RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-203ENST00000343106 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-203ENST00000343106 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-203ENST00000343106 EIF2AK4Q9P2K8 1649 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-203ENST00000343106 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
UBE2D3-203ENST00000343106 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
UBE2D3-203ENST00000343106 MS4A1P11836 297 aa12.96□□□□□ -0.33
UBE2D3-203ENST00000343106 ABCC1P33527 1531 aa12.96□□□□□ -0.34
UBE2D3-203ENST00000343106 BCAR3O75815 825 aa12.95□□□□□ -0.34
UBE2D3-203ENST00000343106 NEUROD2Q15784 382 aa12.95□□□□□ -0.34
UBE2D3-203ENST00000343106 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
UBE2D3-203ENST00000343106 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
UBE2D3-203ENST00000343106 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-203ENST00000343106 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
UBE2D3-203ENST00000343106 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-203ENST00000343106 ZMYM4Q5VZL5 1548 aa12.94□□□□□ -0.34
UBE2D3-203ENST00000343106 PTPRTO14522 1441 aa12.94□□□□□ -0.34
UBE2D3-203ENST00000343106 INSRP06213 1382 aa12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 GGT6Q6P531 493 aa12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 ZNF521Q96K83 1311 aa12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 RGS3P49796 1198 aa12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 LAMC1P11047 1609 aa12.93□□□□□ -0.34
UBE2D3-203ENST00000343106 FANCAO15360 1455 aa12.92□□□□□ -0.34
UBE2D3-203ENST00000343106 SLC4A3P48751 1232 aa12.92□□□□□ -0.34
UBE2D3-203ENST00000343106 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-203ENST00000343106 UGGT1Q9NYU2 1555 aa12.92□□□□□ -0.34
UBE2D3-203ENST00000343106 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-203ENST00000343106 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
UBE2D3-203ENST00000343106 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
UBE2D3-203ENST00000343106 TRPM2O94759 1503 aa12.9□□□□□ -0.34
UBE2D3-203ENST00000343106 ASXL1Q8IXJ9 1541 aa12.9□□□□□ -0.34
UBE2D3-203ENST00000343106 UHRF1BP1LA0JNW5 1464 aa12.9□□□□□ -0.34
UBE2D3-203ENST00000343106 CENPQQ7L2Z9 268 aaPredicted RBP12.9□□□□□ -0.34
UBE2D3-203ENST00000343106 ZFYVE16Q7Z3T8 1539 aa12.9□□□□□ -0.34
UBE2D3-203ENST00000343106 CLTCL1P53675 1640 aa12.9□□□□□ -0.34
UBE2D3-203ENST00000343106 NEFMP07197 916 aa12.89□□□□□ -0.35
UBE2D3-203ENST00000343106 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
UBE2D3-203ENST00000343106 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
UBE2D3-203ENST00000343106 ADGRL1O94910 1474 aa12.89□□□□□ -0.35
UBE2D3-203ENST00000343106 RNF17Q9BXT8 1623 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-203ENST00000343106 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-203ENST00000343106 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
UBE2D3-203ENST00000343106 E9PSI1 815 aa12.87□□□□□ -0.35
UBE2D3-203ENST00000343106 TRMT2AQ8IZ69 625 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-203ENST00000343106 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-203ENST00000343106 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-203ENST00000343106 SAFB2Q14151 953 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBE2D3-203ENST00000343106 ATP7AQ04656 1500 aa12.86□□□□□ -0.35
UBE2D3-203ENST00000343106 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
UBE2D3-203ENST00000343106 WWC1Q8IX03 1113 aa12.85□□□□□ -0.35
UBE2D3-203ENST00000343106 PANK1Q8TE04 598 aa12.85□□□□□ -0.35
UBE2D3-203ENST00000343106 NOS1P29475 1434 aa12.85□□□□□ -0.35
UBE2D3-203ENST00000343106 COG6Q9Y2V7 657 aa12.85□□□□□ -0.35
UBE2D3-203ENST00000343106 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
UBE2D3-203ENST00000343106 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
UBE2D3-203ENST00000343106 IGHDP01880 384 aa12.84□□□□□ -0.35
UBE2D3-203ENST00000343106 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBE2D3-203ENST00000343106 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-203ENST00000343106 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
UBE2D3-203ENST00000343106 SYNMO15061 1565 aa12.84□□□□□ -0.35
UBE2D3-203ENST00000343106 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
UBE2D3-203ENST00000343106 IQGAP1P46940 1657 aa12.83□□□□□ -0.36
UBE2D3-203ENST00000343106 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
UBE2D3-203ENST00000343106 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
UBE2D3-203ENST00000343106 DDRGK1Q96HY6 314 aa12.83□□□□□ -0.36
UBE2D3-203ENST00000343106 ASXL2Q76L83 1435 aa12.82□□□□□ -0.36
UBE2D3-203ENST00000343106 NKTRP30414 1462 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-203ENST00000343106 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
UBE2D3-203ENST00000343106 MTHFSP49914 203 aa12.82□□□□□ -0.36
UBE2D3-203ENST00000343106 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
UBE2D3-203ENST00000343106 SPHKAPQ2M3C7 1700 aa12.81□□□□□ -0.36
UBE2D3-203ENST00000343106 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-203ENST00000343106 RAPGEF3O95398 923 aa12.8□□□□□ -0.36
UBE2D3-203ENST00000343106 STK26Q9P289 416 aa12.8□□□□□ -0.36
UBE2D3-203ENST00000343106 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
UBE2D3-203ENST00000343106 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-203ENST00000343106 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
UBE2D3-203ENST00000343106 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
UBE2D3-203ENST00000343106 TET3O43151 1660 aa12.79□□□□□ -0.36
UBE2D3-203ENST00000343106 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
UBE2D3-203ENST00000343106 CEP152O94986 1710 aa12.78□□□□□ -0.36
UBE2D3-203ENST00000343106 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-203ENST00000343106 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
UBE2D3-203ENST00000343106 ARAP3Q8WWN8 1544 aa12.77□□□□□ -0.36
UBE2D3-203ENST00000343106 VWDEQ8N2E2 1590 aa12.77□□□□□ -0.36
UBE2D3-203ENST00000343106 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.37
UBE2D3-203ENST00000343106 MYOM2P54296 1465 aa12.77□□□□□ -0.37
UBE2D3-203ENST00000343106 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 ABCA6Q8N139 1617 aa12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 MAP3K4Q9Y6R4 1608 aa12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 MYOM1P52179 1685 aa12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 NPATQ14207 1427 aa12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 PDE3AQ14432 1141 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms