RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 UQCRHLA0A096LP55 91 aa23.32■■□□□ 1.32
BRPF3-202ENST00000357641 UQCRHP07919 91 aa23.32■■□□□ 1.32
BRPF3-202ENST00000357641 CCDC191Q8NCU4 936 aa23.32■■□□□ 1.32
BRPF3-202ENST00000357641 ANKRD20A12PQ8NF67 263 aa23.32■■□□□ 1.32
BRPF3-202ENST00000357641 SMC3Q9UQE7 1217 aa23.32■■□□□ 1.32
BRPF3-202ENST00000357641 HMGN5P82970 282 aaKnown RBP23.31■■□□□ 1.32
BRPF3-202ENST00000357641 LMOD3Q0VAK6 560 aa23.31■■□□□ 1.32
BRPF3-202ENST00000357641 HSP90AB3PQ58FF7 597 aa23.31■■□□□ 1.32
BRPF3-202ENST00000357641 VPS53Q5VIR6 699 aa23.3■■□□□ 1.32
BRPF3-202ENST00000357641 PANK3Q9H999 370 aa23.3■■□□□ 1.32
BRPF3-202ENST00000357641 FBXO3Q9UK99 471 aa23.3■■□□□ 1.32
BRPF3-202ENST00000357641 CHMP4CQ96CF2 233 aa23.3■■□□□ 1.32
BRPF3-202ENST00000357641 CHMP4AQ9BY43 222 aa23.3■■□□□ 1.32
BRPF3-202ENST00000357641 FMN1Q68DA7 1419 aa23.3■■□□□ 1.32
BRPF3-202ENST00000357641 DHX57Q6P158 1386 aaKnown RBP23.3■■□□□ 1.32
BRPF3-202ENST00000357641 NUP155O75694 1391 aa23.29■■□□□ 1.32
BRPF3-202ENST00000357641 DDX19BQ9UMR2 479 aa23.28■■□□□ 1.32
BRPF3-202ENST00000357641 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
BRPF3-202ENST00000357641 PLCD4Q9BRC7 762 aa23.28■■□□□ 1.32
BRPF3-202ENST00000357641 WWC1Q8IX03 1113 aa23.28■■□□□ 1.32
BRPF3-202ENST00000357641 TSPY26PQ9H489 355 aa23.28■■□□□ 1.32
BRPF3-202ENST00000357641 FOSBP53539 338 aa23.27■■□□□ 1.32
BRPF3-202ENST00000357641 AKAP17AQ02040 695 aaKnown RBP23.27■■□□□ 1.32
BRPF3-202ENST00000357641 SKIDA1Q1XH10 827 aa23.27■■□□□ 1.32
BRPF3-202ENST00000357641 NAP1L1P55209 391 aaKnown RBP23.26■■□□□ 1.31
BRPF3-202ENST00000357641 PDILTQ8N807 584 aa23.26■■□□□ 1.31
BRPF3-202ENST00000357641 ERCC4Q92889 916 aaPredicted RBP23.26■■□□□ 1.31
BRPF3-202ENST00000357641 INTS3Q68E01 1043 aaKnown RBP23.25■■□□□ 1.31
BRPF3-202ENST00000357641 CCDC73Q6ZRK6 1079 aa23.25■■□□□ 1.31
BRPF3-202ENST00000357641 TRIM5Q9C035 493 aa23.25■■□□□ 1.31
BRPF3-202ENST00000357641 RUFY2Q8WXA3 655 aa23.25■■□□□ 1.31
BRPF3-202ENST00000357641 TSPYL1Q9H0U9 437 aa23.25■■□□□ 1.31
BRPF3-202ENST00000357641 HOOK1Q9UJC3 728 aaKnown RBP23.25■■□□□ 1.31
BRPF3-202ENST00000357641 TRIM29Q14134 588 aa23.25■■□□□ 1.31
BRPF3-202ENST00000357641 DZIP1LQ8IYY4 767 aaKnown RBP23.24■■□□□ 1.31
BRPF3-202ENST00000357641 APAF1O14727 1248 aa23.24■■□□□ 1.31
BRPF3-202ENST00000357641 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
BRPF3-202ENST00000357641 DCTN1Q14203 1278 aa23.23■■□□□ 1.31
BRPF3-202ENST00000357641 CAGE1Q8TC20 777 aa23.23■■□□□ 1.31
BRPF3-202ENST00000357641 TTLL5Q6EMB2 1281 aa23.23■■□□□ 1.31
BRPF3-202ENST00000357641 LNPKQ9C0E8 428 aa23.23■■□□□ 1.31
BRPF3-202ENST00000357641 PRPF40AO75400 957 aaKnown RBP23.22■■□□□ 1.31
BRPF3-202ENST00000357641 SPC24Q8NBT2 197 aa23.22■■□□□ 1.31
BRPF3-202ENST00000357641 GRPEL1Q9HAV7 217 aa23.22■■□□□ 1.31
BRPF3-202ENST00000357641 TERF2IPQ9NYB0 399 aa23.21■■□□□ 1.31
BRPF3-202ENST00000357641 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
BRPF3-202ENST00000357641 SYNE3Q6ZMZ3 975 aa23.2■■□□□ 1.31
BRPF3-202ENST00000357641 MPNDQ8N594 471 aa23.2■■□□□ 1.3
BRPF3-202ENST00000357641 ERICH4A6NGS2 130 aa23.2■■□□□ 1.3
BRPF3-202ENST00000357641 CPLX1O14810 134 aa23.19■■□□□ 1.3
BRPF3-202ENST00000357641 NAT10Q9H0A0 1025 aaKnown RBP23.19■■□□□ 1.3
BRPF3-202ENST00000357641 PRDM10Q9NQV6 1147 aa23.19■■□□□ 1.3
BRPF3-202ENST00000357641 LETM1O95202 739 aaPredicted RBP23.19■■□□□ 1.3
BRPF3-202ENST00000357641 CPLX2Q6PUV4 134 aaKnown RBP23.18■■□□□ 1.3
BRPF3-202ENST00000357641 AXDND1Q5T1B0 1012 aaPredicted RBP23.18■■□□□ 1.3
BRPF3-202ENST00000357641 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
BRPF3-202ENST00000357641 CSB-PGBD3P0DP91 1061 aa23.18■■□□□ 1.3
BRPF3-202ENST00000357641 CCDC47Q96A33 483 aaKnown RBP23.17■■□□□ 1.3
BRPF3-202ENST00000357641 CCDC27Q2M243 656 aa23.17■■□□□ 1.3
BRPF3-202ENST00000357641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.16■■□□□ 1.3
BRPF3-202ENST00000357641 MBD3O95983 291 aa23.16■■□□□ 1.3
BRPF3-202ENST00000357641 CARMIL1Q5VZK9 1371 aa23.16■■□□□ 1.3
BRPF3-202ENST00000357641 SMC2O95347 1197 aa23.16■■□□□ 1.3
BRPF3-202ENST00000357641 HDGFP51858 240 aaKnown RBP23.16■■□□□ 1.3
BRPF3-202ENST00000357641 ESPNB1AK53 854 aa23.15■■□□□ 1.3
BRPF3-202ENST00000357641 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
BRPF3-202ENST00000357641 OLFM4Q6UX06 510 aa23.14■■□□□ 1.3
BRPF3-202ENST00000357641 CDC45O75419 566 aa23.13■■□□□ 1.29
BRPF3-202ENST00000357641 RNF20Q5VTR2 975 aa23.13■■□□□ 1.29
BRPF3-202ENST00000357641 GGT6Q6P531 493 aa23.13■■□□□ 1.29
BRPF3-202ENST00000357641 CCDC112Q8NEF3 446 aa23.13■■□□□ 1.29
BRPF3-202ENST00000357641 DHX37Q8IY37 1157 aaKnown RBP23.11■■□□□ 1.29
BRPF3-202ENST00000357641 IFIT2P09913 472 aaKnown RBP23.11■■□□□ 1.29
BRPF3-202ENST00000357641 TAF3Q5VWG9 929 aa23.11■■□□□ 1.29
BRPF3-202ENST00000357641 SDF4Q9BRK5 362 aa23.11■■□□□ 1.29
BRPF3-202ENST00000357641 ANKRD30AQ9BXX3 1397 aa23.1■■□□□ 1.29
BRPF3-202ENST00000357641 MLECQ14165 292 aa23.1■■□□□ 1.29
BRPF3-202ENST00000357641 CCP110O43303 1012 aa23.09■■□□□ 1.29
BRPF3-202ENST00000357641 KIAA0754O94854 1291 aa23.09■■□□□ 1.29
BRPF3-202ENST00000357641 CT47B1P0C2W7 299 aaPredicted RBP23.09■■□□□ 1.29
BRPF3-202ENST00000357641 USP47Q96K76 1375 aa23.08■■□□□ 1.29
BRPF3-202ENST00000357641 LTV1Q96GA3 475 aaPredicted RBP23.08■■□□□ 1.28
BRPF3-202ENST00000357641 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.08■■□□□ 1.28
BRPF3-202ENST00000357641 AEBP1Q8IUX7 1158 aa23.07■■□□□ 1.28
BRPF3-202ENST00000357641 CBX1P83916 185 aa23.07■■□□□ 1.28
BRPF3-202ENST00000357641 DEF6Q9H4E7 631 aa23.07■■□□□ 1.28
BRPF3-202ENST00000357641 FMNL2Q96PY5 1086 aa23.06■■□□□ 1.28
BRPF3-202ENST00000357641 PDCL2Q8N4E4 241 aa23.06■■□□□ 1.28
BRPF3-202ENST00000357641 AMPHP49418 695 aa23.06■■□□□ 1.28
BRPF3-202ENST00000357641 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
BRPF3-202ENST00000357641 UBE2Q2Q8WVN8 375 aa23.05■■□□□ 1.28
BRPF3-202ENST00000357641 BACH2Q9BYV9 841 aa23.05■■□□□ 1.28
BRPF3-202ENST00000357641 NUTM2DQ5VT03 806 aaPredicted RBP23.05■■□□□ 1.28
BRPF3-202ENST00000357641 NFXL1Q6ZNB6 911 aa23.05■■□□□ 1.28
BRPF3-202ENST00000357641 CUX2O14529 1486 aa23.03■■□□□ 1.28
BRPF3-202ENST00000357641 FIBPO43427 364 aa23.03■■□□□ 1.28
BRPF3-202ENST00000357641 TRAK1Q9UPV9 953 aa23.02■■□□□ 1.28
BRPF3-202ENST00000357641 MSH5O43196 834 aa23.02■■□□□ 1.28
BRPF3-202ENST00000357641 NECTIN2Q92692 538 aa23.02■■□□□ 1.28
BRPF3-202ENST00000357641 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms