□□□ -0.28
R3HDM2-202ENST00000358907 HSP90AA2PQ14568 343 aaPredicted RBP13.27□□□□□ -0.29
R3HDM2-202ENST00000358907 GOLGA6L22H0YM25 854 aa13.27□□□□□ -0.29
R3HDM2-202ENST00000358907 SEC24BO95487 1268 aa13.27□□□□□ -0.29
R3HDM2-202ENST00000358907 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
R3HDM2-202ENST00000358907 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
R3HDM2-202ENST00000358907 CHMP5Q9NZZ3 219 aa13.26□□□□□ -0.29
R3HDM2-202ENST00000358907 SMC4Q9NTJ3 1288 aa13.25□□□□□ -0.29
R3HDM2-202ENST00000358907 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
R3HDM2-202ENST00000358907 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
R3HDM2-202ENST00000358907 PRAG1Q86YV5 1406 aa13.24□□□□□ -0.29
R3HDM2-202ENST00000358907 TRAK2O60296 914 aa13.24□□□□□ -0.29
R3HDM2-202ENST00000358907 MBD5Q9P267 1494 aa13.24□□□□□ -0.29
R3HDM2-202ENST00000358907 ARHGEF12Q9NZN5 1544 aa13.24□□□□□ -0.29
R3HDM2-202ENST00000358907 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
R3HDM2-202ENST00000358907 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
R3HDM2-202ENST00000358907 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
R3HDM2-202ENST00000358907 MCM4P33991 863 aa13.23□□□□□ -0.29
R3HDM2-202ENST00000358907 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
R3HDM2-202ENST00000358907 GBP4Q96PP9 640 aa13.23□□□□□ -0.29
R3HDM2-202ENST00000358907 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
R3HDM2-202ENST00000358907 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
R3HDM2-202ENST00000358907 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
R3HDM2-202ENST00000358907 ZKSCAN2Q63HK3 967 aa13.22□□□□□ -0.29
R3HDM2-202ENST00000358907 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
R3HDM2-202ENST00000358907 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.29
R3HDM2-202ENST00000358907 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.29
R3HDM2-202ENST00000358907 MRE11P49959 708 aa13.2□□□□□ -0.3
R3HDM2-202ENST00000358907 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
R3HDM2-202ENST00000358907 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
R3HDM2-202ENST00000358907 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
R3HDM2-202ENST00000358907 DZIP1LQ8IYY4 767 aaKnown RBP13.2□□□□□ -0.3
R3HDM2-202ENST00000358907 POLR1AO95602 1720 aaPredicted RBP13.19□□□□□ -0.3
R3HDM2-202ENST00000358907 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
R3HDM2-202ENST00000358907 CFAP70Q5T0N1 1121 aa13.19□□□□□ -0.3
R3HDM2-202ENST00000358907 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
R3HDM2-202ENST00000358907 PANK2Q9BZ23 570 aa13.19□□□□□ -0.3
R3HDM2-202ENST00000358907 RRAGDQ9NQL2 400 aaPredicted RBP13.19□□□□□ -0.3
R3HDM2-202ENST00000358907 PTPRGP23470 1445 aa13.18□□□□□ -0.3
R3HDM2-202ENST00000358907 COL17A1Q9UMD9 1497 aaPredicted RBP13.18□□□□□ -0.3
R3HDM2-202ENST00000358907 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
R3HDM2-202ENST00000358907 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
R3HDM2-202ENST00000358907 ZNF608Q9ULD9 1512 aaPredicted RBP13.18□□□□□ -0.3
R3HDM2-202ENST00000358907 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
R3HDM2-202ENST00000358907 MSNP26038 577 aaKnown RBP13.18□□□□□ -0.3
R3HDM2-202ENST00000358907 KIF3BO15066 747 aa13.17□□□□□ -0.3
R3HDM2-202ENST00000358907 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
R3HDM2-202ENST00000358907 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
R3HDM2-202ENST00000358907 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
R3HDM2-202ENST00000358907 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
R3HDM2-202ENST00000358907 ITSN2Q9NZM3 1697 aa13.17□□□□□ -0.3
R3HDM2-202ENST00000358907 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
R3HDM2-202ENST00000358907 LNPKQ9C0E8 428 aa13.16□□□□□ -0.3
R3HDM2-202ENST00000358907 SPAG9O60271 1321 aaKnown RBP13.16□□□□□ -0.3
R3HDM2-202ENST00000358907 MTHFSP49914 203 aa13.16□□□□□ -0.3
R3HDM2-202ENST00000358907 AAMPQ13685 434 aa13.16□□□□□ -0.3
R3HDM2-202ENST00000358907 TNNQ9UQP3 1299 aa13.16□□□□□ -0.3
R3HDM2-202ENST00000358907 KANK1Q14678 1352 aa13.16□□□□□ -0.3
R3HDM2-202ENST00000358907 KIAA0556O60303 1618 aa13.15□□□□□ -0.3
R3HDM2-202ENST00000358907 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
R3HDM2-202ENST00000358907 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
R3HDM2-202ENST00000358907 IPO8O15397 1037 aaKnown RBP13.15□□□□□ -0.3
R3HDM2-202ENST00000358907 GRPEL1Q9HAV7 217 aa13.15□□□□□ -0.3
R3HDM2-202ENST00000358907 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
R3HDM2-202ENST00000358907 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
R3HDM2-202ENST00000358907 GRIN2AQ12879 1464 aa13.14□□□□□ -0.31
R3HDM2-202ENST00000358907 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
R3HDM2-202ENST00000358907 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
R3HDM2-202ENST00000358907 DDX49Q9Y6V7 483 aaKnown RBP13.13□□□□□ -0.31
R3HDM2-202ENST00000358907 ADAMTS12P58397 1594 aa13.13□□□□□ -0.31
R3HDM2-202ENST00000358907 ESPNB1AK53 854 aa13.13□□□□□ -0.31
R3HDM2-202ENST00000358907 MVPQ14764 893 aaKnown RBP13.13□□□□□ -0.31
R3HDM2-202ENST00000358907 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
R3HDM2-202ENST00000358907 INSRP06213 1382 aa13.13□□□□□ -0.31
R3HDM2-202ENST00000358907 RLBP1P12271 317 aa13.13□□□□□ -0.31
R3HDM2-202ENST00000358907 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
R3HDM2-202ENST00000358907 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
R3HDM2-202ENST00000358907 A2MP01023 1474 aa13.12□□□□□ -0.31
R3HDM2-202ENST00000358907 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
R3HDM2-202ENST00000358907 ARID3AQ99856 593 aa13.12□□□□□ -0.31
R3HDM2-202ENST00000358907 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
R3HDM2-202ENST00000358907 SYNJ2O15056 1496 aa13.11□□□□□ -0.31
R3HDM2-202ENST00000358907 ZNF521Q96K83 1311 aa13.11□□□□□ -0.31
R3HDM2-202ENST00000358907 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
R3HDM2-202ENST00000358907 SRPK2P78362 688 aaKnown RBP13.11□□□□□ -0.31
R3HDM2-202ENST00000358907 EXOSC9Q06265 439 aaKnown RBP13.11□□□□□ -0.31
R3HDM2-202ENST00000358907 PKNOX2Q96KN3 472 aa13.11□□□□□ -0.31
R3HDM2-202ENST00000358907 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
R3HDM2-202ENST00000358907 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
R3HDM2-202ENST00000358907 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
R3HDM2-202ENST00000358907 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
R3HDM2-202ENST00000358907 PTMSP20962 102 aa13.1□□□□□ -0.31
R3HDM2-202ENST00000358907 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
R3HDM2-202ENST00000358907 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
R3HDM2-202ENST00000358907 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
R3HDM2-202ENST00000358907 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
R3HDM2-202ENST00000358907 APBB1O00213 710 aa13.09□□□□□ -0.31
R3HDM2-202ENST00000358907 USP19O94966 1318 aa13.09□□□□□ -0.31
R3HDM2-202ENST00000358907 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
R3HDM2-202ENST00000358907 ASXL1Q8IXJ9 1541 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms