RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
FN1-203ENST00000354785 PSME1Q06323 249 aa13.53□□□□□ -0.24
FN1-203ENST00000354785 CCDC34Q96HJ3 373 aa13.53□□□□□ -0.24
FN1-203ENST00000354785 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
FN1-203ENST00000354785 GOLGA6L3A6NEY3 463 aa13.53□□□□□ -0.24
FN1-203ENST00000354785 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.24
FN1-203ENST00000354785 C9orf78Q9NZ63 289 aaPredicted RBP13.52□□□□□ -0.24
FN1-203ENST00000354785 PCF11O94913 1555 aaKnown RBP13.52□□□□□ -0.24
FN1-203ENST00000354785 IQGAP2Q13576 1575 aa13.52□□□□□ -0.24
FN1-203ENST00000354785 G3V3G9 751 aa13.52□□□□□ -0.25
FN1-203ENST00000354785 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
FN1-203ENST00000354785 KIF7Q2M1P5 1343 aa13.52□□□□□ -0.25
FN1-203ENST00000354785 RIPK4P57078 832 aa13.52□□□□□ -0.25
FN1-203ENST00000354785 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.25
FN1-203ENST00000354785 DIAPH1O60610 1272 aaKnown RBP13.51□□□□□ -0.25
FN1-203ENST00000354785 FOXD4L5Q5VV16 416 aaPredicted RBP13.51□□□□□ -0.25
FN1-203ENST00000354785 FOXD4L4Q8WXT5 416 aaPredicted RBP13.51□□□□□ -0.25
FN1-203ENST00000354785 TPM4P67936 248 aa13.51□□□□□ -0.25
FN1-203ENST00000354785 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
FN1-203ENST00000354785 FAM69CQ0P6D2 419 aa13.51□□□□□ -0.25
FN1-203ENST00000354785 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
FN1-203ENST00000354785 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
FN1-203ENST00000354785 PDE4AP27815 886 aa13.5□□□□□ -0.25
FN1-203ENST00000354785 NEXNQ0ZGT2 675 aa13.5□□□□□ -0.25
FN1-203ENST00000354785 DDX19BQ9UMR2 479 aa13.5□□□□□ -0.25
FN1-203ENST00000354785 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
FN1-203ENST00000354785 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
FN1-203ENST00000354785 C9orf84Q5VXU9 1444 aa13.5□□□□□ -0.25
FN1-203ENST00000354785 ROCK1Q13464 1354 aa13.49□□□□□ -0.25
FN1-203ENST00000354785 EIF2S2P20042 333 aaKnown RBP13.49□□□□□ -0.25
FN1-203ENST00000354785 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
FN1-203ENST00000354785 KIF14Q15058 1648 aa13.49□□□□□ -0.25
FN1-203ENST00000354785 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
FN1-203ENST00000354785 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
FN1-203ENST00000354785 TOMM22Q9NS69 142 aa13.49□□□□□ -0.25
FN1-203ENST00000354785 RASSF8Q8NHQ8 419 aa13.48□□□□□ -0.25
FN1-203ENST00000354785 DDX11L8A8MPP1 907 aa13.48□□□□□ -0.25
FN1-203ENST00000354785 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
FN1-203ENST00000354785 H3BQV1 296 aa13.48□□□□□ -0.25
FN1-203ENST00000354785 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
FN1-203ENST00000354785 HMOX1P09601 288 aa13.47□□□□□ -0.25
FN1-203ENST00000354785 FOXD4L6Q3SYB3 417 aaPredicted RBP13.47□□□□□ -0.25
FN1-203ENST00000354785 FOXD4L3Q6VB84 417 aaPredicted RBP13.47□□□□□ -0.25
FN1-203ENST00000354785 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
FN1-203ENST00000354785 CREBRFQ8IUR6 639 aa13.46□□□□□ -0.25
FN1-203ENST00000354785 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.25
FN1-203ENST00000354785 PRG4Q92954 1404 aaPredicted RBP13.46□□□□□ -0.25
FN1-203ENST00000354785 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.26
FN1-203ENST00000354785 SF3A1Q15459 793 aaKnown RBP13.46□□□□□ -0.26
FN1-203ENST00000354785 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.26
FN1-203ENST00000354785 DIAPH3Q9NSV4 1193 aa13.46□□□□□ -0.26
FN1-203ENST00000354785 REC8O95072 547 aa13.45□□□□□ -0.26
FN1-203ENST00000354785 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
FN1-203ENST00000354785 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
FN1-203ENST00000354785 TMEM132EQ6IEE7 984 aa13.45□□□□□ -0.26
FN1-203ENST00000354785 ARID3AQ99856 593 aa13.45□□□□□ -0.26
FN1-203ENST00000354785 LRRFIP1Q32MZ4 808 aaKnown RBP13.44□□□□□ -0.26
FN1-203ENST00000354785 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
FN1-203ENST00000354785 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
FN1-203ENST00000354785 SLC4A3P48751 1232 aa13.44□□□□□ -0.26
FN1-203ENST00000354785 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
FN1-203ENST00000354785 USP35Q9P2H5 1018 aa13.44□□□□□ -0.26
FN1-203ENST00000354785 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
FN1-203ENST00000354785 FKBP5Q13451 457 aaPredicted RBP13.43□□□□□ -0.26
FN1-203ENST00000354785 FAM184AQ8NB25 1140 aa13.43□□□□□ -0.26
FN1-203ENST00000354785 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
FN1-203ENST00000354785 IFT140Q96RY7 1462 aa13.43□□□□□ -0.26
FN1-203ENST00000354785 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
FN1-203ENST00000354785 AFAP1Q8N556 730 aa13.43□□□□□ -0.26
FN1-203ENST00000354785 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
FN1-203ENST00000354785 BRD4O60885 1362 aaPredicted RBP13.43□□□□□ -0.26
FN1-203ENST00000354785 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
FN1-203ENST00000354785 RUFY2Q8WXA3 655 aa13.41□□□□□ -0.26
FN1-203ENST00000354785 DDX58O95786 925 aaKnown RBP13.41□□□□□ -0.26
FN1-203ENST00000354785 PLEKHH2Q8IVE3 1493 aa13.41□□□□□ -0.26
FN1-203ENST00000354785 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
FN1-203ENST00000354785 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
FN1-203ENST00000354785 DDX49Q9Y6V7 483 aaKnown RBP13.4□□□□□ -0.26
FN1-203ENST00000354785 MCTP1Q6DN14 999 aa13.4□□□□□ -0.26
FN1-203ENST00000354785 VPS53Q5VIR6 699 aa13.4□□□□□ -0.26
FN1-203ENST00000354785 IFIT2P09913 472 aaKnown RBP13.4□□□□□ -0.26
FN1-203ENST00000354785 MTHFSP49914 203 aa13.4□□□□□ -0.26
FN1-203ENST00000354785 ATF3P18847 181 aa13.39□□□□□ -0.27
FN1-203ENST00000354785 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
FN1-203ENST00000354785 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
FN1-203ENST00000354785 AKAP17AQ02040 695 aaKnown RBP13.39□□□□□ -0.27
FN1-203ENST00000354785 API5Q9BZZ5 524 aaKnown RBP13.39□□□□□ -0.27
FN1-203ENST00000354785 GGNBP2Q9H3C7 697 aa13.39□□□□□ -0.27
FN1-203ENST00000354785 GNAI1P63096 354 aa13.39□□□□□ -0.27
FN1-203ENST00000354785 NUTM2GQ5VZR2 741 aa13.39□□□□□ -0.27
FN1-203ENST00000354785 VPS37DQ86XT2 251 aa13.39□□□□□ -0.27
FN1-203ENST00000354785 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
FN1-203ENST00000354785 EPRSP07814 1512 aaKnown RBP13.38□□□□□ -0.27
FN1-203ENST00000354785 HFM1A2PYH4 1435 aa13.38□□□□□ -0.27
FN1-203ENST00000354785 APPP05067 770 aa13.38□□□□□ -0.27
FN1-203ENST00000354785 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
FN1-203ENST00000354785 PES1O00541 588 aaKnown RBP13.38□□□□□ -0.27
FN1-203ENST00000354785 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
FN1-203ENST00000354785 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
FN1-203ENST00000354785 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms