RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 NBR1Q14596 966 aa22.14■■□□□ 1.13
PDAP1-201ENST00000350498 KNSTRNQ9Y448 316 aa22.14■■□□□ 1.13
PDAP1-201ENST00000350498 KIDINS220Q9ULH0 1771 aa22.13■■□□□ 1.13
PDAP1-201ENST00000350498 AMER1Q5JTC6 1135 aaPredicted RBP22.13■■□□□ 1.13
PDAP1-201ENST00000350498 RCAN3Q9UKA8 241 aa22.13■■□□□ 1.13
PDAP1-201ENST00000350498 VWDEQ8N2E2 1590 aa22.13■■□□□ 1.13
PDAP1-201ENST00000350498 SCAF11Q99590 1463 aaKnown RBP22.12■■□□□ 1.13
PDAP1-201ENST00000350498 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
PDAP1-201ENST00000350498 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
PDAP1-201ENST00000350498 NUTM2DQ5VT03 806 aaPredicted RBP22.1■■□□□ 1.13
PDAP1-201ENST00000350498 NOP58Q9Y2X3 529 aaKnown RBP22.1■■□□□ 1.13
PDAP1-201ENST00000350498 WASHC2CQ9Y4E1 1318 aa22.09■■□□□ 1.13
PDAP1-201ENST00000350498 NPM1P06748 294 aaKnown RBP eCLIP22.09■■□□□ 1.13
PDAP1-201ENST00000350498 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
PDAP1-201ENST00000350498 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
PDAP1-201ENST00000350498 MROH2AA6NES4 1674 aa22.06■■□□□ 1.12
PDAP1-201ENST00000350498 PPRC1Q5VV67 1664 aaKnown RBP22.06■■□□□ 1.12
PDAP1-201ENST00000350498 TMEM132EQ6IEE7 984 aa22.05■■□□□ 1.12
PDAP1-201ENST00000350498 CD109Q6YHK3 1445 aa22.04■■□□□ 1.12
PDAP1-201ENST00000350498 BLMP54132 1417 aaPredicted RBP22.04■■□□□ 1.12
PDAP1-201ENST00000350498 ABCA6Q8N139 1617 aa22.04■■□□□ 1.12
PDAP1-201ENST00000350498 SKAP1Q86WV1 359 aa22.04■■□□□ 1.12
PDAP1-201ENST00000350498 CCDC146Q8IYE0 955 aa22.04■■□□□ 1.12
PDAP1-201ENST00000350498 CARD14Q9BXL6 1004 aa22.04■■□□□ 1.12
PDAP1-201ENST00000350498 TRAK1Q9UPV9 953 aa22.03■■□□□ 1.12
PDAP1-201ENST00000350498 MYOM1P52179 1685 aa22.02■■□□□ 1.12
PDAP1-201ENST00000350498 NOS1P29475 1434 aa22.02■■□□□ 1.12
PDAP1-201ENST00000350498 EFCAB6Q5THR3 1501 aa22.02■■□□□ 1.11
PDAP1-201ENST00000350498 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
PDAP1-201ENST00000350498 MAP3K4Q9Y6R4 1608 aa22■■□□□ 1.11
PDAP1-201ENST00000350498 NPM2Q86SE8 214 aaKnown RBP22■■□□□ 1.11
PDAP1-201ENST00000350498 ZNF518AQ6AHZ1 1483 aa22■■□□□ 1.11
PDAP1-201ENST00000350498 DEKP35659 375 aaKnown RBP22■■□□□ 1.11
PDAP1-201ENST00000350498 C20orf194Q5TEA3 1177 aa21.99■■□□□ 1.11
PDAP1-201ENST00000350498 ERVK-7P63135 1459 aa21.99■■□□□ 1.11
PDAP1-201ENST00000350498 KIF1BO60333 1816 aa21.98■■□□□ 1.11
PDAP1-201ENST00000350498 NPATQ14207 1427 aa21.98■■□□□ 1.11
PDAP1-201ENST00000350498 FRMPD1Q5SYB0 1578 aa21.98■■□□□ 1.11
PDAP1-201ENST00000350498 PDE3BQ13370 1112 aa21.98■■□□□ 1.11
PDAP1-201ENST00000350498 WDR43Q15061 677 aaKnown RBP eCLIP21.98■■□□□ 1.11
PDAP1-201ENST00000350498 CDCA8Q53HL2 280 aa21.97■■□□□ 1.11
PDAP1-201ENST00000350498 SYNMO15061 1565 aa21.96■■□□□ 1.11
PDAP1-201ENST00000350498 ANP32AP39687 249 aaKnown RBP21.96■■□□□ 1.11
PDAP1-201ENST00000350498 IPO9Q96P70 1041 aaKnown RBP21.96■■□□□ 1.11
PDAP1-201ENST00000350498 ASXL1Q8IXJ9 1541 aa21.96■■□□□ 1.11
PDAP1-201ENST00000350498 TNNT2P45379 298 aaPredicted RBP21.96■■□□□ 1.11
PDAP1-201ENST00000350498 STAC3Q96MF2 364 aa21.95■■□□□ 1.1
PDAP1-201ENST00000350498 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
PDAP1-201ENST00000350498 EIF3AQ14152 1382 aaKnown RBP21.95■■□□□ 1.1
PDAP1-201ENST00000350498 CRBNQ96SW2 442 aa21.94■■□□□ 1.1
PDAP1-201ENST00000350498 SPINK5Q9NQ38 1064 aaPredicted RBP21.94■■□□□ 1.1
PDAP1-201ENST00000350498 SLC12A5Q9H2X9 1139 aa21.93■■□□□ 1.1
PDAP1-201ENST00000350498 ZMYM4Q5VZL5 1548 aa21.92■■□□□ 1.1
PDAP1-201ENST00000350498 MYOM2P54296 1465 aa21.92■■□□□ 1.1
PDAP1-201ENST00000350498 IFT172Q9UG01 1749 aa21.92■■□□□ 1.1
PDAP1-201ENST00000350498 KDM5AP29375 1690 aaKnown RBP21.91■■□□□ 1.1
PDAP1-201ENST00000350498 APAF1O14727 1248 aa21.9■■□□□ 1.1
PDAP1-201ENST00000350498 KIAA1210Q9ULL0 1709 aa21.9■■□□□ 1.1
PDAP1-201ENST00000350498 SAFB2Q14151 953 aaKnown RBP eCLIP21.89■■□□□ 1.1
PDAP1-201ENST00000350498 DUSP27Q5VZP5 1158 aa21.89■■□□□ 1.1
PDAP1-201ENST00000350498 ZBTB47Q9UFB7 747 aaPredicted RBP21.89■■□□□ 1.1
PDAP1-201ENST00000350498 DMRT2Q9Y5R5 561 aa21.89■■□□□ 1.1
PDAP1-201ENST00000350498 CENPJQ9HC77 1338 aaPredicted RBP21.88■■□□□ 1.09
PDAP1-201ENST00000350498 ADGRB3O60242 1522 aa21.88■■□□□ 1.09
PDAP1-201ENST00000350498 NRXN1Q9ULB1 1477 aa21.87■■□□□ 1.09
PDAP1-201ENST00000350498 C14orf93Q9H972 538 aaKnown RBP21.86■■□□□ 1.09
PDAP1-201ENST00000350498 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
PDAP1-201ENST00000350498 SIGLEC1Q9BZZ2 1709 aa21.86■■□□□ 1.09
PDAP1-201ENST00000350498 MLH3Q9UHC1 1453 aa21.86■■□□□ 1.09
PDAP1-201ENST00000350498 ZNF521Q96K83 1311 aa21.86■■□□□ 1.09
PDAP1-201ENST00000350498 HECW2Q9P2P5 1572 aa21.85■■□□□ 1.09
PDAP1-201ENST00000350498 PDE4AP27815 886 aa21.85■■□□□ 1.09
PDAP1-201ENST00000350498 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
PDAP1-201ENST00000350498 ABCC3O15438 1527 aa21.83■■□□□ 1.09
PDAP1-201ENST00000350498 GOLGA2Q08379 1002 aa21.83■■□□□ 1.09
PDAP1-201ENST00000350498 CYB5RLQ6IPT4 315 aa21.83■■□□□ 1.09
PDAP1-201ENST00000350498 NEURL4Q96JN8 1562 aa21.82■■□□□ 1.08
PDAP1-201ENST00000350498 INSRP06213 1382 aa21.82■■□□□ 1.08
PDAP1-201ENST00000350498 YEATS2Q9ULM3 1422 aa21.82■■□□□ 1.08
PDAP1-201ENST00000350498 IDI1Q13907 227 aa21.81■■□□□ 1.08
PDAP1-201ENST00000350498 PPLO60437 1756 aa21.81■■□□□ 1.08
PDAP1-201ENST00000350498 NSD3Q9BZ95 1437 aa21.8■■□□□ 1.08
PDAP1-201ENST00000350498 STK26Q9P289 416 aa21.8■■□□□ 1.08
PDAP1-201ENST00000350498 ADGRB1O14514 1584 aa21.8■■□□□ 1.08
PDAP1-201ENST00000350498 SLFN5Q08AF3 891 aa21.79■■□□□ 1.08
PDAP1-201ENST00000350498 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
PDAP1-201ENST00000350498 LAS1LQ9Y4W2 734 aaKnown RBP21.79■■□□□ 1.08
PDAP1-201ENST00000350498 RRP7AQ9Y3A4 280 aaKnown RBP21.79■■□□□ 1.08
PDAP1-201ENST00000350498 NPC1L1Q9UHC9 1359 aa21.79■■□□□ 1.08
PDAP1-201ENST00000350498 TCERG1O14776 1098 aaKnown RBP21.78■■□□□ 1.08
PDAP1-201ENST00000350498 BACH2Q9BYV9 841 aa21.78■■□□□ 1.08
PDAP1-201ENST00000350498 CABP2Q9NPB3 220 aa21.78■■□□□ 1.08
PDAP1-201ENST00000350498 BCAR3O75815 825 aa21.77■■□□□ 1.08
PDAP1-201ENST00000350498 FBXO31Q5XUX0 539 aaPredicted RBP21.76■■□□□ 1.07
PDAP1-201ENST00000350498 MORC1Q86VD1 984 aa21.76■■□□□ 1.07
PDAP1-201ENST00000350498 QRICH2Q9H0J4 1663 aa21.76■■□□□ 1.07
PDAP1-201ENST00000350498 CAMSAP1Q5T5Y3 1602 aa21.75■■□□□ 1.07
PDAP1-201ENST00000350498 MYO3AQ8NEV4 1616 aa21.75■■□□□ 1.07
PDAP1-201ENST00000350498 DIP2CQ9Y2E4 1556 aa21.75■■□□□ 1.07
PDAP1-201ENST00000350498 CFAP74Q9C0B2 1584 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms