RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 DZIP1LQ8IYY4 767 aaKnown RBP9.99□□□□□ -0.81
UBE4B-202ENST00000343090 NECTIN2Q92692 538 aa9.99□□□□□ -0.81
UBE4B-202ENST00000343090 COG3Q96JB2 828 aa9.99□□□□□ -0.81
UBE4B-202ENST00000343090 DDX11L8A8MPP1 907 aa9.98□□□□□ -0.81
UBE4B-202ENST00000343090 NRDCO43847 1150 aa9.98□□□□□ -0.81
UBE4B-202ENST00000343090 DIAPH1O60610 1272 aaKnown RBP9.98□□□□□ -0.81
UBE4B-202ENST00000343090 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
UBE4B-202ENST00000343090 NESP48681 1621 aa9.98□□□□□ -0.81
UBE4B-202ENST00000343090 ST18O60284 1047 aa9.98□□□□□ -0.81
UBE4B-202ENST00000343090 KIAA2012Q0VF49 1180 aa9.98□□□□□ -0.81
UBE4B-202ENST00000343090 RUNDC1Q96C34 613 aa9.98□□□□□ -0.81
UBE4B-202ENST00000343090 GGNBP2Q9H3C7 697 aa9.98□□□□□ -0.81
UBE4B-202ENST00000343090 HSP90B1P14625 803 aaKnown RBP9.98□□□□□ -0.81
UBE4B-202ENST00000343090 HMOX1P09601 288 aa9.97□□□□□ -0.81
UBE4B-202ENST00000343090 CABP2Q9NPB3 220 aa9.97□□□□□ -0.81
UBE4B-202ENST00000343090 EID1Q9Y6B2 187 aa9.97□□□□□ -0.81
UBE4B-202ENST00000343090 BRD4O60885 1362 aaPredicted RBP9.97□□□□□ -0.81
UBE4B-202ENST00000343090 TPM2P07951 284 aa9.97□□□□□ -0.81
UBE4B-202ENST00000343090 SYAP1Q96A49 352 aaPredicted RBP9.97□□□□□ -0.81
UBE4B-202ENST00000343090 TOP2BQ02880 1626 aa9.96□□□□□ -0.81
UBE4B-202ENST00000343090 CFAP70Q5T0N1 1121 aa9.96□□□□□ -0.81
UBE4B-202ENST00000343090 AFAP1Q8N556 730 aa9.96□□□□□ -0.81
UBE4B-202ENST00000343090 DDX19BQ9UMR2 479 aa9.96□□□□□ -0.81
UBE4B-202ENST00000343090 DDX49Q9Y6V7 483 aaKnown RBP9.96□□□□□ -0.81
UBE4B-202ENST00000343090 LNPKQ9C0E8 428 aa9.96□□□□□ -0.82
UBE4B-202ENST00000343090 TIAM1Q13009 1591 aa9.96□□□□□ -0.82
UBE4B-202ENST00000343090 GORABQ5T7V8 394 aa9.96□□□□□ -0.82
UBE4B-202ENST00000343090 GPATCH3Q96I76 525 aa9.96□□□□□ -0.82
UBE4B-202ENST00000343090 PPP2R1AP30153 589 aa9.95□□□□□ -0.82
UBE4B-202ENST00000343090 MIA2Q96PC5 1412 aa9.95□□□□□ -0.82
UBE4B-202ENST00000343090 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
UBE4B-202ENST00000343090 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.95□□□□□ -0.82
UBE4B-202ENST00000343090 MRE11P49959 708 aa9.94□□□□□ -0.82
UBE4B-202ENST00000343090 EIF2S2P20042 333 aaKnown RBP9.94□□□□□ -0.82
UBE4B-202ENST00000343090 MTHFSP49914 203 aa9.94□□□□□ -0.82
UBE4B-202ENST00000343090 HFM1A2PYH4 1435 aa9.94□□□□□ -0.82
UBE4B-202ENST00000343090 PRG4Q92954 1404 aaPredicted RBP9.93□□□□□ -0.82
UBE4B-202ENST00000343090 ISY1Q9ULR0 285 aaKnown RBP9.93□□□□□ -0.82
UBE4B-202ENST00000343090 CYB5RLQ6IPT4 315 aa9.93□□□□□ -0.82
UBE4B-202ENST00000343090 PNISRQ8TF01 805 aaKnown RBP9.93□□□□□ -0.82
UBE4B-202ENST00000343090 TCP11L2Q8N4U5 519 aa9.93□□□□□ -0.82
UBE4B-202ENST00000343090 BCAR3O75815 825 aa9.92□□□□□ -0.82
UBE4B-202ENST00000343090 R3HCC1Q9Y3T6 440 aaKnown RBP9.92□□□□□ -0.82
UBE4B-202ENST00000343090 TAF7LQ5H9L4 462 aa9.92□□□□□ -0.82
UBE4B-202ENST00000343090 NGEFQ8N5V2 710 aa9.92□□□□□ -0.82
UBE4B-202ENST00000343090 KIF16BQ96L93 1317 aa9.92□□□□□ -0.82
UBE4B-202ENST00000343090 C11orf95C9JLR9 678 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-202ENST00000343090 ARHGAP5Q13017 1502 aa9.91□□□□□ -0.82
UBE4B-202ENST00000343090 MAP7D2Q96T17 732 aa9.91□□□□□ -0.82
UBE4B-202ENST00000343090 KIAA1107Q9UPP5 1409 aa9.91□□□□□ -0.82
UBE4B-202ENST00000343090 C22orf23Q9BZE7 217 aa9.91□□□□□ -0.82
UBE4B-202ENST00000343090 SMG6Q86US8 1419 aaKnown RBP9.91□□□□□ -0.82
UBE4B-202ENST00000343090 SKOR2Q2VWA4 1001 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-202ENST00000343090 CHMP5Q9NZZ3 219 aa9.9□□□□□ -0.82
UBE4B-202ENST00000343090 EHBP1L1Q8N3D4 1523 aa9.9□□□□□ -0.82
UBE4B-202ENST00000343090 GRIN2BQ13224 1484 aa9.9□□□□□ -0.82
UBE4B-202ENST00000343090 HTATSF1O43719 755 aaKnown RBP9.9□□□□□ -0.82
UBE4B-202ENST00000343090 TNNT3P45378 269 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-202ENST00000343090 CHMP4AQ9BY43 222 aa9.9□□□□□ -0.83
UBE4B-202ENST00000343090 POLA1P09884 1462 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-202ENST00000343090 EFCAB5A4FU69 1503 aa9.89□□□□□ -0.83
UBE4B-202ENST00000343090 C9orf84Q5VXU9 1444 aa9.89□□□□□ -0.83
UBE4B-202ENST00000343090 TRAK2O60296 914 aa9.89□□□□□ -0.83
UBE4B-202ENST00000343090 ZNF771Q7L3S4 317 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-202ENST00000343090 TSR2Q969E8 191 aaKnown RBP9.89□□□□□ -0.83
UBE4B-202ENST00000343090 API5Q9BZZ5 524 aaKnown RBP9.89□□□□□ -0.83
UBE4B-202ENST00000343090 SLC12A5Q9H2X9 1139 aa9.89□□□□□ -0.83
UBE4B-202ENST00000343090 FKBP5Q13451 457 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-202ENST00000343090 TOPBP1Q92547 1522 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 TEFQ10587 303 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 HDAC5Q9UQL6 1122 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 NAIPQ13075 1403 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 EXOSC9Q06265 439 aaKnown RBP9.88□□□□□ -0.83
UBE4B-202ENST00000343090 ANO2Q9NQ90 1003 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 CDK13Q14004 1512 aaKnown RBP9.88□□□□□ -0.83
UBE4B-202ENST00000343090 DAPK1P53355 1430 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 NUTM2GQ5VZR2 741 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 SKAP1Q86WV1 359 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 C1orf115Q9H7X2 142 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
UBE4B-202ENST00000343090 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 C1orf141Q5JVX7 400 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 TOMM22Q9NS69 142 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 DIAPH3Q9NSV4 1193 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 GNAI1P63096 354 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 ESPNB1AK53 854 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 PHF14O94880 888 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 REC8O95072 547 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
UBE4B-202ENST00000343090 C9orf78Q9NZ63 289 aaPredicted RBP9.87□□□□□ -0.83
UBE4B-202ENST00000343090 TSPYL4Q9UJ04 414 aa9.87□□□□□ -0.83
UBE4B-202ENST00000343090 H3BQV1 296 aa9.86□□□□□ -0.83
UBE4B-202ENST00000343090 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
UBE4B-202ENST00000343090 MCTP1Q6DN14 999 aa9.86□□□□□ -0.83
UBE4B-202ENST00000343090 MTERF4Q7Z6M4 381 aaKnown RBP9.86□□□□□ -0.83
UBE4B-202ENST00000343090 PCF11O94913 1555 aaKnown RBP9.86□□□□□ -0.83
UBE4B-202ENST00000343090 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBE4B-202ENST00000343090 CREBRFQ8IUR6 639 aa9.85□□□□□ -0.83
UBE4B-202ENST00000343090 PRKAR2BP31323 418 aa9.85□□□□□ -0.83
UBE4B-202ENST00000343090 SF3A1Q15459 793 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms