RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 SLC52A1Q9NWF4 448 aa30.28■■■□□ 2.44
DUSP28-201ENST00000343217 EID1Q9Y6B2 187 aa30.28■■■□□ 2.44
DUSP28-201ENST00000343217 IQGAP3Q86VI3 1631 aa30.26■■■□□ 2.43
DUSP28-201ENST00000343217 E9PCH4 1651 aa30.23■■■□□ 2.43
DUSP28-201ENST00000343217 LRRC7Q96NW7 1537 aa30.23■■■□□ 2.43
DUSP28-201ENST00000343217 TIMELESSQ9UNS1 1208 aa30.21■■■□□ 2.43
DUSP28-201ENST00000343217 MYO5BQ9ULV0 1848 aa30.2■■■□□ 2.42
DUSP28-201ENST00000343217 TOM1O60784 492 aa30.19■■■□□ 2.42
DUSP28-201ENST00000343217 ALKQ9UM73 1620 aa30.18■■■□□ 2.42
DUSP28-201ENST00000343217 SIN3AQ96ST3 1273 aa30.15■■■□□ 2.42
DUSP28-201ENST00000343217 TMEM131LA2VDJ0 1609 aa30.15■■■□□ 2.42
DUSP28-201ENST00000343217 ANKRD30BQ9BXX2 1392 aa30.14■■■□□ 2.42
DUSP28-201ENST00000343217 ZFYVE9O95405 1425 aa30.12■■■□□ 2.41
DUSP28-201ENST00000343217 NEUROD1Q13562 356 aa30.12■■■□□ 2.41
DUSP28-201ENST00000343217 XIRP1Q702N8 1843 aaKnown RBP30.12■■■□□ 2.41
DUSP28-201ENST00000343217 PIP4K2BP78356 416 aa30.11■■■□□ 2.41
DUSP28-201ENST00000343217 DISP3Q9P2K9 1392 aa30.09■■■□□ 2.41
DUSP28-201ENST00000343217 SCAF1Q9H7N4 1312 aaKnown RBP30.08■■■□□ 2.41
DUSP28-201ENST00000343217 FOXD1Q16676 465 aa30.07■■■□□ 2.4
DUSP28-201ENST00000343217 RIMS2Q9UQ26 1411 aa30.06■■■□□ 2.4
DUSP28-201ENST00000343217 SLC26A8Q96RN1 970 aa30.05■■■□□ 2.4
DUSP28-201ENST00000343217 TONSLQ96HA7 1378 aa30.04■■■□□ 2.4
DUSP28-201ENST00000343217 HSPA1LP34931 641 aa30.03■■■□□ 2.4
DUSP28-201ENST00000343217 PLEKHG1Q9ULL1 1385 aa30.03■■■□□ 2.4
DUSP28-201ENST00000343217 KCNA6P17658 529 aa30.03■■■□□ 2.4
DUSP28-201ENST00000343217 NWD1Q149M9 1564 aa30.01■■■□□ 2.4
DUSP28-201ENST00000343217 HDGFP51858 240 aaKnown RBP30■■■□□ 2.39
DUSP28-201ENST00000343217 SPHKAPQ2M3C7 1700 aa30■■■□□ 2.39
DUSP28-201ENST00000343217 CHGAP10645 457 aaKnown RBP29.97■■■□□ 2.39
DUSP28-201ENST00000343217 CHD2O14647 1828 aaKnown RBP29.96■■■□□ 2.39
DUSP28-201ENST00000343217 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.96■■■□□ 2.39
DUSP28-201ENST00000343217 NKTRP30414 1462 aaKnown RBP29.96■■■□□ 2.39
DUSP28-201ENST00000343217 PPP1R15AO75807 674 aaPredicted RBP29.95■■■□□ 2.39
DUSP28-201ENST00000343217 TMEM94Q12767 1356 aa29.95■■■□□ 2.39
DUSP28-201ENST00000343217 BCANQ96GW7 911 aa29.94■■■□□ 2.38
DUSP28-201ENST00000343217 ILDR2Q71H61 639 aa29.91■■■□□ 2.38
DUSP28-201ENST00000343217 PROSER2Q86WR7 435 aaPredicted RBP29.9■■■□□ 2.38
DUSP28-201ENST00000343217 TBX22Q9Y458 520 aa29.9■■■□□ 2.38
DUSP28-201ENST00000343217 ADAMTS13Q76LX8 1427 aa29.89■■■□□ 2.38
DUSP28-201ENST00000343217 SENP3Q9H4L4 574 aaPredicted RBP29.89■■■□□ 2.38
DUSP28-201ENST00000343217 DIP2AQ14689 1571 aa29.88■■■□□ 2.37
DUSP28-201ENST00000343217 NUTM2DQ5VT03 806 aaPredicted RBP29.86■■■□□ 2.37
DUSP28-201ENST00000343217 TRPM2O94759 1503 aa29.85■■■□□ 2.37
DUSP28-201ENST00000343217 CCDC144AA2RUR9 1427 aa29.85■■■□□ 2.37
DUSP28-201ENST00000343217 CLTCL1P53675 1640 aa29.84■■■□□ 2.37
DUSP28-201ENST00000343217 RBM33Q96EV2 1170 aaKnown RBP29.83■■■□□ 2.37
DUSP28-201ENST00000343217 MED1Q15648 1581 aaPredicted RBP29.83■■■□□ 2.37
DUSP28-201ENST00000343217 PIK3R4Q99570 1358 aa29.82■■■□□ 2.36
DUSP28-201ENST00000343217 FAM135BQ49AJ0 1406 aa29.81■■■□□ 2.36
DUSP28-201ENST00000343217 NRXN3Q9Y4C0 1643 aa29.78■■■□□ 2.36
DUSP28-201ENST00000343217 L3MBTL2Q969R5 705 aa29.78■■■□□ 2.36
DUSP28-201ENST00000343217 KIF1BO60333 1816 aa29.78■■■□□ 2.36
DUSP28-201ENST00000343217 SETBP1Q9Y6X0 1596 aa29.77■■■□□ 2.36
DUSP28-201ENST00000343217 MSH6P52701 1360 aa29.76■■■□□ 2.36
DUSP28-201ENST00000343217 NCOA3Q9Y6Q9 1424 aa29.75■■■□□ 2.35
DUSP28-201ENST00000343217 ROBO1Q9Y6N7 1651 aa29.75■■■□□ 2.35
DUSP28-201ENST00000343217 NEXMIFQ5QGS0 1516 aa29.74■■■□□ 2.35
DUSP28-201ENST00000343217 ZNF326Q5BKZ1 582 aaKnown RBP29.73■■■□□ 2.35
DUSP28-201ENST00000343217 PTPRUQ92729 1446 aa29.72■■■□□ 2.35
DUSP28-201ENST00000343217 XRN1Q8IZH2 1706 aaKnown RBP29.68■■■□□ 2.34
DUSP28-201ENST00000343217 ZNF316A6NFI3 1004 aaPredicted RBP29.68■■■□□ 2.34
DUSP28-201ENST00000343217 SOCS7O14512 581 aa29.68■■■□□ 2.34
DUSP28-201ENST00000343217 AMOTL2Q9Y2J4 779 aa29.67■■■□□ 2.34
DUSP28-201ENST00000343217 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.65■■■□□ 2.34
DUSP28-201ENST00000343217 SLAIN2Q9P270 581 aa29.65■■■□□ 2.34
DUSP28-201ENST00000343217 METP08581 1390 aa29.61■■■□□ 2.33
DUSP28-201ENST00000343217 C19orf44Q9H6X5 657 aa29.61■■■□□ 2.33
DUSP28-201ENST00000343217 SPATA31E1Q6ZUB1 1445 aa29.59■■■□□ 2.33
DUSP28-201ENST00000343217 C14orf37Q86TY3 774 aa29.59■■■□□ 2.33
DUSP28-201ENST00000343217 PPLO60437 1756 aa29.57■■■□□ 2.32
DUSP28-201ENST00000343217 SETD1AO15047 1707 aaKnown RBP29.56■■■□□ 2.32
DUSP28-201ENST00000343217 PHLPP1O60346 1717 aa29.56■■■□□ 2.32
DUSP28-201ENST00000343217 CADPS2Q86UW7 1296 aa29.56■■■□□ 2.32
DUSP28-201ENST00000343217 RPGRIP1LQ68CZ1 1315 aa29.55■■■□□ 2.32
DUSP28-201ENST00000343217 VGFO15240 615 aaPredicted RBP29.54■■■□□ 2.32
DUSP28-201ENST00000343217 PHF23Q9BUL5 403 aaPredicted RBP29.54■■■□□ 2.32
DUSP28-201ENST00000343217 DCAF11Q8TEB1 546 aa29.53■■■□□ 2.32
DUSP28-201ENST00000343217 DCCP43146 1447 aa29.53■■■□□ 2.32
DUSP28-201ENST00000343217 ATF3P18847 181 aa29.52■■■□□ 2.32
DUSP28-201ENST00000343217 RGL3Q3MIN7 710 aa29.52■■■□□ 2.32
DUSP28-201ENST00000343217 STAC3Q96MF2 364 aa29.52■■■□□ 2.32
DUSP28-201ENST00000343217 NBPF8Q3BBV2 869 aa29.52■■■□□ 2.32
DUSP28-201ENST00000343217 COL16A1Q07092 1604 aaPredicted RBP29.5■■■□□ 2.31
DUSP28-201ENST00000343217 AHDC1Q5TGY3 1603 aaPredicted RBP29.47■■■□□ 2.31
DUSP28-201ENST00000343217 NALCNQ8IZF0 1738 aa29.45■■■□□ 2.31
DUSP28-201ENST00000343217 KDM2AQ9Y2K7 1162 aa29.45■■■□□ 2.31
DUSP28-201ENST00000343217 PRAG1Q86YV5 1406 aa29.44■■■□□ 2.3
DUSP28-201ENST00000343217 ADGRL3Q9HAR2 1447 aa29.44■■■□□ 2.3
DUSP28-201ENST00000343217 IFT172Q9UG01 1749 aa29.44■■■□□ 2.3
DUSP28-201ENST00000343217 PTCH1Q13635 1447 aa29.44■■■□□ 2.3
DUSP28-201ENST00000343217 JCADQ9P266 1359 aa29.43■■■□□ 2.3
DUSP28-201ENST00000343217 RALGAPBQ86X10 1494 aa29.43■■■□□ 2.3
DUSP28-201ENST00000343217 RGS17Q9UGC6 210 aaPredicted RBP29.43■■■□□ 2.3
DUSP28-201ENST00000343217 MST1RQ04912 1400 aa29.42■■■□□ 2.3
DUSP28-201ENST00000343217 BRINP3Q76B58 766 aa29.41■■■□□ 2.3
DUSP28-201ENST00000343217 ROBO2Q9HCK4 1378 aa29.38■■■□□ 2.29
DUSP28-201ENST00000343217 EIF4G2P78344 907 aaKnown RBP eCLIP29.37■■■□□ 2.29
DUSP28-201ENST00000343217 ASXL1Q8IXJ9 1541 aa29.37■■■□□ 2.29
DUSP28-201ENST00000343217 TRPM1Q7Z4N2 1603 aa29.36■■■□□ 2.29
DUSP28-201ENST00000343217 ADGRF5Q8IZF2 1346 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms