RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 UHRF1BP1Q6BDS2 1440 aa5.84□□□□□ -1.47
LIG4-201ENST00000356922 NLRP1Q9C000 1473 aa5.84□□□□□ -1.47
LIG4-201ENST00000356922 SLC26A8Q96RN1 970 aa5.84□□□□□ -1.47
LIG4-201ENST00000356922 PPP1R15AO75807 674 aaPredicted RBP5.84□□□□□ -1.47
LIG4-201ENST00000356922 THEMISQ8N1K5 641 aaPredicted RBP5.84□□□□□ -1.47
LIG4-201ENST00000356922 NEXMIFQ5QGS0 1516 aa5.84□□□□□ -1.48
LIG4-201ENST00000356922 CFAP70Q5T0N1 1121 aa5.84□□□□□ -1.48
LIG4-201ENST00000356922 TMEM132EQ6IEE7 984 aa5.84□□□□□ -1.48
LIG4-201ENST00000356922 CLSPNQ9HAW4 1339 aa5.83□□□□□ -1.48
LIG4-201ENST00000356922 RIMS2Q9UQ26 1411 aa5.83□□□□□ -1.48
LIG4-201ENST00000356922 KIF1BO60333 1816 aa5.83□□□□□ -1.48
LIG4-201ENST00000356922 ARHGAP23Q9P227 1491 aa5.83□□□□□ -1.48
LIG4-201ENST00000356922 STRCQ7RTU9 1775 aa5.82□□□□□ -1.48
LIG4-201ENST00000356922 RBM33Q96EV2 1170 aaKnown RBP5.82□□□□□ -1.48
LIG4-201ENST00000356922 TONSLQ96HA7 1378 aa5.82□□□□□ -1.48
LIG4-201ENST00000356922 SLIT1O75093 1534 aa5.82□□□□□ -1.48
LIG4-201ENST00000356922 ZNF142P52746 1687 aaPredicted RBP5.81□□□□□ -1.48
LIG4-201ENST00000356922 HIRIP3Q9BW71 556 aaPredicted RBP5.81□□□□□ -1.48
LIG4-201ENST00000356922 METP08581 1390 aa5.81□□□□□ -1.48
LIG4-201ENST00000356922 NEURL4Q96JN8 1562 aa5.81□□□□□ -1.48
LIG4-201ENST00000356922 PPLO60437 1756 aa5.81□□□□□ -1.48
LIG4-201ENST00000356922 ANKLE2Q86XL3 938 aa5.81□□□□□ -1.48
LIG4-201ENST00000356922 IFT172Q9UG01 1749 aa5.81□□□□□ -1.48
LIG4-201ENST00000356922 ADAMTS13Q76LX8 1427 aa5.81□□□□□ -1.48
LIG4-201ENST00000356922 NRXN3Q9Y4C0 1643 aa5.8□□□□□ -1.48
LIG4-201ENST00000356922 PRAG1Q86YV5 1406 aa5.8□□□□□ -1.48
LIG4-201ENST00000356922 VGFO15240 615 aaPredicted RBP5.8□□□□□ -1.48
LIG4-201ENST00000356922 NRXN1Q9ULB1 1477 aa5.8□□□□□ -1.48
LIG4-201ENST00000356922 PIK3C2GO75747 1445 aa5.8□□□□□ -1.48
LIG4-201ENST00000356922 C14orf93Q9H972 538 aaKnown RBP5.8□□□□□ -1.48
LIG4-201ENST00000356922 RPGRIP1LQ68CZ1 1315 aa5.8□□□□□ -1.48
LIG4-201ENST00000356922 SCAF11Q99590 1463 aaKnown RBP5.79□□□□□ -1.48
LIG4-201ENST00000356922 BCANQ96GW7 911 aa5.79□□□□□ -1.48
LIG4-201ENST00000356922 KDM5AP29375 1690 aaKnown RBP5.79□□□□□ -1.48
LIG4-201ENST00000356922 PTPRUQ92729 1446 aa5.79□□□□□ -1.48
LIG4-201ENST00000356922 STK26Q9P289 416 aa5.79□□□□□ -1.48
LIG4-201ENST00000356922 EID1Q9Y6B2 187 aa5.79□□□□□ -1.48
LIG4-201ENST00000356922 MED14O60244 1454 aa5.79□□□□□ -1.48
LIG4-201ENST00000356922 ASXL1Q8IXJ9 1541 aa5.78□□□□□ -1.48
LIG4-201ENST00000356922 PLEKHG1Q9ULL1 1385 aa5.78□□□□□ -1.48
LIG4-201ENST00000356922 IQGAP1P46940 1657 aa5.78□□□□□ -1.48
LIG4-201ENST00000356922 WAPLQ7Z5K2 1190 aa5.78□□□□□ -1.48
LIG4-201ENST00000356922 ALKQ9UM73 1620 aa5.78□□□□□ -1.48
LIG4-201ENST00000356922 ZNF335Q9H4Z2 1342 aaPredicted RBP5.78□□□□□ -1.48
LIG4-201ENST00000356922 TIMELESSQ9UNS1 1208 aa5.78□□□□□ -1.48
LIG4-201ENST00000356922 NPHP4O75161 1426 aaPredicted RBP5.78□□□□□ -1.48
LIG4-201ENST00000356922 MYOM2P54296 1465 aa5.77□□□□□ -1.49
LIG4-201ENST00000356922 KCNA6P17658 529 aa5.77□□□□□ -1.49
LIG4-201ENST00000356922 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.77□□□□□ -1.49
LIG4-201ENST00000356922 TRAK1Q9UPV9 953 aa5.77□□□□□ -1.49
LIG4-201ENST00000356922 SETD1AO15047 1707 aaKnown RBP5.77□□□□□ -1.49
LIG4-201ENST00000356922 ADGRB1O14514 1584 aa5.77□□□□□ -1.49
LIG4-201ENST00000356922 SAFB2Q14151 953 aaKnown RBP eCLIP5.77□□□□□ -1.49
LIG4-201ENST00000356922 TBX22Q9Y458 520 aa5.77□□□□□ -1.49
LIG4-201ENST00000356922 PLEKHH1Q9ULM0 1364 aa5.76□□□□□ -1.49
LIG4-201ENST00000356922 AMOTL2Q9Y2J4 779 aa5.76□□□□□ -1.49
LIG4-201ENST00000356922 STRCP1A6NGW2 1772 aa5.76□□□□□ -1.49
LIG4-201ENST00000356922 C11orf95C9JLR9 678 aaPredicted RBP5.76□□□□□ -1.49
LIG4-201ENST00000356922 SETBP1Q9Y6X0 1596 aa5.76□□□□□ -1.49
LIG4-201ENST00000356922 TRPM1Q7Z4N2 1603 aa5.76□□□□□ -1.49
LIG4-201ENST00000356922 ROBO2Q9HCK4 1378 aa5.76□□□□□ -1.49
LIG4-201ENST00000356922 HDGFP51858 240 aaKnown RBP5.75□□□□□ -1.49
LIG4-201ENST00000356922 CARD11Q9BXL7 1154 aa5.75□□□□□ -1.49
LIG4-201ENST00000356922 POLR1AO95602 1720 aaPredicted RBP5.75□□□□□ -1.49
LIG4-201ENST00000356922 ROCK2O75116 1388 aaKnown RBP5.75□□□□□ -1.49
LIG4-201ENST00000356922 ST20-MTHFSA0A0A6YYL1 179 aa5.75□□□□□ -1.49
LIG4-201ENST00000356922 YTHDC2Q9H6S0 1430 aaKnown RBP5.74□□□□□ -1.49
LIG4-201ENST00000356922 PRAM1Q96QH2 718 aa5.74□□□□□ -1.49
LIG4-201ENST00000356922 GPRASP1Q5JY77 1395 aa5.74□□□□□ -1.49
LIG4-201ENST00000356922 STAC3Q96MF2 364 aa5.74□□□□□ -1.49
LIG4-201ENST00000356922 HSPA5P11021 654 aaKnown RBP5.74□□□□□ -1.49
LIG4-201ENST00000356922 RALGAPBQ86X10 1494 aa5.73□□□□□ -1.49
LIG4-201ENST00000356922 TESK2Q96S53 571 aa5.73□□□□□ -1.49
LIG4-201ENST00000356922 CHD2O14647 1828 aaKnown RBP5.72□□□□□ -1.49
LIG4-201ENST00000356922 ABCC11Q96J66 1382 aa5.72□□□□□ -1.49
LIG4-201ENST00000356922 LRPPRCP42704 1394 aaKnown RBP5.72□□□□□ -1.49
LIG4-201ENST00000356922 NUTM2FA1L443 756 aa5.72□□□□□ -1.49
LIG4-201ENST00000356922 USP47Q96K76 1375 aa5.72□□□□□ -1.49
LIG4-201ENST00000356922 MINK1Q8N4C8 1332 aaPredicted RBP5.71□□□□□ -1.49
LIG4-201ENST00000356922 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.71□□□□□ -1.5
LIG4-201ENST00000356922 KIAA1210Q9ULL0 1709 aa5.71□□□□□ -1.5
LIG4-201ENST00000356922 ZEB1P37275 1124 aaPredicted RBP5.71□□□□□ -1.5
LIG4-201ENST00000356922 PROSER2Q86WR7 435 aaPredicted RBP5.71□□□□□ -1.5
LIG4-201ENST00000356922 TMEM94Q12767 1356 aa5.71□□□□□ -1.5
LIG4-201ENST00000356922 LTBP4Q8N2S1 1624 aa5.71□□□□□ -1.5
LIG4-201ENST00000356922 DMRT2Q9Y5R5 561 aa5.7□□□□□ -1.5
LIG4-201ENST00000356922 XRN1Q8IZH2 1706 aaKnown RBP5.7□□□□□ -1.5
LIG4-201ENST00000356922 LRRC7Q96NW7 1537 aa5.7□□□□□ -1.5
LIG4-201ENST00000356922 TECPR2O15040 1411 aa5.7□□□□□ -1.5
LIG4-201ENST00000356922 DISP3Q9P2K9 1392 aa5.7□□□□□ -1.5
LIG4-201ENST00000356922 XIRP1Q702N8 1843 aaKnown RBP5.7□□□□□ -1.5
LIG4-201ENST00000356922 ARHGEF28Q8N1W1 1705 aaKnown RBP5.7□□□□□ -1.5
LIG4-201ENST00000356922 EIF4G2P78344 907 aaKnown RBP eCLIP5.69□□□□□ -1.5
LIG4-201ENST00000356922 CABP2Q9NPB3 220 aa5.69□□□□□ -1.5
LIG4-201ENST00000356922 POGKQ9P215 609 aa5.69□□□□□ -1.5
LIG4-201ENST00000356922 CENPJQ9HC77 1338 aaPredicted RBP5.69□□□□□ -1.5
LIG4-201ENST00000356922 PIK3R4Q99570 1358 aa5.69□□□□□ -1.5
LIG4-201ENST00000356922 PRR36Q9H6K5 1346 aa5.69□□□□□ -1.5
LIG4-201ENST00000356922 DIP2AQ14689 1571 aa5.69□□□□□ -1.5
LIG4-201ENST00000356922 LAMC1P11047 1609 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms