RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 NEURL4Q96JN8 1562 aa20.41■□□□□ 0.86
SEC13-202ENST00000350697 LTKP29376 864 aa20.41■□□□□ 0.86
SEC13-202ENST00000350697 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
SEC13-202ENST00000350697 MED14O60244 1454 aa20.4■□□□□ 0.86
SEC13-202ENST00000350697 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.39■□□□□ 0.85
SEC13-202ENST00000350697 NPHP4O75161 1426 aaPredicted RBP20.38■□□□□ 0.85
SEC13-202ENST00000350697 SPATA31E1Q6ZUB1 1445 aa20.38■□□□□ 0.85
SEC13-202ENST00000350697 IQGAP1P46940 1657 aa20.36■□□□□ 0.85
SEC13-202ENST00000350697 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
SEC13-202ENST00000350697 RPGRIP1LQ68CZ1 1315 aa20.35■□□□□ 0.85
SEC13-202ENST00000350697 NEXMIFQ5QGS0 1516 aa20.34■□□□□ 0.85
SEC13-202ENST00000350697 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
SEC13-202ENST00000350697 NUTM2DQ5VT03 806 aaPredicted RBP20.33■□□□□ 0.84
SEC13-202ENST00000350697 PLEKHG1Q9ULL1 1385 aa20.33■□□□□ 0.84
SEC13-202ENST00000350697 PPLO60437 1756 aa20.3■□□□□ 0.84
SEC13-202ENST00000350697 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
SEC13-202ENST00000350697 BCANQ96GW7 911 aa20.28■□□□□ 0.84
SEC13-202ENST00000350697 IFT172Q9UG01 1749 aa20.26■□□□□ 0.83
SEC13-202ENST00000350697 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
SEC13-202ENST00000350697 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
SEC13-202ENST00000350697 SLC26A8Q96RN1 970 aa20.24■□□□□ 0.83
SEC13-202ENST00000350697 SETBP1Q9Y6X0 1596 aa20.24■□□□□ 0.83
SEC13-202ENST00000350697 ADAMTS13Q76LX8 1427 aa20.23■□□□□ 0.83
SEC13-202ENST00000350697 DIP2AQ14689 1571 aa20.22■□□□□ 0.83
SEC13-202ENST00000350697 TBX22Q9Y458 520 aa20.22■□□□□ 0.83
SEC13-202ENST00000350697 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
SEC13-202ENST00000350697 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
SEC13-202ENST00000350697 NRXN3Q9Y4C0 1643 aa20.21■□□□□ 0.83
SEC13-202ENST00000350697 MYOM2P54296 1465 aa20.21■□□□□ 0.83
SEC13-202ENST00000350697 ADGRF5Q8IZF2 1346 aa20.21■□□□□ 0.83
SEC13-202ENST00000350697 STAC3Q96MF2 364 aa20.2■□□□□ 0.82
SEC13-202ENST00000350697 DCAF11Q8TEB1 546 aa20.19■□□□□ 0.82
SEC13-202ENST00000350697 CLSPNQ9HAW4 1339 aa20.18■□□□□ 0.82
SEC13-202ENST00000350697 LTBP4Q8N2S1 1624 aa20.18■□□□□ 0.82
SEC13-202ENST00000350697 NRXN1Q9ULB1 1477 aa20.17■□□□□ 0.82
SEC13-202ENST00000350697 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
SEC13-202ENST00000350697 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
SEC13-202ENST00000350697 KDM2AQ9Y2K7 1162 aa20.16■□□□□ 0.82
SEC13-202ENST00000350697 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
SEC13-202ENST00000350697 CCER1Q8TC90 406 aaPredicted RBP20.15■□□□□ 0.82
SEC13-202ENST00000350697 KCNA6P17658 529 aa20.14■□□□□ 0.81
SEC13-202ENST00000350697 CPS1P31327 1500 aa20.14■□□□□ 0.81
SEC13-202ENST00000350697 STRCP1A6NGW2 1772 aa20.14■□□□□ 0.81
SEC13-202ENST00000350697 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
SEC13-202ENST00000350697 L3MBTL2Q969R5 705 aa20.13■□□□□ 0.81
SEC13-202ENST00000350697 SETD1AO15047 1707 aaKnown RBP20.12■□□□□ 0.81
SEC13-202ENST00000350697 NWD1Q149M9 1564 aa20.12■□□□□ 0.81
SEC13-202ENST00000350697 METP08581 1390 aa20.12■□□□□ 0.81
SEC13-202ENST00000350697 C14orf93Q9H972 538 aaKnown RBP20.1■□□□□ 0.81
SEC13-202ENST00000350697 TONSLQ96HA7 1378 aa20.1■□□□□ 0.81
SEC13-202ENST00000350697 ILDR1Q86SU0 546 aaPredicted RBP20.1■□□□□ 0.81
SEC13-202ENST00000350697 LAMC1P11047 1609 aa20.09■□□□□ 0.81
SEC13-202ENST00000350697 CERKQ8TCT0 537 aa20.09■□□□□ 0.81
SEC13-202ENST00000350697 PTPRUQ92729 1446 aa20.09■□□□□ 0.81
SEC13-202ENST00000350697 NKTRP30414 1462 aaKnown RBP20.09■□□□□ 0.81
SEC13-202ENST00000350697 CFAP70Q5T0N1 1121 aa20.08■□□□□ 0.8
SEC13-202ENST00000350697 FBXO41Q8TF61 875 aa20.08■□□□□ 0.8
SEC13-202ENST00000350697 AMOTL2Q9Y2J4 779 aa20.08■□□□□ 0.8
SEC13-202ENST00000350697 PRAG1Q86YV5 1406 aa20.06■□□□□ 0.8
SEC13-202ENST00000350697 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
SEC13-202ENST00000350697 LRRC7Q96NW7 1537 aa20.06■□□□□ 0.8
SEC13-202ENST00000350697 PROSER2Q86WR7 435 aaPredicted RBP20.04■□□□□ 0.8
SEC13-202ENST00000350697 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
SEC13-202ENST00000350697 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
SEC13-202ENST00000350697 ASXL1Q8IXJ9 1541 aa20.03■□□□□ 0.8
SEC13-202ENST00000350697 KIAA1210Q9ULL0 1709 aa20.02■□□□□ 0.8
SEC13-202ENST00000350697 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.79
SEC13-202ENST00000350697 LRPPRCP42704 1394 aaKnown RBP20.01■□□□□ 0.79
SEC13-202ENST00000350697 TMEM94Q12767 1356 aa20.01■□□□□ 0.79
SEC13-202ENST00000350697 ADGRB1O14514 1584 aa20■□□□□ 0.79
SEC13-202ENST00000350697 YTHDC2Q9H6S0 1430 aaKnown RBP20■□□□□ 0.79
SEC13-202ENST00000350697 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
SEC13-202ENST00000350697 ABCC11Q96J66 1382 aa19.99■□□□□ 0.79
SEC13-202ENST00000350697 XIRP1Q702N8 1843 aaKnown RBP19.98■□□□□ 0.79
SEC13-202ENST00000350697 STK26Q9P289 416 aa19.98■□□□□ 0.79
SEC13-202ENST00000350697 TECPR2O15040 1411 aa19.97■□□□□ 0.79
SEC13-202ENST00000350697 NCOA3Q9Y6Q9 1424 aa19.97■□□□□ 0.79
SEC13-202ENST00000350697 RBM33Q96EV2 1170 aaKnown RBP19.97■□□□□ 0.79
SEC13-202ENST00000350697 KNDC1Q76NI1 1749 aa19.97■□□□□ 0.79
SEC13-202ENST00000350697 ROBO2Q9HCK4 1378 aa19.96■□□□□ 0.79
SEC13-202ENST00000350697 NBPF8Q3BBV2 869 aa19.95■□□□□ 0.78
SEC13-202ENST00000350697 TRPM1Q7Z4N2 1603 aa19.94■□□□□ 0.78
SEC13-202ENST00000350697 NBPF1Q3BBV0 1214 aa19.93■□□□□ 0.78
SEC13-202ENST00000350697 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
SEC13-202ENST00000350697 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
SEC13-202ENST00000350697 DLC1Q96QB1 1528 aa19.92■□□□□ 0.78
SEC13-202ENST00000350697 FAM135BQ49AJ0 1406 aa19.92■□□□□ 0.78
SEC13-202ENST00000350697 MSH6P52701 1360 aa19.91■□□□□ 0.78
SEC13-202ENST00000350697 TRAK1Q9UPV9 953 aa19.91■□□□□ 0.78
SEC13-202ENST00000350697 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
SEC13-202ENST00000350697 C19orf44Q9H6X5 657 aa19.9■□□□□ 0.78
SEC13-202ENST00000350697 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
SEC13-202ENST00000350697 RALGAPBQ86X10 1494 aa19.88■□□□□ 0.77
SEC13-202ENST00000350697 UBAP1LF5GYI3 381 aa19.88■□□□□ 0.77
SEC13-202ENST00000350697 WAPLQ7Z5K2 1190 aa19.88■□□□□ 0.77
SEC13-202ENST00000350697 TOM1O60784 492 aa19.87■□□□□ 0.77
SEC13-202ENST00000350697 GPRASP1Q5JY77 1395 aa19.87■□□□□ 0.77
SEC13-202ENST00000350697 PLEKHH1Q9ULM0 1364 aa19.87■□□□□ 0.77
SEC13-202ENST00000350697 NALCNQ8IZF0 1738 aa19.87■□□□□ 0.77
SEC13-202ENST00000350697 PRAM1Q96QH2 718 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms