RNA–Protein interactions for RNA: ENST00000353170.9

KLHDC4-204, Transcript of kelch domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KLHDC4, Length 1,663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-204ENST00000353170 NRXN1Q9ULB1 1477 aa28.55■■■□□ 2.16
KLHDC4-204ENST00000353170 PPLO60437 1756 aa28.55■■■□□ 2.16
KLHDC4-204ENST00000353170 ST20-MTHFSA0A0A6YYL1 179 aa28.54■■■□□ 2.16
KLHDC4-204ENST00000353170 C11orf95C9JLR9 678 aaPredicted RBP28.52■■■□□ 2.16
KLHDC4-204ENST00000353170 SPATA31D1Q6ZQQ2 1576 aa28.52■■■□□ 2.16
KLHDC4-204ENST00000353170 IDI1Q13907 227 aa28.51■■■□□ 2.15
KLHDC4-204ENST00000353170 SCAF11Q99590 1463 aaKnown RBP28.48■■■□□ 2.15
KLHDC4-204ENST00000353170 EIF3AQ14152 1382 aaKnown RBP28.48■■■□□ 2.15
KLHDC4-204ENST00000353170 ADGRF5Q8IZF2 1346 aa28.48■■■□□ 2.15
KLHDC4-204ENST00000353170 IQGAP1P46940 1657 aa28.48■■■□□ 2.15
KLHDC4-204ENST00000353170 VGFO15240 615 aaPredicted RBP28.47■■■□□ 2.15
KLHDC4-204ENST00000353170 TMEM131LA2VDJ0 1609 aa28.45■■■□□ 2.15
KLHDC4-204ENST00000353170 NEXMIFQ5QGS0 1516 aa28.45■■■□□ 2.14
KLHDC4-204ENST00000353170 FBXO31Q5XUX0 539 aaPredicted RBP28.45■■■□□ 2.14
KLHDC4-204ENST00000353170 ZMYM3Q14202 1370 aa28.45■■■□□ 2.14
KLHDC4-204ENST00000353170 SETBP1Q9Y6X0 1596 aa28.44■■■□□ 2.14
KLHDC4-204ENST00000353170 PIK3C2GO75747 1445 aa28.43■■■□□ 2.14
KLHDC4-204ENST00000353170 ZFYVE9O95405 1425 aa28.43■■■□□ 2.14
KLHDC4-204ENST00000353170 SLC24A1O60721 1099 aa28.42■■■□□ 2.14
KLHDC4-204ENST00000353170 STAG3Q9UJ98 1225 aa28.4■■■□□ 2.14
KLHDC4-204ENST00000353170 CCER2I3L3R5 266 aa28.39■■■□□ 2.14
KLHDC4-204ENST00000353170 CFAP70Q5T0N1 1121 aa28.39■■■□□ 2.14
KLHDC4-204ENST00000353170 TMF1P82094 1093 aa28.38■■■□□ 2.13
KLHDC4-204ENST00000353170 POLR3GLQ9BT43 218 aa28.37■■■□□ 2.13
KLHDC4-204ENST00000353170 C14orf93Q9H972 538 aaKnown RBP28.36■■■□□ 2.13
KLHDC4-204ENST00000353170 MYO5BQ9ULV0 1848 aa28.36■■■□□ 2.13
KLHDC4-204ENST00000353170 CENPBP07199 599 aaPredicted RBP28.35■■■□□ 2.13
KLHDC4-204ENST00000353170 TESK2Q96S53 571 aa28.35■■■□□ 2.13
KLHDC4-204ENST00000353170 CDCA8Q53HL2 280 aa28.32■■■□□ 2.12
KLHDC4-204ENST00000353170 TNRQ92752 1358 aa28.32■■■□□ 2.12
KLHDC4-204ENST00000353170 A2ML1A8K2U0 1454 aa28.29■■■□□ 2.12
KLHDC4-204ENST00000353170 KDM5AP29375 1690 aaKnown RBP28.28■■■□□ 2.12
KLHDC4-204ENST00000353170 FER1L4A9Z1Z3 1794 aa28.27■■■□□ 2.12
KLHDC4-204ENST00000353170 MYO3AQ8NEV4 1616 aa28.27■■■□□ 2.12
KLHDC4-204ENST00000353170 ADGRB1O14514 1584 aa28.27■■■□□ 2.12
KLHDC4-204ENST00000353170 YTHDC1Q96MU7 727 aaKnown RBP28.25■■■□□ 2.11
KLHDC4-204ENST00000353170 DISP3Q9P2K9 1392 aa28.25■■■□□ 2.11
KLHDC4-204ENST00000353170 HDGFP51858 240 aaKnown RBP28.23■■■□□ 2.11
KLHDC4-204ENST00000353170 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.23■■■□□ 2.11
KLHDC4-204ENST00000353170 SBNO2Q9Y2G9 1366 aa28.23■■■□□ 2.11
KLHDC4-204ENST00000353170 NLRP1Q9C000 1473 aa28.22■■■□□ 2.11
KLHDC4-204ENST00000353170 NUTM2DQ5VT03 806 aaPredicted RBP28.22■■■□□ 2.11
KLHDC4-204ENST00000353170 RIMS2Q9UQ26 1411 aa28.22■■■□□ 2.11
KLHDC4-204ENST00000353170 PRKRIP1Q9H875 184 aaPredicted RBP28.19■■■□□ 2.1
KLHDC4-204ENST00000353170 C3P01024 1663 aa28.19■■■□□ 2.1
KLHDC4-204ENST00000353170 CENPJQ9HC77 1338 aaPredicted RBP28.19■■■□□ 2.1
KLHDC4-204ENST00000353170 KTN1Q86UP2 1357 aaKnown RBP28.14■■■□□ 2.1
KLHDC4-204ENST00000353170 TRAK1Q9UPV9 953 aa28.14■■■□□ 2.1
KLHDC4-204ENST00000353170 TMEM132EQ6IEE7 984 aa28.13■■■□□ 2.09
KLHDC4-204ENST00000353170 UBR1Q8IWV7 1749 aa28.13■■■□□ 2.09
KLHDC4-204ENST00000353170 ALKQ9UM73 1620 aa28.12■■■□□ 2.09
KLHDC4-204ENST00000353170 QRICH2Q9H0J4 1663 aa28.11■■■□□ 2.09
KLHDC4-204ENST00000353170 ARHGEF28Q8N1W1 1705 aaKnown RBP28.09■■■□□ 2.09
KLHDC4-204ENST00000353170 TMEM2Q9UHN6 1383 aa28.08■■■□□ 2.09
KLHDC4-204ENST00000353170 ASXL1Q8IXJ9 1541 aa28.07■■■□□ 2.08
KLHDC4-204ENST00000353170 CEBPAP49715 358 aaPredicted RBP28.07■■■□□ 2.08
KLHDC4-204ENST00000353170 YTHDC2Q9H6S0 1430 aaKnown RBP28.05■■■□□ 2.08
KLHDC4-204ENST00000353170 RALBP1Q15311 655 aa28.04■■■□□ 2.08
KLHDC4-204ENST00000353170 PANK3Q9H999 370 aa28.03■■■□□ 2.08
KLHDC4-204ENST00000353170 RIMS1Q86UR5 1692 aaKnown RBP28.01■■■□□ 2.08
KLHDC4-204ENST00000353170 PUS7Q96PZ0 661 aaKnown RBP28.01■■■□□ 2.07
KLHDC4-204ENST00000353170 ADAMTSL3P82987 1691 aa27.99■■■□□ 2.07
KLHDC4-204ENST00000353170 PER1O15534 1290 aaPredicted RBP27.99■■■□□ 2.07
KLHDC4-204ENST00000353170 EVC2Q86UK5 1308 aa27.99■■■□□ 2.07
KLHDC4-204ENST00000353170 MYOM1P52179 1685 aa27.99■■■□□ 2.07
KLHDC4-204ENST00000353170 DLC1Q96QB1 1528 aa27.98■■■□□ 2.07
KLHDC4-204ENST00000353170 SETD1AO15047 1707 aaKnown RBP27.98■■■□□ 2.07
KLHDC4-204ENST00000353170 STK26Q9P289 416 aa27.97■■■□□ 2.07
KLHDC4-204ENST00000353170 EID1Q9Y6B2 187 aa27.97■■■□□ 2.07
KLHDC4-204ENST00000353170 MRS2Q9HD23 443 aa27.97■■■□□ 2.07
KLHDC4-204ENST00000353170 LRPPRCP42704 1394 aaKnown RBP27.97■■■□□ 2.07
KLHDC4-204ENST00000353170 PTPRMP28827 1452 aa27.96■■■□□ 2.07
KLHDC4-204ENST00000353170 NRXN3Q9Y4C0 1643 aa27.96■■■□□ 2.07
KLHDC4-204ENST00000353170 THEMISQ8N1K5 641 aaPredicted RBP27.96■■■□□ 2.07
KLHDC4-204ENST00000353170 SLIT1O75093 1534 aa27.96■■■□□ 2.07
KLHDC4-204ENST00000353170 KNSTRNQ9Y448 316 aa27.95■■■□□ 2.07
KLHDC4-204ENST00000353170 PLEKHG1Q9ULL1 1385 aa27.94■■■□□ 2.06
KLHDC4-204ENST00000353170 POGKQ9P215 609 aa27.94■■■□□ 2.06
KLHDC4-204ENST00000353170 MYBBP1AQ9BQG0 1328 aaKnown RBP27.94■■■□□ 2.06
KLHDC4-204ENST00000353170 PLPPR3Q6T4P5 718 aa27.94■■■□□ 2.06
KLHDC4-204ENST00000353170 ARHGAP23Q9P227 1491 aa27.93■■■□□ 2.06
KLHDC4-204ENST00000353170 ABCC11Q96J66 1382 aa27.92■■■□□ 2.06
KLHDC4-204ENST00000353170 BCANQ96GW7 911 aa27.92■■■□□ 2.06
KLHDC4-204ENST00000353170 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
KLHDC4-204ENST00000353170 PARD3Q8TEW0 1356 aa27.92■■■□□ 2.06
KLHDC4-204ENST00000353170 TXNDC2Q86VQ3 553 aa27.9■■■□□ 2.06
KLHDC4-204ENST00000353170 PRAM1Q96QH2 718 aa27.9■■■□□ 2.06
KLHDC4-204ENST00000353170 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.06
KLHDC4-204ENST00000353170 CEP170BQ9Y4F5 1589 aaPredicted RBP27.88■■■□□ 2.05
KLHDC4-204ENST00000353170 TULP4Q9NRJ4 1543 aa27.88■■■□□ 2.05
KLHDC4-204ENST00000353170 BRD4O60885 1362 aaPredicted RBP27.87■■■□□ 2.05
KLHDC4-204ENST00000353170 NPC1L1Q9UHC9 1359 aa27.87■■■□□ 2.05
KLHDC4-204ENST00000353170 KNDC1Q76NI1 1749 aa27.87■■■□□ 2.05
KLHDC4-204ENST00000353170 NINLQ9Y2I6 1382 aa27.87■■■□□ 2.05
KLHDC4-204ENST00000353170 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
KLHDC4-204ENST00000353170 NLRP13Q86W25 1043 aa27.84■■■□□ 2.05
KLHDC4-204ENST00000353170 TMC1Q8TDI8 760 aa27.84■■■□□ 2.05
KLHDC4-204ENST00000353170 TECPR2O15040 1411 aa27.84■■■□□ 2.05
KLHDC4-204ENST00000353170 METP08581 1390 aa27.83■■■□□ 2.05
KLHDC4-204ENST00000353170 ATAD2Q6PL18 1390 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms