RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 PHLDB1Q86UU1 1377 aa8.5□□□□□ -1.05
NF1-202ENST00000358273 TEX2Q8IWB9 1127 aa8.5□□□□□ -1.05
NF1-202ENST00000358273 RNF214Q8ND24 703 aa8.5□□□□□ -1.05
NF1-202ENST00000358273 RSPH4AQ5TD94 716 aa8.5□□□□□ -1.05
NF1-202ENST00000358273 RALBP1Q15311 655 aa8.5□□□□□ -1.05
NF1-202ENST00000358273 C22orf23Q9BZE7 217 aa8.5□□□□□ -1.05
NF1-202ENST00000358273 ROCK2O75116 1388 aaKnown RBP8.49□□□□□ -1.05
NF1-202ENST00000358273 CCDC7Q96M83 1385 aa8.49□□□□□ -1.05
NF1-202ENST00000358273 TSPY26PQ9H489 355 aa8.49□□□□□ -1.05
NF1-202ENST00000358273 MTUS2Q5JR59 1369 aa8.49□□□□□ -1.05
NF1-202ENST00000358273 AK7Q96M32 723 aa8.49□□□□□ -1.05
NF1-202ENST00000358273 MCM5P33992 734 aa8.49□□□□□ -1.05
NF1-202ENST00000358273 MYBBP1AQ9BQG0 1328 aaKnown RBP8.49□□□□□ -1.05
NF1-202ENST00000358273 U2SURPO15042 1029 aaKnown RBP8.49□□□□□ -1.05
NF1-202ENST00000358273 FAM193AP78312 1265 aa8.49□□□□□ -1.05
NF1-202ENST00000358273 CHMP3Q9Y3E7 222 aa8.48□□□□□ -1.05
NF1-202ENST00000358273 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
NF1-202ENST00000358273 TICAM2Q86XR7 235 aa8.48□□□□□ -1.05
NF1-202ENST00000358273 ERICH3Q5RHP9 1530 aa8.48□□□□□ -1.05
NF1-202ENST00000358273 PMFBP1Q8TBY8 1022 aa8.48□□□□□ -1.05
NF1-202ENST00000358273 KIF21AQ7Z4S6 1674 aa8.47□□□□□ -1.05
NF1-202ENST00000358273 TMX1Q9H3N1 280 aa8.47□□□□□ -1.05
NF1-202ENST00000358273 KNSTRNQ9Y448 316 aa8.47□□□□□ -1.05
NF1-202ENST00000358273 MYO18AQ92614 2054 aaKnown RBP8.47□□□□□ -1.05
NF1-202ENST00000358273 ARGLU1Q9NWB6 273 aaPredicted RBP8.47□□□□□ -1.05
NF1-202ENST00000358273 FAM177BA6PVY3 158 aa8.47□□□□□ -1.05
NF1-202ENST00000358273 RDXP35241 583 aaKnown RBP8.47□□□□□ -1.05
NF1-202ENST00000358273 LMOD3Q0VAK6 560 aa8.47□□□□□ -1.05
NF1-202ENST00000358273 MAPKBP1O60336 1514 aa8.47□□□□□ -1.05
NF1-202ENST00000358273 CENPHQ9H3R5 247 aa8.46□□□□□ -1.05
NF1-202ENST00000358273 LEKR1Q6ZMV7 388 aa8.46□□□□□ -1.06
NF1-202ENST00000358273 MYCBPQ99417 103 aaPredicted RBP8.46□□□□□ -1.06
NF1-202ENST00000358273 H0YHG0 523 aa8.46□□□□□ -1.06
NF1-202ENST00000358273 GTF2F1P35269 517 aaKnown RBP eCLIP8.46□□□□□ -1.065e-6■■■■□ 24.4
NF1-202ENST00000358273 ITPRIPQ8IWB1 547 aa8.46□□□□□ -1.06
NF1-202ENST00000358273 RAPGEF2Q9Y4G8 1499 aa8.45□□□□□ -1.06
NF1-202ENST00000358273 TDO2P48775 406 aa8.45□□□□□ -1.06
NF1-202ENST00000358273 USP47Q96K76 1375 aa8.45□□□□□ -1.06
NF1-202ENST00000358273 BANK1Q8NDB2 785 aa8.45□□□□□ -1.06
NF1-202ENST00000358273 CGNL1Q0VF96 1302 aa8.45□□□□□ -1.06
NF1-202ENST00000358273 CARD11Q9BXL7 1154 aa8.45□□□□□ -1.06
NF1-202ENST00000358273 CREBRFQ8IUR6 639 aa8.45□□□□□ -1.06
NF1-202ENST00000358273 SECISBP2LQ93073 1101 aaKnown RBP8.45□□□□□ -1.06
NF1-202ENST00000358273 PRIMPOLQ96LW4 560 aa8.45□□□□□ -1.06
NF1-202ENST00000358273 FMN1Q68DA7 1419 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 SOX12O15370 315 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 CCDC112Q8NEF3 446 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 RRBP1Q9P2E9 1410 aaKnown RBP8.44□□□□□ -1.06
NF1-202ENST00000358273 TPD52L1Q16890 204 aaPredicted RBP8.44□□□□□ -1.06
NF1-202ENST00000358273 KRT222Q8N1A0 295 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 TPM3P06753 285 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
NF1-202ENST00000358273 TERF1P54274 439 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 SPC24Q8NBT2 197 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 KIF7Q2M1P5 1343 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 STK11IPQ8N1F8 1099 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 TPM4P67936 248 aa8.44□□□□□ -1.06
NF1-202ENST00000358273 HS1BP3Q53T59 392 aa8.43□□□□□ -1.06
NF1-202ENST00000358273 ST18O60284 1047 aa8.43□□□□□ -1.06
NF1-202ENST00000358273 NLRP13Q86W25 1043 aa8.43□□□□□ -1.06
NF1-202ENST00000358273 SYCE3A1L190 88 aa8.43□□□□□ -1.06
NF1-202ENST00000358273 CCDC184Q52MB2 194 aa8.42□□□□□ -1.06
NF1-202ENST00000358273 GIMAP7Q8NHV1 300 aa8.42□□□□□ -1.06
NF1-202ENST00000358273 PIK3R5Q8WYR1 880 aa8.42□□□□□ -1.06
NF1-202ENST00000358273 BRD4O60885 1362 aaPredicted RBP8.42□□□□□ -1.06
NF1-202ENST00000358273 PLPPR3Q6T4P5 718 aa8.42□□□□□ -1.06
NF1-202ENST00000358273 RSPH14Q9UHP6 348 aa8.42□□□□□ -1.06
NF1-202ENST00000358273 CCDC191Q8NCU4 936 aa8.42□□□□□ -1.06
NF1-202ENST00000358273 NOL10Q9BSC4 688 aaKnown RBP8.42□□□□□ -1.06
NF1-202ENST00000358273 ERBB4Q15303 1308 aa8.41□□□□□ -1.06
NF1-202ENST00000358273 POLR3GO15318 223 aaPredicted RBP8.41□□□□□ -1.06
NF1-202ENST00000358273 POLR1AO95602 1720 aaPredicted RBP8.41□□□□□ -1.06
NF1-202ENST00000358273 GABPB1Q06547 395 aaPredicted RBP8.41□□□□□ -1.06
NF1-202ENST00000358273 ZNF622Q969S3 477 aaKnown RBP eCLIP8.41□□□□□ -1.066e-7■□□□□ 8.1
NF1-202ENST00000358273 SLC26A8Q96RN1 970 aa8.41□□□□□ -1.06
NF1-202ENST00000358273 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
NF1-202ENST00000358273 TXLNBQ8N3L3 684 aa8.41□□□□□ -1.06
NF1-202ENST00000358273 RASSF4Q9H2L5 321 aa8.41□□□□□ -1.06
NF1-202ENST00000358273 MCCP23508 829 aa8.41□□□□□ -1.06
NF1-202ENST00000358273 TNPO1Q92973 898 aaKnown RBP8.4□□□□□ -1.06
NF1-202ENST00000358273 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.06
NF1-202ENST00000358273 CLUAP1Q96AJ1 413 aa8.4□□□□□ -1.06
NF1-202ENST00000358273 PANK1Q8TE04 598 aa8.4□□□□□ -1.07
NF1-202ENST00000358273 FOXD1Q16676 465 aa8.4□□□□□ -1.07
NF1-202ENST00000358273 HSP90B2PQ58FF3 399 aa8.4□□□□□ -1.07
NF1-202ENST00000358273 BCCIPQ9P287 314 aaKnown RBP eCLIP8.4□□□□□ -1.072e-7■■■■■ 30.3
NF1-202ENST00000358273 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
NF1-202ENST00000358273 PLEKHH2Q8IVE3 1493 aa8.39□□□□□ -1.07
NF1-202ENST00000358273 MNS1Q8NEH6 495 aa8.39□□□□□ -1.07
NF1-202ENST00000358273 GOLIM4O00461 696 aa8.39□□□□□ -1.07
NF1-202ENST00000358273 CTR9Q6PD62 1173 aa8.39□□□□□ -1.07
NF1-202ENST00000358273 RUSC2Q8N2Y8 1516 aa8.39□□□□□ -1.07
NF1-202ENST00000358273 USP8P40818 1118 aa8.39□□□□□ -1.07
NF1-202ENST00000358273 CT47A1Q5JQC4 288 aaPredicted RBP8.39□□□□□ -1.07
NF1-202ENST00000358273 OGFRQ9NZT2 677 aa8.39□□□□□ -1.07
NF1-202ENST00000358273 CIZ1Q9ULV3 898 aaPredicted RBP8.39□□□□□ -1.07
NF1-202ENST00000358273 NOL7Q9UMY1 257 aaKnown RBP8.39□□□□□ -1.07
NF1-202ENST00000358273 GOLGA4Q13439 2230 aaKnown RBP8.39□□□□□ -1.07
NF1-202ENST00000358273 CCDC91Q7Z6B0 441 aa8.38□□□□□ -1.07
NF1-202ENST00000358273 HOMER1Q86YM7 354 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms