RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 RRP1P56182 461 aaKnown RBP20.61■□□□□ 0.89
TNFSF13-202ENST00000349228 NPC1L1Q9UHC9 1359 aa20.6■□□□□ 0.89
TNFSF13-202ENST00000349228 EIF5BO60841 1220 aaKnown RBP20.6■□□□□ 0.89
TNFSF13-202ENST00000349228 SYNMO15061 1565 aa20.6■□□□□ 0.89
TNFSF13-202ENST00000349228 MYOM2P54296 1465 aa20.59■□□□□ 0.89
TNFSF13-202ENST00000349228 ASXL2Q76L83 1435 aa20.58■□□□□ 0.89
TNFSF13-202ENST00000349228 LMTK2Q8IWU2 1503 aa20.57■□□□□ 0.88
TNFSF13-202ENST00000349228 MYT1LQ9UL68 1186 aa20.56■□□□□ 0.88
TNFSF13-202ENST00000349228 MROH1Q8NDA8 1641 aa20.55■□□□□ 0.88
TNFSF13-202ENST00000349228 ZNF518AQ6AHZ1 1483 aa20.55■□□□□ 0.88
TNFSF13-202ENST00000349228 MSH5O43196 834 aa20.54■□□□□ 0.88
TNFSF13-202ENST00000349228 AMER1Q5JTC6 1135 aaPredicted RBP20.54■□□□□ 0.88
TNFSF13-202ENST00000349228 EFCAB6Q5THR3 1501 aa20.53■□□□□ 0.88
TNFSF13-202ENST00000349228 NPM1P06748 294 aaKnown RBP eCLIP20.53■□□□□ 0.88
TNFSF13-202ENST00000349228 ASXL1Q8IXJ9 1541 aa20.52■□□□□ 0.88
TNFSF13-202ENST00000349228 PPP2R1AP30153 589 aa20.52■□□□□ 0.88
TNFSF13-202ENST00000349228 PIK3C2GO75747 1445 aa20.52■□□□□ 0.88
TNFSF13-202ENST00000349228 MAP3K4Q9Y6R4 1608 aa20.52■□□□□ 0.87
TNFSF13-202ENST00000349228 CFAP74Q9C0B2 1584 aa20.5■□□□□ 0.87
TNFSF13-202ENST00000349228 WDR43Q15061 677 aaKnown RBP eCLIP20.49■□□□□ 0.87
TNFSF13-202ENST00000349228 NRXN1Q9ULB1 1477 aa20.49■□□□□ 0.87
TNFSF13-202ENST00000349228 KIDINS220Q9ULH0 1771 aa20.48■□□□□ 0.87
TNFSF13-202ENST00000349228 SENP3-EIF4A1A0A087X0R7 540 aa20.48■□□□□ 0.87
TNFSF13-202ENST00000349228 SBNO2Q9Y2G9 1366 aa20.48■□□□□ 0.87
TNFSF13-202ENST00000349228 KIF1BO60333 1816 aa20.47■□□□□ 0.87
TNFSF13-202ENST00000349228 SALL2Q9Y467 1007 aaPredicted RBP20.47■□□□□ 0.87
TNFSF13-202ENST00000349228 ADAMTS8Q9UP79 889 aa20.46■□□□□ 0.87
TNFSF13-202ENST00000349228 KDM5AP29375 1690 aaKnown RBP20.46■□□□□ 0.87
TNFSF13-202ENST00000349228 MLH3Q9UHC1 1453 aa20.46■□□□□ 0.87
TNFSF13-202ENST00000349228 EXOC6Q8TAG9 804 aa20.44■□□□□ 0.86
TNFSF13-202ENST00000349228 CDCA7LQ96GN5 454 aa20.44■□□□□ 0.86
TNFSF13-202ENST00000349228 CFAP70Q5T0N1 1121 aa20.44■□□□□ 0.86
TNFSF13-202ENST00000349228 ABCA6Q8N139 1617 aa20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 NGEFQ8N5V2 710 aa20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 IFT172Q9UG01 1749 aa20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 ADGRF5Q8IZF2 1346 aa20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 SETBP1Q9Y6X0 1596 aa20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 POGZQ7Z3K3 1410 aa20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 MYOM1P52179 1685 aa20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 PPRC1Q5VV67 1664 aaKnown RBP20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
TNFSF13-202ENST00000349228 RPGRIP1LQ68CZ1 1315 aa20.42■□□□□ 0.86
TNFSF13-202ENST00000349228 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
TNFSF13-202ENST00000349228 ADGRB3O60242 1522 aa20.41■□□□□ 0.86
TNFSF13-202ENST00000349228 MYO3AQ8NEV4 1616 aa20.41■□□□□ 0.86
TNFSF13-202ENST00000349228 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
TNFSF13-202ENST00000349228 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
TNFSF13-202ENST00000349228 UGGT1Q9NYU2 1555 aa20.39■□□□□ 0.85
TNFSF13-202ENST00000349228 ZNF521Q96K83 1311 aa20.39■□□□□ 0.85
TNFSF13-202ENST00000349228 MS4A1P11836 297 aa20.38■□□□□ 0.85
TNFSF13-202ENST00000349228 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
TNFSF13-202ENST00000349228 ANP32AP39687 249 aaKnown RBP20.36■□□□□ 0.85
TNFSF13-202ENST00000349228 HECW2Q9P2P5 1572 aa20.36■□□□□ 0.85
TNFSF13-202ENST00000349228 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
TNFSF13-202ENST00000349228 CENPJQ9HC77 1338 aaPredicted RBP20.35■□□□□ 0.85
TNFSF13-202ENST00000349228 NOS1P29475 1434 aa20.35■□□□□ 0.85
TNFSF13-202ENST00000349228 NEO1Q92859 1461 aa20.34■□□□□ 0.85
TNFSF13-202ENST00000349228 DUSP27Q5VZP5 1158 aa20.34■□□□□ 0.85
TNFSF13-202ENST00000349228 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.34■□□□□ 0.85
TNFSF13-202ENST00000349228 NPATQ14207 1427 aa20.34■□□□□ 0.85
TNFSF13-202ENST00000349228 PUS7Q96PZ0 661 aaKnown RBP20.34■□□□□ 0.85
TNFSF13-202ENST00000349228 MROH2AA6NES4 1674 aa20.34■□□□□ 0.85
TNFSF13-202ENST00000349228 PLEKHH1Q9ULM0 1364 aa20.33■□□□□ 0.84
TNFSF13-202ENST00000349228 FRMPD1Q5SYB0 1578 aa20.33■□□□□ 0.84
TNFSF13-202ENST00000349228 NOP58Q9Y2X3 529 aaKnown RBP20.31■□□□□ 0.84
TNFSF13-202ENST00000349228 SLFN5Q08AF3 891 aa20.31■□□□□ 0.84
TNFSF13-202ENST00000349228 TRMT2AQ8IZ69 625 aaKnown RBP20.31■□□□□ 0.84
TNFSF13-202ENST00000349228 IPO9Q96P70 1041 aaKnown RBP20.3■□□□□ 0.84
TNFSF13-202ENST00000349228 CARD14Q9BXL6 1004 aa20.3■□□□□ 0.84
TNFSF13-202ENST00000349228 POLR3AO14802 1390 aaPredicted RBP20.29■□□□□ 0.84
TNFSF13-202ENST00000349228 ABCC3O15438 1527 aa20.29■□□□□ 0.84
TNFSF13-202ENST00000349228 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
TNFSF13-202ENST00000349228 GGT6Q6P531 493 aa20.29■□□□□ 0.84
TNFSF13-202ENST00000349228 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
TNFSF13-202ENST00000349228 PPLO60437 1756 aa20.28■□□□□ 0.84
TNFSF13-202ENST00000349228 PLIN1O60240 522 aa20.27■□□□□ 0.84
TNFSF13-202ENST00000349228 ARHGAP31Q2M1Z3 1444 aa20.26■□□□□ 0.83
TNFSF13-202ENST00000349228 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
TNFSF13-202ENST00000349228 E9PSI1 815 aa20.26■□□□□ 0.83
TNFSF13-202ENST00000349228 VGFO15240 615 aaPredicted RBP20.26■□□□□ 0.83
TNFSF13-202ENST00000349228 ARXQ96QS3 562 aa20.23■□□□□ 0.83
TNFSF13-202ENST00000349228 PDE4AP27815 886 aa20.22■□□□□ 0.83
TNFSF13-202ENST00000349228 TRAK1Q9UPV9 953 aa20.22■□□□□ 0.83
TNFSF13-202ENST00000349228 CAMSAP1Q5T5Y3 1602 aa20.22■□□□□ 0.83
TNFSF13-202ENST00000349228 NKTRP30414 1462 aaKnown RBP20.22■□□□□ 0.83
TNFSF13-202ENST00000349228 APAF1O14727 1248 aa20.22■□□□□ 0.83
TNFSF13-202ENST00000349228 BACH2Q9BYV9 841 aa20.22■□□□□ 0.83
TNFSF13-202ENST00000349228 CENPQQ7L2Z9 268 aaPredicted RBP20.21■□□□□ 0.83
TNFSF13-202ENST00000349228 ZBTB47Q9UFB7 747 aaPredicted RBP20.21■□□□□ 0.83
TNFSF13-202ENST00000349228 ZC3H13Q5T200 1668 aaKnown RBP20.21■□□□□ 0.83
TNFSF13-202ENST00000349228 ZFYVE9O95405 1425 aa20.21■□□□□ 0.83
TNFSF13-202ENST00000349228 PIK3C2BO00750 1634 aa20.21■□□□□ 0.83
TNFSF13-202ENST00000349228 USP32Q8NFA0 1604 aa20.21■□□□□ 0.83
TNFSF13-202ENST00000349228 MORC1Q86VD1 984 aa20.2■□□□□ 0.83
TNFSF13-202ENST00000349228 QRICH2Q9H0J4 1663 aa20.2■□□□□ 0.82
TNFSF13-202ENST00000349228 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
TNFSF13-202ENST00000349228 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
TNFSF13-202ENST00000349228 EVC2Q86UK5 1308 aa20.19■□□□□ 0.82
TNFSF13-202ENST00000349228 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
TNFSF13-202ENST00000349228 NSD2O96028 1365 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms