RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 CCDC27Q2M243 656 aa10.81□□□□□ -0.68
CTNND1-201ENST00000358694 SAFBQ15424 915 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTNND1-201ENST00000358694 CCDC191Q8NCU4 936 aa10.8□□□□□ -0.68
CTNND1-201ENST00000358694 HSP90AA2PQ14568 343 aaPredicted RBP10.8□□□□□ -0.68
CTNND1-201ENST00000358694 FOSBP53539 338 aa10.8□□□□□ -0.68
CTNND1-201ENST00000358694 RBM19Q9Y4C8 960 aaKnown RBP10.8□□□□□ -0.68
CTNND1-201ENST00000358694 PPP1R1BQ9UD71 204 aaPredicted RBP10.8□□□□□ -0.68
CTNND1-201ENST00000358694 DCTN1Q14203 1278 aa10.79□□□□□ -0.68
CTNND1-201ENST00000358694 CCDC97Q96F63 343 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-201ENST00000358694 ACBD3Q9H3P7 528 aa10.79□□□□□ -0.68
CTNND1-201ENST00000358694 SKIDA1Q1XH10 827 aa10.79□□□□□ -0.68
CTNND1-201ENST00000358694 KIF3BO15066 747 aa10.78□□□□□ -0.68
CTNND1-201ENST00000358694 FOXD1Q16676 465 aa10.78□□□□□ -0.68
CTNND1-201ENST00000358694 ZRSR2Q15696 482 aaKnown RBP10.78□□□□□ -0.68
CTNND1-201ENST00000358694 BRMS1Q9HCU9 246 aa10.78□□□□□ -0.68
CTNND1-201ENST00000358694 RRP7AQ9Y3A4 280 aaKnown RBP10.78□□□□□ -0.68
CTNND1-201ENST00000358694 CAGE1Q8TC20 777 aa10.78□□□□□ -0.68
CTNND1-201ENST00000358694 NECTIN2Q92692 538 aa10.78□□□□□ -0.68
CTNND1-201ENST00000358694 COG3Q96JB2 828 aa10.78□□□□□ -0.68
CTNND1-201ENST00000358694 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
CTNND1-201ENST00000358694 MYO6Q9UM54 1294 aa10.77□□□□□ -0.68
CTNND1-201ENST00000358694 RNF20Q5VTR2 975 aa10.77□□□□□ -0.68
CTNND1-201ENST00000358694 MNS1Q8NEH6 495 aa10.77□□□□□ -0.69
CTNND1-201ENST00000358694 DDX58O95786 925 aaKnown RBP10.77□□□□□ -0.69
CTNND1-201ENST00000358694 G3BP1Q13283 466 aaKnown RBP eCLIP10.77□□□□□ -0.698e-9■□□□□ 11.1
CTNND1-201ENST00000358694 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.69
CTNND1-201ENST00000358694 CEP162Q5TB80 1403 aa10.77□□□□□ -0.69
CTNND1-201ENST00000358694 KIF27Q86VH2 1401 aa10.77□□□□□ -0.69
CTNND1-201ENST00000358694 NEFHP12036 1026 aa10.77□□□□□ -0.69
CTNND1-201ENST00000358694 HSP90B2PQ58FF3 399 aa10.76□□□□□ -0.69
CTNND1-201ENST00000358694 ANKRD62A6NC57 917 aa10.76□□□□□ -0.69
CTNND1-201ENST00000358694 CCER2I3L3R5 266 aa10.76□□□□□ -0.69
CTNND1-201ENST00000358694 PPM1FP49593 454 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-201ENST00000358694 SKOR2Q2VWA4 1001 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-201ENST00000358694 SYCP1Q15431 976 aa10.76□□□□□ -0.69
CTNND1-201ENST00000358694 SASS6Q6UVJ0 657 aa10.76□□□□□ -0.69
CTNND1-201ENST00000358694 NOM1Q5C9Z4 860 aaKnown RBP10.76□□□□□ -0.69
CTNND1-201ENST00000358694 PLCD4Q9BRC7 762 aa10.76□□□□□ -0.69
CTNND1-201ENST00000358694 EFCAB2Q5VUJ9 269 aa10.75□□□□□ -0.69
CTNND1-201ENST00000358694 ARGLU1Q9NWB6 273 aaPredicted RBP10.75□□□□□ -0.69
CTNND1-201ENST00000358694 WASHC2AQ641Q2 1341 aa10.75□□□□□ -0.69
CTNND1-201ENST00000358694 VPS37CA5D8V6 355 aaPredicted RBP10.75□□□□□ -0.69
CTNND1-201ENST00000358694 PDILTQ8N807 584 aa10.75□□□□□ -0.69
CTNND1-201ENST00000358694 WASHC4Q2M389 1173 aa10.75□□□□□ -0.69
CTNND1-201ENST00000358694 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
CTNND1-201ENST00000358694 KDM4AO75164 1064 aa10.74□□□□□ -0.69
CTNND1-201ENST00000358694 TTLL5Q6EMB2 1281 aa10.74□□□□□ -0.69
CTNND1-201ENST00000358694 OLFM4Q6UX06 510 aa10.74□□□□□ -0.69
CTNND1-201ENST00000358694 H0YHG0 523 aa10.74□□□□□ -0.69
CTNND1-201ENST00000358694 XBP1P17861 261 aa10.74□□□□□ -0.69
CTNND1-201ENST00000358694 CCDC73Q6ZRK6 1079 aa10.74□□□□□ -0.69
CTNND1-201ENST00000358694 TRAK1Q9UPV9 953 aa10.74□□□□□ -0.69
CTNND1-201ENST00000358694 NEUROD6Q96NK8 337 aa10.74□□□□□ -0.69
CTNND1-201ENST00000358694 IPO9Q96P70 1041 aaKnown RBP10.74□□□□□ -0.69
CTNND1-201ENST00000358694 BCL2L13Q9BXK5 485 aa10.73□□□□□ -0.69
CTNND1-201ENST00000358694 PLIN1O60240 522 aa10.73□□□□□ -0.69
CTNND1-201ENST00000358694 PSME1Q06323 249 aa10.73□□□□□ -0.69
CTNND1-201ENST00000358694 CDK5RAP3Q96JB5 506 aa10.73□□□□□ -0.69
CTNND1-201ENST00000358694 NUP155O75694 1391 aa10.73□□□□□ -0.69
CTNND1-201ENST00000358694 REC8O95072 547 aa10.73□□□□□ -0.69
CTNND1-201ENST00000358694 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
CTNND1-201ENST00000358694 PDCL3Q9H2J4 239 aa10.73□□□□□ -0.69
CTNND1-201ENST00000358694 KRT18P05783 430 aaKnown RBP10.72□□□□□ -0.69
CTNND1-201ENST00000358694 SF3B2Q13435 895 aaKnown RBP10.72□□□□□ -0.69
CTNND1-201ENST00000358694 EEA1Q15075 1411 aa10.72□□□□□ -0.69
CTNND1-201ENST00000358694 ANKRD18AQ8IVF6 992 aa10.72□□□□□ -0.69
CTNND1-201ENST00000358694 IFT57Q9NWB7 429 aa10.72□□□□□ -0.69
CTNND1-201ENST00000358694 SMC3Q9UQE7 1217 aa10.71□□□□□ -0.69
CTNND1-201ENST00000358694 NEBLO76041 1014 aa10.71□□□□□ -0.69
CTNND1-201ENST00000358694 SEPT7Q16181 437 aaKnown RBP10.71□□□□□ -0.69
CTNND1-201ENST00000358694 IBSPP21815 317 aaPredicted RBP10.71□□□□□ -0.7
CTNND1-201ENST00000358694 CGNL1Q0VF96 1302 aa10.7□□□□□ -0.7
CTNND1-201ENST00000358694 ZKSCAN2Q63HK3 967 aa10.7□□□□□ -0.7
CTNND1-201ENST00000358694 ERCC4Q92889 916 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-201ENST00000358694 FAM177BA6PVY3 158 aa10.7□□□□□ -0.7
CTNND1-201ENST00000358694 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-201ENST00000358694 RIC3Q7Z5B4 369 aa10.69□□□□□ -0.7
CTNND1-201ENST00000358694 MAGEC2Q9UBF1 373 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-201ENST00000358694 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
CTNND1-201ENST00000358694 AIMP1Q12904 312 aaKnown RBP10.69□□□□□ -0.7
CTNND1-201ENST00000358694 NAT10Q9H0A0 1025 aaKnown RBP10.69□□□□□ -0.7
CTNND1-201ENST00000358694 FAM13BQ9NYF5 915 aa10.68□□□□□ -0.7
CTNND1-201ENST00000358694 FHAD1B1AJZ9 1412 aa10.68□□□□□ -0.7
CTNND1-201ENST00000358694 ERC2O15083 957 aa10.68□□□□□ -0.7
CTNND1-201ENST00000358694 SART3Q15020 963 aaKnown RBP10.68□□□□□ -0.7
CTNND1-201ENST00000358694 RAPGEF4Q8WZA2 1011 aa10.68□□□□□ -0.7
CTNND1-201ENST00000358694 ENOX2Q16206 610 aaKnown RBP10.68□□□□□ -0.7
CTNND1-201ENST00000358694 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
CTNND1-201ENST00000358694 ERLIN2O94905 339 aa10.67□□□□□ -0.7
CTNND1-201ENST00000358694 ATP2B1P20020 1258 aa10.67□□□□□ -0.7
CTNND1-201ENST00000358694 TSPYL1Q9H0U9 437 aa10.67□□□□□ -0.7
CTNND1-201ENST00000358694 SLC3A2P08195 630 aaKnown RBP10.67□□□□□ -0.7
CTNND1-201ENST00000358694 HSP90AB4PQ58FF6 505 aa10.67□□□□□ -0.7
CTNND1-201ENST00000358694 RSPH6AQ9H0K4 717 aa10.67□□□□□ -0.7
CTNND1-201ENST00000358694 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
CTNND1-201ENST00000358694 MPHOSPH10O00566 681 aaKnown RBP10.67□□□□□ -0.7
CTNND1-201ENST00000358694 EZRP15311 586 aaKnown RBP10.66□□□□□ -0.7
CTNND1-201ENST00000358694 TBC1D2BQ9UPU7 963 aa10.66□□□□□ -0.7
CTNND1-201ENST00000358694 BRPF1P55201 1214 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-201ENST00000358694 SDF4Q9BRK5 362 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms