RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 LRRFIP1Q32MZ4 808 aaKnown RBP21.06■□□□□ 0.96
COL27A1-201ENST00000356083 ANO2Q9NQ90 1003 aa21.05■□□□□ 0.96
COL27A1-201ENST00000356083 ANKRD62A6NC57 917 aa21.04■□□□□ 0.96
COL27A1-201ENST00000356083 HOOK1Q9UJC3 728 aaKnown RBP21.04■□□□□ 0.96
COL27A1-201ENST00000356083 DDX49Q9Y6V7 483 aaKnown RBP21.04■□□□□ 0.96
COL27A1-201ENST00000356083 BICD2Q8TD16 824 aa21.04■□□□□ 0.96
COL27A1-201ENST00000356083 HSP90AA2PQ14568 343 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-201ENST00000356083 ATP2B2Q01814 1243 aa21.03■□□□□ 0.96
COL27A1-201ENST00000356083 RBM19Q9Y4C8 960 aaKnown RBP21.02■□□□□ 0.96
COL27A1-201ENST00000356083 PSME1Q06323 249 aa21■□□□□ 0.95
COL27A1-201ENST00000356083 TRAK1Q9UPV9 953 aa21■□□□□ 0.95
COL27A1-201ENST00000356083 PKD2Q13563 968 aa21■□□□□ 0.95
COL27A1-201ENST00000356083 PDILTQ8N807 584 aa20.99■□□□□ 0.95
COL27A1-201ENST00000356083 LMOD3Q0VAK6 560 aa20.98■□□□□ 0.95
COL27A1-201ENST00000356083 TEX35Q5T0J7 233 aa20.98■□□□□ 0.95
COL27A1-201ENST00000356083 IFIT2P09913 472 aaKnown RBP20.97■□□□□ 0.95
COL27A1-201ENST00000356083 CAGE1Q8TC20 777 aa20.97■□□□□ 0.95
COL27A1-201ENST00000356083 SF3B2Q13435 895 aaKnown RBP20.97■□□□□ 0.95
COL27A1-201ENST00000356083 STK11IPQ8N1F8 1099 aa20.97■□□□□ 0.95
COL27A1-201ENST00000356083 CCDC173Q0VFZ6 552 aa20.96■□□□□ 0.95
COL27A1-201ENST00000356083 CENPJQ9HC77 1338 aaPredicted RBP20.96■□□□□ 0.95
COL27A1-201ENST00000356083 KIF3BO15066 747 aa20.96■□□□□ 0.95
COL27A1-201ENST00000356083 ATP6V1DQ9Y5K8 247 aa20.95■□□□□ 0.94
COL27A1-201ENST00000356083 AIMP1Q12904 312 aaKnown RBP20.95■□□□□ 0.94
COL27A1-201ENST00000356083 WASHC2CQ9Y4E1 1318 aa20.95■□□□□ 0.94
COL27A1-201ENST00000356083 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
COL27A1-201ENST00000356083 NEUROD6Q96NK8 337 aa20.94■□□□□ 0.94
COL27A1-201ENST00000356083 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
COL27A1-201ENST00000356083 VPS37CA5D8V6 355 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-201ENST00000356083 CHMP4BP1P59074 171 aa20.93■□□□□ 0.94
COL27A1-201ENST00000356083 SAFBQ15424 915 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL27A1-201ENST00000356083 BRPF1P55201 1214 aaPredicted RBP20.92■□□□□ 0.94
COL27A1-201ENST00000356083 RDXP35241 583 aaKnown RBP20.92■□□□□ 0.94
COL27A1-201ENST00000356083 CDR1P51861 262 aa20.92■□□□□ 0.94
COL27A1-201ENST00000356083 WASHC4Q2M389 1173 aa20.92■□□□□ 0.94
COL27A1-201ENST00000356083 SYCP1Q15431 976 aa20.91■□□□□ 0.94
COL27A1-201ENST00000356083 MYCNP04198 464 aaPredicted RBP20.91■□□□□ 0.94
COL27A1-201ENST00000356083 SASS6Q6UVJ0 657 aa20.91■□□□□ 0.94
COL27A1-201ENST00000356083 ZKSCAN1P17029 563 aaPredicted RBP20.91■□□□□ 0.94
COL27A1-201ENST00000356083 SEPT7Q16181 437 aaKnown RBP20.9■□□□□ 0.94
COL27A1-201ENST00000356083 RUFY2Q8WXA3 655 aa20.9■□□□□ 0.94
COL27A1-201ENST00000356083 CCDC191Q8NCU4 936 aa20.9■□□□□ 0.94
COL27A1-201ENST00000356083 ATP2B1P20020 1258 aa20.89■□□□□ 0.94
COL27A1-201ENST00000356083 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.94
COL27A1-201ENST00000356083 CEP162Q5TB80 1403 aa20.89■□□□□ 0.93
COL27A1-201ENST00000356083 CHMP4CQ96CF2 233 aa20.88■□□□□ 0.93
COL27A1-201ENST00000356083 H0YHG0 523 aa20.88■□□□□ 0.93
COL27A1-201ENST00000356083 ZHX3Q9H4I2 956 aa20.88■□□□□ 0.93
COL27A1-201ENST00000356083 DDX11L8A8MPP1 907 aa20.87■□□□□ 0.93
COL27A1-201ENST00000356083 COG3Q96JB2 828 aa20.87■□□□□ 0.93
COL27A1-201ENST00000356083 SPDYE4A6NLX3 237 aa20.87■□□□□ 0.93
COL27A1-201ENST00000356083 MATR3P43243 847 aaKnown RBP eCLIP20.87■□□□□ 0.939e-7■■□□□ 11.7
COL27A1-201ENST00000356083 G3BP1Q13283 466 aaKnown RBP eCLIP20.87■□□□□ 0.93
COL27A1-201ENST00000356083 FAM13BQ9NYF5 915 aa20.87■□□□□ 0.93
COL27A1-201ENST00000356083 RALYLQ86SE5 291 aaKnown RBP20.87■□□□□ 0.93
COL27A1-201ENST00000356083 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.931e-6■■■□□ 16.9
COL27A1-201ENST00000356083 CDK5RAP3Q96JB5 506 aa20.87■□□□□ 0.93
COL27A1-201ENST00000356083 IFT57Q9NWB7 429 aa20.86■□□□□ 0.93
COL27A1-201ENST00000356083 NUTM2GQ5VZR2 741 aa20.86■□□□□ 0.93
COL27A1-201ENST00000356083 BRMS1Q9HCU9 246 aa20.86■□□□□ 0.93
COL27A1-201ENST00000356083 RBM5P52756 815 aaKnown RBP eCLIP20.85■□□□□ 0.933e-7■■■□□ 16.5
COL27A1-201ENST00000356083 ZRSR2Q15696 482 aaKnown RBP20.85■□□□□ 0.93
COL27A1-201ENST00000356083 RIC3Q7Z5B4 369 aa20.85■□□□□ 0.93
COL27A1-201ENST00000356083 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
COL27A1-201ENST00000356083 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
COL27A1-201ENST00000356083 ENOX2Q16206 610 aaKnown RBP20.84■□□□□ 0.93
COL27A1-201ENST00000356083 KRT18P05783 430 aaKnown RBP20.84■□□□□ 0.93
COL27A1-201ENST00000356083 PDCL3Q9H2J4 239 aa20.84■□□□□ 0.93
COL27A1-201ENST00000356083 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
COL27A1-201ENST00000356083 DDX58O95786 925 aaKnown RBP20.83■□□□□ 0.93
COL27A1-201ENST00000356083 MNS1Q8NEH6 495 aa20.83■□□□□ 0.93
COL27A1-201ENST00000356083 RB1CC1Q8TDY2 1594 aa20.83■□□□□ 0.93
COL27A1-201ENST00000356083 OLFM4Q6UX06 510 aa20.82■□□□□ 0.92
COL27A1-201ENST00000356083 HSP90B2PQ58FF3 399 aa20.82■□□□□ 0.92
COL27A1-201ENST00000356083 TIMELESSQ9UNS1 1208 aa20.82■□□□□ 0.92
COL27A1-201ENST00000356083 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
COL27A1-201ENST00000356083 NEBLO76041 1014 aa20.81■□□□□ 0.92
COL27A1-201ENST00000356083 DCTN1Q14203 1278 aa20.81■□□□□ 0.92
COL27A1-201ENST00000356083 MYO6Q9UM54 1294 aa20.81■□□□□ 0.92
COL27A1-201ENST00000356083 PAXIP1Q6ZW49 1069 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-201ENST00000356083 FKBP5Q13451 457 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-201ENST00000356083 FAM161AQ3B820 660 aa20.8■□□□□ 0.92
COL27A1-201ENST00000356083 NUP155O75694 1391 aa20.79■□□□□ 0.92
COL27A1-201ENST00000356083 SMC3Q9UQE7 1217 aa20.79■□□□□ 0.92
COL27A1-201ENST00000356083 ATF3P18847 181 aa20.79■□□□□ 0.92
COL27A1-201ENST00000356083 HSP90AB3PQ58FF7 597 aa20.79■□□□□ 0.92
COL27A1-201ENST00000356083 CGNL1Q0VF96 1302 aa20.78■□□□□ 0.92
COL27A1-201ENST00000356083 XBP1P17861 261 aa20.78■□□□□ 0.92
COL27A1-201ENST00000356083 PSMD1Q99460 953 aa20.78■□□□□ 0.92
COL27A1-201ENST00000356083 MPHOSPH10O00566 681 aaKnown RBP20.78■□□□□ 0.92
COL27A1-201ENST00000356083 RALBP1Q15311 655 aa20.77■□□□□ 0.92
COL27A1-201ENST00000356083 MINK1Q8N4C8 1332 aaPredicted RBP20.77■□□□□ 0.92
COL27A1-201ENST00000356083 FMNL2Q96PY5 1086 aa20.77■□□□□ 0.92
COL27A1-201ENST00000356083 TMEM87AQ8NBN3 555 aa20.77■□□□□ 0.92
COL27A1-201ENST00000356083 CENPHQ9H3R5 247 aa20.77■□□□□ 0.91
COL27A1-201ENST00000356083 NOM1Q5C9Z4 860 aaKnown RBP20.76■□□□□ 0.91
COL27A1-201ENST00000356083 PLCD3Q8N3E9 789 aa20.76■□□□□ 0.91
COL27A1-201ENST00000356083 TSPYL1Q9H0U9 437 aa20.76■□□□□ 0.91
COL27A1-201ENST00000356083 NUTM2BA6NNL0 878 aaPredicted RBP20.75■□□□□ 0.91
COL27A1-201ENST00000356083 NUTM2EB1AL46 878 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms