RNA–Protein interactions for RNA: ENST00000348161.8

TOM1L1-201, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-201ENST00000348161 RIMS2Q9UQ26 1411 aa22.32■■□□□ 1.16
TOM1L1-201ENST00000348161 NUTM2DQ5VT03 806 aaPredicted RBP22.31■■□□□ 1.16
TOM1L1-201ENST00000348161 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
TOM1L1-201ENST00000348161 VGFO15240 615 aaPredicted RBP22.29■■□□□ 1.16
TOM1L1-201ENST00000348161 KIF1BO60333 1816 aa22.28■■□□□ 1.16
TOM1L1-201ENST00000348161 ZFYVE9O95405 1425 aa22.27■■□□□ 1.16
TOM1L1-201ENST00000348161 NEUROD1Q13562 356 aa22.26■■□□□ 1.15
TOM1L1-201ENST00000348161 NPHP4O75161 1426 aaPredicted RBP22.26■■□□□ 1.15
TOM1L1-201ENST00000348161 SPATA31E1Q6ZUB1 1445 aa22.26■■□□□ 1.15
TOM1L1-201ENST00000348161 SIN3AQ96ST3 1273 aa22.25■■□□□ 1.15
TOM1L1-201ENST00000348161 MED14O60244 1454 aa22.25■■□□□ 1.15
TOM1L1-201ENST00000348161 STRCQ7RTU9 1775 aa22.24■■□□□ 1.15
TOM1L1-201ENST00000348161 CCER1Q8TC90 406 aaPredicted RBP22.24■■□□□ 1.15
TOM1L1-201ENST00000348161 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
TOM1L1-201ENST00000348161 PLEKHG1Q9ULL1 1385 aa22.22■■□□□ 1.15
TOM1L1-201ENST00000348161 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
TOM1L1-201ENST00000348161 MYO5BQ9ULV0 1848 aa22.21■■□□□ 1.15
TOM1L1-201ENST00000348161 DCAF11Q8TEB1 546 aa22.2■■□□□ 1.14
TOM1L1-201ENST00000348161 SLC26A8Q96RN1 970 aa22.2■■□□□ 1.14
TOM1L1-201ENST00000348161 POLR1AO95602 1720 aaPredicted RBP22.2■■□□□ 1.14
TOM1L1-201ENST00000348161 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
TOM1L1-201ENST00000348161 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
TOM1L1-201ENST00000348161 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
TOM1L1-201ENST00000348161 NEXMIFQ5QGS0 1516 aa22.18■■□□□ 1.14
TOM1L1-201ENST00000348161 TBX22Q9Y458 520 aa22.15■■□□□ 1.14
TOM1L1-201ENST00000348161 IQGAP1P46940 1657 aa22.14■■□□□ 1.14
TOM1L1-201ENST00000348161 ADGRF5Q8IZF2 1346 aa22.14■■□□□ 1.13
TOM1L1-201ENST00000348161 L3MBTL2Q969R5 705 aa22.11■■□□□ 1.13
TOM1L1-201ENST00000348161 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
TOM1L1-201ENST00000348161 ZNF335Q9H4Z2 1342 aaPredicted RBP22.1■■□□□ 1.13
TOM1L1-201ENST00000348161 ADAMTS13Q76LX8 1427 aa22.08■■□□□ 1.13
TOM1L1-201ENST00000348161 PPLO60437 1756 aa22.07■■□□□ 1.12
TOM1L1-201ENST00000348161 MYOM2P54296 1465 aa22.07■■□□□ 1.12
TOM1L1-201ENST00000348161 KCNA6P17658 529 aa22.06■■□□□ 1.12
TOM1L1-201ENST00000348161 SETBP1Q9Y6X0 1596 aa22.06■■□□□ 1.12
TOM1L1-201ENST00000348161 PIK3R4Q99570 1358 aa22.04■■□□□ 1.12
TOM1L1-201ENST00000348161 PIK3C2GO75747 1445 aa22.04■■□□□ 1.12
TOM1L1-201ENST00000348161 DIP2AQ14689 1571 aa22.04■■□□□ 1.12
TOM1L1-201ENST00000348161 C14orf93Q9H972 538 aaKnown RBP22.03■■□□□ 1.12
TOM1L1-201ENST00000348161 CFAP70Q5T0N1 1121 aa22.03■■□□□ 1.12
TOM1L1-201ENST00000348161 TIMELESSQ9UNS1 1208 aa22.03■■□□□ 1.12
TOM1L1-201ENST00000348161 NRXN1Q9ULB1 1477 aa22.01■■□□□ 1.11
TOM1L1-201ENST00000348161 AMOTL2Q9Y2J4 779 aa22.01■■□□□ 1.11
TOM1L1-201ENST00000348161 IFT172Q9UG01 1749 aa22.01■■□□□ 1.11
TOM1L1-201ENST00000348161 METP08581 1390 aa22.01■■□□□ 1.11
TOM1L1-201ENST00000348161 ALKQ9UM73 1620 aa21.99■■□□□ 1.11
TOM1L1-201ENST00000348161 TMEM132EQ6IEE7 984 aa21.98■■□□□ 1.11
TOM1L1-201ENST00000348161 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
TOM1L1-201ENST00000348161 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
TOM1L1-201ENST00000348161 CPS1P31327 1500 aa21.96■■□□□ 1.11
TOM1L1-201ENST00000348161 PRAG1Q86YV5 1406 aa21.95■■□□□ 1.1
TOM1L1-201ENST00000348161 CERKQ8TCT0 537 aa21.95■■□□□ 1.1
TOM1L1-201ENST00000348161 STK26Q9P289 416 aa21.94■■□□□ 1.1
TOM1L1-201ENST00000348161 LTBP4Q8N2S1 1624 aa21.93■■□□□ 1.1
TOM1L1-201ENST00000348161 PTPRUQ92729 1446 aa21.92■■□□□ 1.1
TOM1L1-201ENST00000348161 NKTRP30414 1462 aaKnown RBP21.91■■□□□ 1.1
TOM1L1-201ENST00000348161 C14orf37Q86TY3 774 aa21.9■■□□□ 1.1
TOM1L1-201ENST00000348161 LRPPRCP42704 1394 aaKnown RBP21.89■■□□□ 1.1
TOM1L1-201ENST00000348161 LAMC1P11047 1609 aa21.89■■□□□ 1.09
TOM1L1-201ENST00000348161 RBM33Q96EV2 1170 aaKnown RBP21.89■■□□□ 1.09
TOM1L1-201ENST00000348161 YTHDC2Q9H6S0 1430 aaKnown RBP21.88■■□□□ 1.09
TOM1L1-201ENST00000348161 TMEM94Q12767 1356 aa21.88■■□□□ 1.09
TOM1L1-201ENST00000348161 ABCC11Q96J66 1382 aa21.88■■□□□ 1.09
TOM1L1-201ENST00000348161 CHD2O14647 1828 aaKnown RBP21.88■■□□□ 1.09
TOM1L1-201ENST00000348161 NWD1Q149M9 1564 aa21.88■■□□□ 1.09
TOM1L1-201ENST00000348161 NBPF1Q3BBV0 1214 aa21.88■■□□□ 1.09
TOM1L1-201ENST00000348161 NBPF8Q3BBV2 869 aa21.88■■□□□ 1.09
TOM1L1-201ENST00000348161 LRRC7Q96NW7 1537 aa21.87■■□□□ 1.09
TOM1L1-201ENST00000348161 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
TOM1L1-201ENST00000348161 ROCK2O75116 1388 aaKnown RBP21.85■■□□□ 1.09
TOM1L1-201ENST00000348161 SETD1AO15047 1707 aaKnown RBP21.84■■□□□ 1.09
TOM1L1-201ENST00000348161 STRCP1A6NGW2 1772 aa21.84■■□□□ 1.09
TOM1L1-201ENST00000348161 SIRT1Q96EB6 747 aa21.83■■□□□ 1.09
TOM1L1-201ENST00000348161 POGKQ9P215 609 aa21.83■■□□□ 1.09
TOM1L1-201ENST00000348161 PTCH1Q13635 1447 aa21.83■■□□□ 1.09
TOM1L1-201ENST00000348161 NCOA3Q9Y6Q9 1424 aa21.83■■□□□ 1.09
TOM1L1-201ENST00000348161 ROBO2Q9HCK4 1378 aa21.83■■□□□ 1.09
TOM1L1-201ENST00000348161 C19orf44Q9H6X5 657 aa21.82■■□□□ 1.08
TOM1L1-201ENST00000348161 ASXL1Q8IXJ9 1541 aa21.82■■□□□ 1.08
TOM1L1-201ENST00000348161 WAPLQ7Z5K2 1190 aa21.81■■□□□ 1.08
TOM1L1-201ENST00000348161 IQSEC2Q5JU85 1478 aa21.81■■□□□ 1.08
TOM1L1-201ENST00000348161 TECPR2O15040 1411 aa21.81■■□□□ 1.08
TOM1L1-201ENST00000348161 MSH6P52701 1360 aa21.81■■□□□ 1.08
TOM1L1-201ENST00000348161 ADGRB1O14514 1584 aa21.81■■□□□ 1.08
TOM1L1-201ENST00000348161 XRN1Q8IZH2 1706 aaKnown RBP21.8■■□□□ 1.08
TOM1L1-201ENST00000348161 PRAM1Q96QH2 718 aa21.8■■□□□ 1.08
TOM1L1-201ENST00000348161 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
TOM1L1-201ENST00000348161 TOM1O60784 492 aa21.79■■□□□ 1.08
TOM1L1-201ENST00000348161 KIAA1210Q9ULL0 1709 aa21.79■■□□□ 1.08
TOM1L1-201ENST00000348161 FAM135BQ49AJ0 1406 aa21.78■■□□□ 1.08
TOM1L1-201ENST00000348161 ATF3P18847 181 aa21.78■■□□□ 1.08
TOM1L1-201ENST00000348161 UBAP1LF5GYI3 381 aa21.77■■□□□ 1.08
TOM1L1-201ENST00000348161 SAFB2Q14151 953 aaKnown RBP eCLIP21.77■■□□□ 1.08
TOM1L1-201ENST00000348161 CADPS2Q86UW7 1296 aa21.76■■□□□ 1.07
TOM1L1-201ENST00000348161 TRPM1Q7Z4N2 1603 aa21.74■■□□□ 1.07
TOM1L1-201ENST00000348161 RALGAPBQ86X10 1494 aa21.74■■□□□ 1.07
TOM1L1-201ENST00000348161 GPRASP1Q5JY77 1395 aa21.73■■□□□ 1.07
TOM1L1-201ENST00000348161 DLC1Q96QB1 1528 aa21.73■■□□□ 1.07
TOM1L1-201ENST00000348161 PLEKHH1Q9ULM0 1364 aa21.73■■□□□ 1.07
TOM1L1-201ENST00000348161 EIF3AQ14152 1382 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms