RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RWDD1Q9H446 243 aaPredicted RBP17.35■□□□□ 0.37
SMC6-201ENST00000351948 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
SMC6-201ENST00000351948 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
SMC6-201ENST00000351948 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
SMC6-201ENST00000351948 RBM33Q96EV2 1170 aaKnown RBP17.33■□□□□ 0.37
SMC6-201ENST00000351948 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.36
SMC6-201ENST00000351948 CDK19Q9BWU1 502 aa17.33■□□□□ 0.36
SMC6-201ENST00000351948 HSP90AB1P08238 724 aaKnown RBP17.32■□□□□ 0.36
SMC6-201ENST00000351948 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
SMC6-201ENST00000351948 ADAMTS8Q9UP79 889 aa17.31■□□□□ 0.36
SMC6-201ENST00000351948 COG6Q9Y2V7 657 aa17.31■□□□□ 0.36
SMC6-201ENST00000351948 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
SMC6-201ENST00000351948 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
SMC6-201ENST00000351948 TAF7LQ5H9L4 462 aa17.3■□□□□ 0.36
SMC6-201ENST00000351948 E9PSI1 815 aa17.29■□□□□ 0.36
SMC6-201ENST00000351948 KIF14Q15058 1648 aa17.29■□□□□ 0.36
SMC6-201ENST00000351948 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
SMC6-201ENST00000351948 WAPLQ7Z5K2 1190 aa17.29■□□□□ 0.36
SMC6-201ENST00000351948 EXOC6Q8TAG9 804 aa17.29■□□□□ 0.36
SMC6-201ENST00000351948 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
SMC6-201ENST00000351948 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
SMC6-201ENST00000351948 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
SMC6-201ENST00000351948 GOLGA6L22H0YM25 854 aa17.27■□□□□ 0.36
SMC6-201ENST00000351948 GORABQ5T7V8 394 aa17.27■□□□□ 0.36
SMC6-201ENST00000351948 FANCAO15360 1455 aa17.27■□□□□ 0.35
SMC6-201ENST00000351948 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
SMC6-201ENST00000351948 TULP1O00294 542 aaPredicted RBP17.26■□□□□ 0.35
SMC6-201ENST00000351948 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
SMC6-201ENST00000351948 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
SMC6-201ENST00000351948 TRIM6-TRIM34B2RNG4 842 aa17.26■□□□□ 0.35
SMC6-201ENST00000351948 IDI1Q13907 227 aa17.26■□□□□ 0.35
SMC6-201ENST00000351948 MEX3CQ5U5Q3 659 aaKnown RBP17.26■□□□□ 0.35
SMC6-201ENST00000351948 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
SMC6-201ENST00000351948 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
SMC6-201ENST00000351948 PPP2R1AP30153 589 aa17.25■□□□□ 0.35
SMC6-201ENST00000351948 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
SMC6-201ENST00000351948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.24■□□□□ 0.356e-7■■■□□ 19.2
SMC6-201ENST00000351948 ISY1Q9ULR0 285 aaKnown RBP17.24■□□□□ 0.35
SMC6-201ENST00000351948 ATP10BO94823 1461 aa17.24■□□□□ 0.35
SMC6-201ENST00000351948 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
SMC6-201ENST00000351948 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
SMC6-201ENST00000351948 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
SMC6-201ENST00000351948 RBM19Q9Y4C8 960 aaKnown RBP17.23■□□□□ 0.35
SMC6-201ENST00000351948 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
SMC6-201ENST00000351948 ZKSCAN2Q63HK3 967 aa17.23■□□□□ 0.35
SMC6-201ENST00000351948 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
SMC6-201ENST00000351948 GPRASP1Q5JY77 1395 aa17.22■□□□□ 0.35
SMC6-201ENST00000351948 POGZQ7Z3K3 1410 aa17.22■□□□□ 0.35
SMC6-201ENST00000351948 HMMRO75330 724 aa17.22■□□□□ 0.35
SMC6-201ENST00000351948 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
SMC6-201ENST00000351948 MSH5O43196 834 aa17.22■□□□□ 0.35
SMC6-201ENST00000351948 ADGRF5Q8IZF2 1346 aa17.22■□□□□ 0.35
SMC6-201ENST00000351948 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
SMC6-201ENST00000351948 TCP11L2Q8N4U5 519 aa17.21■□□□□ 0.35
SMC6-201ENST00000351948 TSPYL4Q9UJ04 414 aa17.21■□□□□ 0.35
SMC6-201ENST00000351948 KIAA1211Q6ZU35 1233 aa17.21■□□□□ 0.35
SMC6-201ENST00000351948 HSCBQ8IWL3 235 aa17.21■□□□□ 0.35
SMC6-201ENST00000351948 AKNAQ7Z591 1439 aa17.21■□□□□ 0.35
SMC6-201ENST00000351948 PRKAR2BP31323 418 aa17.21■□□□□ 0.35
SMC6-201ENST00000351948 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
SMC6-201ENST00000351948 NOP58Q9Y2X3 529 aaKnown RBP17.21■□□□□ 0.35
SMC6-201ENST00000351948 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
SMC6-201ENST00000351948 GPATCH8Q9UKJ3 1502 aaKnown RBP17.2■□□□□ 0.34
SMC6-201ENST00000351948 RRS1Q15050 365 aaKnown RBP17.2■□□□□ 0.34
SMC6-201ENST00000351948 ASXL2Q76L83 1435 aa17.2■□□□□ 0.34
SMC6-201ENST00000351948 RTEL1-TNFRSF6BF6WH68 1400 aa17.19■□□□□ 0.34
SMC6-201ENST00000351948 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
SMC6-201ENST00000351948 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
SMC6-201ENST00000351948 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
SMC6-201ENST00000351948 MCCP23508 829 aa17.18■□□□□ 0.34
SMC6-201ENST00000351948 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
SMC6-201ENST00000351948 C11orf95C9JLR9 678 aaPredicted RBP17.18■□□□□ 0.34
SMC6-201ENST00000351948 NUTM2BA6NNL0 878 aaPredicted RBP17.18■□□□□ 0.34
SMC6-201ENST00000351948 NUTM2EB1AL46 878 aaPredicted RBP17.18■□□□□ 0.34
SMC6-201ENST00000351948 NUTM2AQ8IVF1 878 aaPredicted RBP17.18■□□□□ 0.34
SMC6-201ENST00000351948 ANKRD45Q5TZF3 282 aa17.17■□□□□ 0.34
SMC6-201ENST00000351948 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
SMC6-201ENST00000351948 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
SMC6-201ENST00000351948 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
SMC6-201ENST00000351948 SLKQ9H2G2 1235 aaPredicted RBP17.17■□□□□ 0.34
SMC6-201ENST00000351948 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
SMC6-201ENST00000351948 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
SMC6-201ENST00000351948 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
SMC6-201ENST00000351948 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
SMC6-201ENST00000351948 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
SMC6-201ENST00000351948 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
SMC6-201ENST00000351948 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
SMC6-201ENST00000351948 FRAT2O75474 233 aaPredicted RBP17.14■□□□□ 0.33
SMC6-201ENST00000351948 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
SMC6-201ENST00000351948 PANK1Q8TE04 598 aa17.14■□□□□ 0.33
SMC6-201ENST00000351948 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
SMC6-201ENST00000351948 ZC3H6P61129 1189 aaKnown RBP17.13■□□□□ 0.33
SMC6-201ENST00000351948 RAPGEF6Q8TEU7 1601 aa17.13■□□□□ 0.33
SMC6-201ENST00000351948 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
SMC6-201ENST00000351948 GNAI1P63096 354 aa17.13■□□□□ 0.33
SMC6-201ENST00000351948 DZIP1LQ8IYY4 767 aaKnown RBP17.13■□□□□ 0.33
SMC6-201ENST00000351948 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
SMC6-201ENST00000351948 NEXNQ0ZGT2 675 aa17.12■□□□□ 0.33
SMC6-201ENST00000351948 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
SMC6-201ENST00000351948 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms